##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935522.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 509673 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.188681762620348 31.0 31.0 33.0 28.0 34.0 2 31.244680412735224 31.0 31.0 34.0 28.0 34.0 3 30.952905097974583 31.0 31.0 34.0 27.0 34.0 4 34.73093140111405 35.0 35.0 37.0 32.0 37.0 5 34.82384195356631 35.0 35.0 37.0 33.0 37.0 6 35.050265562429246 36.0 35.0 37.0 32.0 37.0 7 35.4721988412178 37.0 35.0 37.0 33.0 37.0 8 35.4206756096556 37.0 35.0 37.0 33.0 37.0 9 37.43087430568227 39.0 37.0 39.0 34.0 39.0 10 36.61655806762375 38.0 35.0 39.0 32.0 39.0 11 36.80237524844361 39.0 37.0 39.0 32.0 39.0 12 37.034765428029345 39.0 37.0 39.0 33.0 39.0 13 37.18149676361118 39.0 37.0 39.0 34.0 39.0 14 38.275109727217256 40.0 38.0 41.0 34.0 41.0 15 38.475950266151045 40.0 38.0 41.0 34.0 41.0 16 38.40235602042878 40.0 38.0 41.0 34.0 41.0 17 38.308805842177236 40.0 38.0 41.0 34.0 41.0 18 38.21304051813614 39.0 38.0 41.0 34.0 41.0 19 38.01362442193328 39.0 37.0 41.0 34.0 41.0 20 38.050750186884535 39.0 37.0 41.0 34.0 41.0 21 37.97511541714001 39.0 36.0 41.0 34.0 41.0 22 38.08367129512452 40.0 37.0 41.0 34.0 41.0 23 38.1329950772358 40.0 37.0 41.0 34.0 41.0 24 38.11321769055846 40.0 37.0 41.0 34.0 41.0 25 37.67180329348425 39.0 36.0 41.0 33.0 41.0 26 37.80448640598972 40.0 36.0 41.0 33.0 41.0 27 37.87534948878987 40.0 36.0 41.0 34.0 41.0 28 37.7936637805024 40.0 36.0 41.0 33.0 41.0 29 37.7521116480567 40.0 36.0 41.0 33.0 41.0 30 37.43748835037367 40.0 36.0 41.0 33.0 41.0 31 37.32458262454554 39.0 36.0 41.0 33.0 41.0 32 37.192423377341946 40.0 36.0 41.0 32.0 41.0 33 37.03673531852776 40.0 36.0 41.0 31.0 41.0 34 36.840852860559615 40.0 36.0 41.0 31.0 41.0 35 36.810505951855404 40.0 36.0 41.0 31.0 41.0 36 36.63933934110695 40.0 36.0 41.0 30.0 41.0 37 36.63321973108248 40.0 36.0 41.0 30.0 41.0 38 36.49241964946152 40.0 36.0 41.0 30.0 41.0 39 36.40205582795243 40.0 35.0 41.0 30.0 41.0 40 36.36066850706237 40.0 35.0 41.0 29.0 41.0 41 36.21475141904711 39.0 35.0 41.0 29.0 41.0 42 36.22606651715904 39.0 35.0 41.0 29.0 41.0 43 36.19566074718496 39.0 35.0 41.0 29.0 41.0 44 36.18155366283872 39.0 35.0 41.0 29.0 41.0 45 36.16056962012898 39.0 35.0 41.0 28.0 41.0 46 36.04375550598129 39.0 35.0 41.0 28.0 41.0 47 36.03829121809474 39.0 35.0 41.0 28.0 41.0 48 35.956595699595624 39.0 35.0 41.0 28.0 41.0 49 35.929541097919646 39.0 35.0 41.0 27.0 41.0 50 35.84790051660575 39.0 35.0 41.0 27.0 41.0 51 34.769081352161095 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 15.0 10 16.0 11 8.0 12 13.0 13 5.0 14 9.0 15 20.0 16 44.0 17 85.0 18 167.0 19 298.0 20 547.0 21 836.0 22 1369.0 23 2136.0 24 3738.0 25 5826.0 26 7519.0 27 7583.0 28 7126.0 29 7015.0 30 7570.0 31 9104.0 32 11511.0 33 16043.0 34 25782.0 35 32129.0 36 38368.0 37 60807.0 38 117205.0 39 146737.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.17624241425385 21.19986736593855 24.321672915771487 16.30221730403612 2 37.120663641197396 21.337406533208547 24.72173334667522 16.820196478918838 3 29.612712464658713 22.15126169131973 32.337989259780294 15.898036584241268 4 25.829502445685765 25.25423163479329 31.0742377956062 17.842028123914748 5 23.592185577811655 28.985447532045054 29.69099795358985 17.731368936553437 6 24.074259378071822 32.1015631591236 29.193424018929786 14.630753443874797 7 78.12911415750884 4.494450363272137 13.164323007104556 4.212112472114474 8 80.4313746264762 3.473207330974958 12.235884576973865 3.8595334655749864 9 74.14126312361063 6.923851175165254 14.085501880617574 4.849383820606546 10 31.918504609818456 36.745324943640334 19.99733162243242 11.338838824108793 11 21.21497509187263 25.080787092900742 36.0953003200091 17.60893749521752 12 20.614001526468932 23.364588667635918 37.134005529035285 18.88740427685987 13 20.65500821114715 24.501003584651336 37.97474066705515 16.869247537146368 14 18.282899035263785 27.629872486869033 35.42428184345649 