##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935524.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 537744 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14436981165759 31.0 31.0 33.0 28.0 34.0 2 31.154610744145913 31.0 31.0 34.0 28.0 34.0 3 30.95024584188759 31.0 30.0 34.0 27.0 34.0 4 34.803265122437445 35.0 35.0 37.0 32.0 37.0 5 34.81587521199679 35.0 35.0 37.0 32.0 37.0 6 34.97770500461186 36.0 35.0 37.0 32.0 37.0 7 35.438965381296676 37.0 35.0 37.0 33.0 37.0 8 35.13931164271475 37.0 35.0 37.0 32.0 37.0 9 37.01407733047696 39.0 37.0 39.0 33.0 39.0 10 36.373575530363894 38.0 35.0 39.0 32.0 39.0 11 36.5872943259246 38.0 35.0 39.0 32.0 39.0 12 36.626519310303784 39.0 35.0 39.0 33.0 39.0 13 36.61522211312446 39.0 35.0 39.0 33.0 39.0 14 37.49875033473177 39.0 36.0 41.0 32.0 41.0 15 37.73298446844595 40.0 36.0 41.0 33.0 41.0 16 37.73311464191139 39.0 36.0 41.0 33.0 41.0 17 37.66337699723288 39.0 36.0 41.0 33.0 41.0 18 37.65520396322414 39.0 36.0 41.0 33.0 41.0 19 37.530932934630606 39.0 36.0 41.0 33.0 41.0 20 37.58589031211878 39.0 36.0 41.0 33.0 41.0 21 37.504107902645124 39.0 35.0 41.0 33.0 41.0 22 37.63854733851052 39.0 35.0 41.0 33.0 41.0 23 37.709744785622895 39.0 35.0 41.0 33.0 41.0 24 37.69179014549674 40.0 35.0 41.0 33.0 41.0 25 37.26206708024636 39.0 35.0 41.0 32.0 41.0 26 37.373201746555985 39.0 35.0 41.0 33.0 41.0 27 37.43461014906721 39.0 35.0 41.0 33.0 41.0 28 37.327191005385465 39.0 35.0 41.0 33.0 41.0 29 37.29186750572763 39.0 35.0 41.0 33.0 41.0 30 37.01453107798506 39.0 35.0 41.0 32.0 41.0 31 37.004760629593264 39.0 35.0 41.0 32.0 41.0 32 36.99523565116487 39.0 35.0 41.0 32.0 41.0 33 36.98891108036538 39.0 35.0 41.0 32.0 41.0 34 36.856258740218394 39.0 35.0 41.0 31.0 41.0 35 36.867516885358086 39.0 35.0 41.0 31.0 41.0 36 36.70358758070755 39.0 35.0 41.0 31.0 41.0 37 36.72758412925109 39.0 35.0 41.0 31.0 41.0 38 36.585468178166565 39.0 35.0 41.0 31.0 41.0 39 36.46101118747954 39.0 35.0 41.0 31.0 41.0 40 36.35208761046148 39.0 35.0 41.0 30.0 41.0 41 36.1594736528906 39.0 35.0 40.0 30.0 41.0 42 36.199529887827666 39.0 35.0 40.0 30.0 41.0 43 36.167471882531466 39.0 35.0 40.0 30.0 41.0 44 36.17404750215716 38.0 35.0 40.0 30.0 41.0 45 36.15367349519474 38.0 35.0 40.0 30.0 41.0 46 36.04449700972954 38.0 35.0 40.0 30.0 41.0 47 36.0232527001696 38.0 35.0 40.0 30.0 41.0 48 35.93567943110477 38.0 35.0 40.0 30.0 41.0 49 35.89237071915261 38.0 35.0 40.0 30.0 41.0 50 35.76800299027046 38.0 35.0 40.0 29.0 41.0 51 34.61587855931447 36.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 14.0 9 38.0 10 44.0 11 25.0 12 24.0 13 25.0 14 38.0 15 45.0 16 69.0 17 141.0 18 223.0 19 414.0 20 701.0 21 1128.0 22 1560.0 23 2133.0 24 2890.0 25 4082.0 26 4926.0 27 5909.0 28 6475.0 29 7690.0 30 9390.0 31 12143.0 32 16137.0 33 23886.0 34 42232.0 35 42317.0 36 45330.0 37 68295.0 38 113566.0 39 125834.0 40 17.