18.66294663441069 15 17.083502559484216 27.90122294098373 37.61804137162455 17.3972331279075 16 20.59477351164374 27.995793381246408 34.016320268093466 17.39311283901639 17 20.65952090850408 26.494046182552346 32.801227453681086 20.04520545526249 18 20.940092961565554 26.072599490261407 34.68753494887899 18.299772599294055 19 19.85410253240803 27.921824385439294 33.041773843228896 19.18229923892378 20 20.784895413333647 27.522941179933014 33.37885271536848 18.313310691364855 21 20.639115668281427 27.36676261053656 34.53802732340148 17.45609439778054 22 20.74231909479215 24.44174990631248 34.00023152099483 20.815699477900537 23 18.412786237450288 26.64943993501716 34.15346702689764 20.784306800634916 24 18.486951437490312 26.045327101886894 35.48314311332953 19.984578347293265 25 18.878575086378913 28.248700637467554 32.461401722280755 20.411322553872775 26 18.928607165770995 28.574007255632534 32.08841747551862 20.408968103077857 27 19.931210795941713 27.172716624188446 33.01450145485439 19.88157112501545 28 18.17636013679359 26.790314574246626 33.985712407759486 21.047612881200298 29 18.487736254421954 25.117673488687846 33.162243242235704 23.232347014654493 30 20.438398738014374 25.364890822154596 32.40567972013429 21.791030719696746 31 19.65593625716881 26.361412121105097 32.30228008939065 21.68037153233544 32 19.31355987074065 26.874093781699248 31.247289929032927 22.565056418527174 33 19.49347915231923 26.378678093601195 30.657892413370924 23.46995034070865 34 17.988004073199875 26.231524918918602 32.63327663031002 23.147194377571502 35 18.185581735740367 27.34694598301264 30.72460185256037 23.742870428686626 36 19.42578869196524 28.32384685867213 30.264502926386132 21.985861522976496 37 18.657845324355026 27.760936914452994 32.64033998269479 20.940877778497192 38 18.33626658661534 28.563804635521205 30.703215591173166 22.396713186690288 39 19.26097713632074 26.937467748929215 30.420681495782592 23.380873618967453 40 19.99321133354131 26.665921090581605 31.65559093771889 21.68527663815819 41 18.82893541545265 28.08133842679522 30.663582336125316 22.426143821626805 42 20.23846662467896 27.980685655312325 30.424213171974973 21.35663454803374 43 20.484899141214072 27.034785048452637 30.634936518120444 21.84537929221285 44 20.175288861681903 26.256639060731096 29.954304034155232 23.61376804343177 45 20.08954761190018 25.06077426114391 29.89897444047458 24.950703686481333 46 20.905757220806283 25.491442552381628 30.14422973161223 23.45857049519986 47 18.94901240599365 26.282341815242322 31.862978811904892 22.905666966859144 48 19.029259937253887 26.27665189248793 31.74937656104993 22.944711609208255 49 20.119959268001246 25.07352753628307 31.852383783327742 22.954129412387942 50 19.08243128437253 24.733113192184007 31.946758019357507 24.237697504085954 51 18.471843711556232 24.644428878908634 30.71400682398322 26.169720585551914 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 266.0 2 380.0 3 4487.5 4 8595.0 5 5949.0 6 3303.0 7 3275.5 8 3248.0 9 3249.0 10 3250.0 11 3249.0 12 3248.0 13 3124.0 14 3000.0 15 2937.5 16 2875.0 17 2884.5 18 2894.0 19 2692.0 20 2490.0 21 2556.0 22 2622.0 23 2878.5 24 3135.0 25 3544.0 26 4795.0 27 5637.0 28 6839.5 29 8042.0 30 9189.5 31 10337.0 32 12235.5 33 14134.0 34 15641.5 35 17149.0 36 18470.5 37 19792.0 38 21395.5 39 22999.0 40 25452.5 41 27906.0 42 30579.5 43 33253.0 44 35526.0 45 37799.0 46 44248.5 47 50698.0 48 53335.0 49 55972.0 50 53038.5 51 50105.0 52 42771.5 53 35438.0 54 30525.0 55 25612.0 56 21533.5 57 17455.0 58 14765.0 59 12075.0 60 10224.5 61 8374.0 62 7221.5 63 6069.0 64 4837.5 65 3606.0 66 2763.5 67 1921.0 68 1436.0 69 951.0 70 761.5 71 572.0 72 441.0 73 310.0 74 235.5 75 129.5 76 98.0 77 64.0 78 30.0 79 21.0 80 12.0 81 14.0 82 16.0 83 8.5 84 1.0 85 1.0 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 509673.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.529756940745635 #Duplication Level Percentage of deduplicated Percentage of total 1 74.87038776490687 31.842193937008652 2 9.296812018696352 7.907823109579171 3 3.604428729216976 4.59886433291516 4 2.099046702328374 3.5708778422919765 5 1.5044116950591233 3.1991131864839826 6 1.2110577640860234 3.0903595408668867 7 0.9881159105338296 2.941703065300113 8 0.8459212750706105 2.8781460975806956 9 0.7347469888941847 2.8123749765552963 >10 4.778572699834134 31.73598639978772 >50 0.04789748595465342 1.3543538492992098 >100 0.013485699928710942 1.1186076769151514 >500 0.0027901448128367467 0.9075832088690999 >1k 0.0018600965418911644 1.008645536115147 >5k 4.650241354727911E-4 1.0333672404316947 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5225 1.0251671169553813 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTT 1512 0.29666080016010266 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTG 1309 0.2568313408793481 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC 1208 0.23701471335542593 No Hit GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 1071 0.21013473344673939 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCT 987 0.19365357788228924 No Hit CCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 945 0.18541300010006417 No Hit CGTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCT 804 0.15774820325973712 No Hit CTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGCT 765 0.15009623817624243 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCC 582 0.11419086355369032 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15539375246481568 0.0 2 0.0 0.0 0.0 0.7037845834486033 0.0 3 0.0 0.0 0.0 1.1795798482556463 0.0 4 0.0 0.0 0.0 1.7611291946012444 0.0 5 0.0 0.0 0.0 3.1845909043641707 0.0 6 0.0 0.0 0.0 4.44951959393572 0.0 7 0.0 0.0 0.0 5.446237097119133 0.0 8 0.0 0.0 0.0 6.78945127562182 0.0 9 0.0 0.0 0.0 7.360994206089003 0.0 10 0.0 0.0 0.0 8.42893384581879 0.0 11 0.0 0.0 0.0 9.85926270373357 0.0 12 0.0 0.0 0.0 11.031975403837363 0.0 13 0.0 0.0 0.0 11.552897642213733 0.0 14 0.0 0.0 0.0 11.790500968267889 0.0 15 0.0 0.0 0.0 12.136801439354253 0.0 16 0.0 0.0 0.0 12.791731168808235 0.0 17 0.0 0.0 0.0 13.703099830675747 0.0 18 0.0 0.0 0.0 14.660968895742958 0.0 19 0.0 0.0 0.0 15.310601110908367 0.0 20 0.0 0.0 0.0 15.90019483080328 0.0 21 0.0 0.0 0.0 16.590637526413996 0.0 22 0.0 0.0 0.0 17.359954323654577 0.0 23 0.0 0.0 0.0 18.12318878967495 0.0 24 1.962042329101208E-4 0.0 0.0 18.69375069897758 0.0 25 1.962042329101208E-4 0.0 0.0 19.20957162729829 0.0 26 1.962042329101208E-4 0.0 0.0 19.692037836024273 0.0 27 1.962042329101208E-4 0.0 0.0 20.18725731988942 0.0 28 3.924084658202416E-4 0.0 0.0 20.713673276787272 0.0 29 3.924084658202416E-4 0.0 0.0 21.2763870167735 0.0 30 5.886126987303624E-4 0.0 0.0 21.961335993862733 0.0 31 5.886126987303624E-4 0.0 0.0 22.530524473534992 0.0 32 7.848169316404832E-4 0.0 0.0 23.07832669182005 0.0 33 7.848169316404832E-4 0.0 0.0 23.608078120677376 0.0 34 7.848169316404832E-4 0.0 0.0 24.137437141068883 0.0 35 7.848169316404832E-4 0.0 0.0 24.681707683161555 0.0 36 7.848169316404832E-4 0.0 0.0 25.2234275702264 0.0 37 7.848169316404832E-4 0.0 0.0 25.763577823427962 0.0 38 7.848169316404832E-4 0.0 0.0 26.27861393481703 0.0 39 7.848169316404832E-4 0.0 0.0 26.85094168221585 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTACGA 30 2.163115E-6 45.000004 10 TTGCACG 35 1.2101555E-7 45.000004 1 TCTTGCG 20 7.029587E-4 45.0 1 GCGCTAG 20 7.029587E-4 45.0 1 CGTTTTT 3450 0.0 44.086956 1 CGACAGG 75 0.0 42.0 2 AGCGACT 120 0.0 41.250004 19 TAGGGCG 115 0.0 41.086956 5 TACGGGA 275 0.0 40.909092 4 GCGATCA 55 6.002665E-11 40.909092 9 CGTCAGG 55 6.002665E-11 40.909092 2 CTAACGG 50 1.0786607E-9 40.5 2 AAGGGCG 145 0.0 40.34483 5 CGTAAGG 125 0.0 39.600002 2 GGCGTTA 40 3.4531695E-7 39.375 9 TTCGTAG 40 3.4531695E-7 39.375 1 TAGTGCG 40 3.4531695E-7 39.375 1 TAACGGG 155 0.0 39.193546 3 CGTGGGT 35 6.2414456E-6 38.57143 4 CGAACGG 35 6.2414456E-6 38.57143 2 >>END_MODULE