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.755683001576955 20.00635990359725 23.261812312178286 11.976144782647506 2 34.07829747984171 24.08320687910976 23.921047933589218 17.91744770745931 3 33.349140111279716 23.745313755244133 26.37909488529858 16.52645124817757 4 29.249047874081345 24.671962867089174 26.088808057365586 19.990181201463894 5 26.11595852301467 28.98330804248862 24.78354012318129 20.11719331131542 6 25.790524859412656 34.456172453807014 24.69650986342944 15.056792823350888 7 77.42345800232081 6.413274718081466 10.926574727007647 5.23669255259008 8 77.59510101460918 7.031226754738314 10.014802582641554 5.358869648010949 9 71.79457139456693 7.935560415364932 12.245231931922996 8.02463625814514 10 42.675325061739414 24.748951173792737 17.98922907554524 14.58649468892261 11 32.864336933559464 24.438580439763157 24.311754292005116 18.38532833467226 12 30.22534886488738 21.63873516022494 28.590370138950878 19.545545835936803 13 27.383848076408107 22.38481507929424 30.447573566604184 19.783763277693474 14 21.97848790502544 26.433953702877204 30.622191972388347 20.965366419709007 15 20.51403641881639 24.63644410723318 34.28397155523818 20.565547918712248 16 24.902369900919396 24.1747002291053 30.145943050968487 20.77698681900681 17 24.83560950935761 24.162240768841677 28.228673867118925 22.77347585468178 18 26.033577315599988 24.08320687910976 28.515799339462646 21.367416465827603 19 25.963841530542414 26.32423606771996 26.48825463417537 21.22366776756226 20 26.831540658752118 26.240739087744352 27.371388616144486 19.55633163735904 21 25.611257401291322 26.850694754381266 29.106972834657384 18.431075009670028 22 23.979254068850604 23.926254872206847 29.475735666041835 22.61875539290071 23 23.605656223035496 25.439986313189923 29.49377398911006 21.460583474664524 24 24.01030973846291 25.09800202326758 28.32500223154512 22.56668600672439 25 24.1817667886578 25.853566009104707 26.486209051147014 23.478458151090482 26 22.369938111815287 25.892804010830435 27.409882769496264 24.327375107858014 27 23.02192121158023 25.0721532922729 28.68874408640543 23.21718140974144 28 21.061322859948227 26.820568895236395 28.17753429141004 23.940573953405337 29 23.795523520485585 25.920140438573004 28.2984096521765 21.985926388764916 30 24.36363771608795 24.71770954208694 27.831086911244014 23.087565830581095 31 24.155360171382664 25.241564759439434 26.46110416852629 24.14197090065161 32 25.50470112172335 26.5048052604957 26.086390550150256 21.904103067630697 33 25.342542176202805 25.539290071111903 26.3943437769645 22.723823975720787 34 22.70466988009164 25.511581719182363 29.60349162426731 22.180256776458688 35 23.168273379154396 27.014341396649705 27.35465202773067 22.46273319646523 36 24.332024160195186 28.264192626974914 25.357233181588263 22.046550031241633 37 23.095748162694516 27.408023148561394 26.72907554524086 22.767153143503226 38 22.692396381921508 27.675250676902017 25.90842482668333 23.72392811449314 39 23.700682852807283 24.973035496444403 27.654794846618465 23.671486804129845 40 24.449552203278884 24.29167038590854 28.91264244696361 22.346134963848968 41 21.753473771906336 25.59340504031658 27.611279716742537 25.041841471034544 42 22.97766223333036 24.983263411586183 28.380604897497697 23.658469457585767 43 23.11341456157577 24.56763813264304 27.907145407480137 24.41180189830105 44 22.493230979797076 24.15517420928918 27.552143771013714 25.799451039900028 45 22.586212026540508 23.302166086464933 27.340332946532182 26.77128894046238 46 22.276027254604422 25.930926239995237 27.12796423577018 24.665082269630158 47 21.527715790413282 25.342170252015826 29.75151745068285 23.378596506888037 48 21.62925109345711 25.465091195810647 28.844580320747422 24.061077389984824 49 23.03624029277872 23.99747835401232 29.281777202535036 23.684504150673927 50 20.57689160641495 24.949232348478088 29.53877681573388 24.935099229373083 51 20.859553988514982 24.193854324734446 28.059634324139367 26.88695736261121 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 368.0 1 647.0 2 926.0 3 2545.0 4 4164.0 5 2806.0 6 1448.0 7 1511.5 8 1575.0 9 1462.5 10 1350.0 11 1325.0 12 1300.0 13 1336.0 14 1372.0 15 1365.5 16 1359.0 17 1374.5 18 1390.0 19 1393.5 20 1397.0 21 1429.5 22 1462.0 23 1768.0 24 2074.0 25 2617.0 26 3488.5 27 3817.0 28 4699.5 29 5582.0 30 6324.5 31 7067.0 32 8482.0 33 9897.0 34 11247.0 35 12597.0 36 13514.0 37 14431.0 38 16044.0 39 17657.0 40 19593.0 41 21529.0 42 23267.5 43 25006.0 44 27513.5 45 30021.0 46 37484.5 47 44948.0 48 46089.0 49 47230.0 50 48621.5 51 50013.0 52 45023.5 53 40034.0 54 37192.0 55 34350.0 56 32332.0 57 30314.0 58 29271.5 59 28229.0 60 26938.0 61 25647.0 62 22920.0 63 20193.0 64 17725.0 65 15257.0 66 13144.0 67 11031.0 68 9311.0 69 7591.0 70 6141.0 71 4691.0 72 3850.5 73 3010.0 74 2533.0 75 1562.0 76 1068.0 77 850.0 78 632.0 79 430.0 80 228.0 81 205.0 82 182.0 83 115.5 84 49.0 85 36.5 86 24.0 87 14.5 88 5.0 89 5.0 90 5.0 91 5.5 92 6.0 93 3.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 537744.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.48822795537669 #Duplication Level Percentage of deduplicated Percentage of total 1 71.99016171602321 24.828131078066406 2 9.134914480011716 6.300940258790308 3 3.5786044130069943 3.7025917427370665 4 2.0240572334355216 2.7922458904581346 5 1.440994808094865 2.484867871204499 6 1.2037119406998784 2.490833508207977 7 1.0607036172108846 2.5607251700423124 8 0.9646078383145995 2.661409201226964 9 0.8240814224789386 2.557899715702025 >10 7.678379160966243 44.28268759193361 >50 0.0659769821891688 1.5104336650274683 >100 0.028353744411872578 1.7251890491734774 >500 0.002726321578064671 0.6361799164327309 >1k 0.002726321578064671 1.4658653409970845 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2372 0.44110208575084053 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC 1784 0.33175637478056474 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 1252 0.23282454104555328 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 1244 0.23133684429765836 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG 1143 0.21255467285548513 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 809 0.1504433336308727 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 700 0.13017346544080455 No Hit CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 696 0.1294296170668571 No Hit CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 656 0.12199113332738254 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8596209348686364E-4 0.0 0.0 0.1277559582254753 0.0 2 1.8596209348686364E-4 0.0 0.0 0.6008435240560565 0.0 3 1.8596209348686364E-4 0.0 0.0 0.8556115921330596 0.0 4 1.8596209348686364E-4 0.0 0.0 1.258591448719093 0.0 5 1.8596209348686364E-4 0.0 0.0 2.4169493290487667 0.0 6 1.8596209348686364E-4 0.0 0.0 3.142573417834509 0.0 7 1.8596209348686364E-4 0.0 0.0 3.74788003213425 0.0 8 1.8596209348686364E-4 0.0 0.0 4.647750602517183 0.0 9 1.8596209348686364E-4 0.0 0.0 5.0085170638816985 0.0 10 1.8596209348686364E-4 0.0 0.0 5.935724062007201 0.0 11 1.8596209348686364E-4 0.0 0.0 7.028437323336012 0.0 12 3.719241869737273E-4 0.0 0.0 8.08637567318278 0.0 13 3.719241869737273E-4 0.0 0.0 8.520969085661578 0.0 14 3.719241869737273E-4 0.0 0.0 8.726271236871076 0.0 15 3.719241869737273E-4 0.0 0.0 9.061560891427892 0.0 16 3.719241869737273E-4 0.0 0.0 9.614612157457824 0.0 17 3.719241869737273E-4 0.0 0.0 10.226241482936118 0.0 18 3.719241869737273E-4 0.0 0.0 10.884919218066589 0.0 19 3.719241869737273E-4 0.0 0.0 11.351870034812103 0.0 20 3.719241869737273E-4 0.0 0.0 11.80152637686334 0.0 21 3.719241869737273E-4 0.0 0.0 12.315339641167544 0.0 22 7.438483739474546E-4 0.0 0.0 12.830454640126156 0.0 23 7.438483739474546E-4 0.0 0.0 13.331808444166741 0.0 24 7.438483739474546E-4 0.0 0.0 13.734230414472314 0.0 25 7.438483739474546E-4 0.0 0.0 14.110059805409266 0.0 26 7.438483739474546E-4 0.0 0.0 14.498906542890298 0.0 27 7.438483739474546E-4 0.0 0.0 14.90969680740278 0.0 28 7.438483739474546E-4 0.0 0.0 15.290733136957362 0.0 29 7.438483739474546E-4 0.0 0.0 15.691667410515041 0.0 30 7.438483739474546E-4 0.0 0.0 16.2259365051028 0.0 31 9.298104674343182E-4 0.0 0.0 16.656066827337916 0.0 32 9.298104674343182E-4 0.0 0.0 17.0880567705079 0.0 33 9.298104674343182E-4 0.0 0.0 17.514467850873277 0.0 34 9.298104674343182E-4 0.0 0.0 17.96338034455057 0.0 35 9.298104674343182E-4 0.0 0.0 18.425310184771938 0.0 36 9.298104674343182E-4 0.0 0.0 18.830707548573297 0.0 37 9.298104674343182E-4 0.0 0.0 19.257490553125653 0.0 38 9.298104674343182E-4 0.0 0.0 19.77855633907584 0.0 39 9.298104674343182E-4 0.0 0.0 20.549555178672378 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 20 7.0299325E-4 45.000004 1 GTATGCG 25 3.8880265E-5 45.0 1 TTATGCG 30 2.1633386E-6 44.999996 1 CGCATAC 30 2.1633386E-6 44.999996 26 TACGAAT 70 0.0 41.785713 12 GCTACGA 70 0.0 41.785713 10 ACGGGTA 55 6.002665E-11 40.909092 5 TGCACGG 105 0.0 40.714287 2 TACACGG 45 1.9250365E-8 40.0 2 CGCGACC 115 0.0 39.130436 10 CTACGAA 75 0.0 39.0 11 TATTAGG 105 0.0 38.57143 2 CGGGTCC 35 6.2420895E-6 38.571426 6 GTCGATG 35 6.2420895E-6 38.571426 1 CCCGATC 35 6.2420895E-6 38.571426 41 TTACACG 270 0.0 38.333336 34 CGTTTTT 1250 0.0 37.98 1 TACCCTT 30 1.139114E-4 37.499996 30 AACCCGC 30 1.139114E-4 37.499996 21 TTAGTCG 30 1.139114E-4 37.499996 1 >>END_MODULE