##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935521.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 124661 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13601687777252 31.0 31.0 33.0 28.0 34.0 2 31.135335028597556 31.0 31.0 34.0 28.0 34.0 3 30.92854220646393 31.0 30.0 34.0 27.0 34.0 4 34.74257386030916 35.0 35.0 37.0 32.0 37.0 5 34.774532532227404 35.0 35.0 37.0 32.0 37.0 6 34.97162705256656 36.0 35.0 37.0 32.0 37.0 7 35.38854974691363 37.0 35.0 37.0 33.0 37.0 8 35.186465694964745 37.0 35.0 37.0 32.0 37.0 9 36.95081862009771 39.0 37.0 39.0 32.0 39.0 10 36.41160427078236 37.0 35.0 39.0 32.0 39.0 11 36.6254562373156 38.0 35.0 39.0 32.0 39.0 12 36.51741924098154 38.0 35.0 39.0 33.0 39.0 13 36.39666776297318 39.0 35.0 39.0 32.0 39.0 14 37.37727918113925 39.0 36.0 41.0 32.0 41.0 15 37.60643665621165 39.0 36.0 41.0 33.0 41.0 16 37.62811945997545 39.0 36.0 41.0 33.0 41.0 17 37.51290299291679 39.0 35.0 41.0 33.0 41.0 18 37.53833997802039 39.0 36.0 40.0 33.0 41.0 19 37.41751630421704 39.0 36.0 40.0 33.0 41.0 20 37.42763173727148 39.0 35.0 40.0 33.0 41.0 21 37.43289400855119 39.0 35.0 40.0 33.0 41.0 22 37.57183080514355 39.0 35.0 41.0 33.0 41.0 23 37.62879328739542 39.0 35.0 41.0 33.0 41.0 24 37.64102646376974 39.0 35.0 41.0 33.0 41.0 25 37.287347285839196 39.0 35.0 41.0 33.0 41.0 26 37.373027650989485 39.0 35.0 41.0 33.0 41.0 27 37.36337747972502 39.0 35.0 41.0 33.0 41.0 28 37.24819309968635 39.0 35.0 41.0 33.0 41.0 29 37.22210635242779 39.0 35.0 41.0 33.0 41.0 30 37.01421454985922 39.0 35.0 41.0 32.0 41.0 31 36.98434955599586 39.0 35.0 41.0 32.0 41.0 32 36.9599473772872 39.0 35.0 41.0 32.0 41.0 33 36.86448047103745 39.0 35.0 41.0 32.0 41.0 34 36.71332654158077 39.0 35.0 41.0 31.0 41.0 35 36.8254947417396 39.0 35.0 41.0 32.0 41.0 36 36.675576162552844 39.0 35.0 41.0 31.0 41.0 37 36.64012802720979 39.0 35.0 41.0 31.0 41.0 38 36.49977940173751 39.0 35.0 41.0 31.0 41.0 39 36.44982793335526 39.0 35.0 40.0 31.0 41.0 40 36.359366602225236 39.0 35.0 40.0 30.0 41.0 41 36.15582259086643 38.0 35.0 40.0 30.0 41.0 42 36.2782105068947 39.0 35.0 40.0 30.0 41.0 43 36.21364340090325 38.0 35.0 40.0 30.0 41.0 44 36.2126888120583 38.0 35.0 40.0 30.0 41.0 45 36.22922164911239 38.0 35.0 40.0 30.0 41.0 46 36.13243917504271 38.0 35.0 40.0 30.0 41.0 47 36.05214942925213 38.0 35.0 40.0 30.0 41.0 48 36.0508819919622 38.0 35.0 40.0 30.0 41.0 49 36.045667851212485 38.0 35.0 40.0 30.0 41.0 50 35.888040365471156 38.0 35.0 40.0 30.0 41.0 51 34.67107595799809 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 2.0 11 9.0 12 4.0 13 4.0 14 5.0 15 10.0 16 9.0 17 18.0 18 32.0 19 67.0 20 141.0 21 270.0 22 419.0 23 519.0 24 717.0 25 921.0 26 1117.0 27 1328.0 28 1417.0 29 1608.0 30 2019.0 31 2789.0 32 3763.0 33 5564.0 34 11044.0 35 11895.0 36 9737.0 37 14491.0 38 25767.0 39 28958.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.28218127561948 20.674469160362904 23.585564049702796 12.457785514314821 2 30.67599329381282 27.72478962947514 24.90674709813013 16.692469978581915 3 29.139025035897355 28.007155405459606 27.140805865507257 15.713013693135785 4 28.01437498495921 23.449194214710296 31.75491934125348 16.781511459077016 5 27.107114494509112 27.894850835465785 24.447902712155365 20.550131957869745 6 21.965169539791916 36.12517146501312 26.190227898059536 15.71943109713543 7 73.68623707494726 5.218151627213001 15.491613255147962 5.603998042691781 8 73.21536005647316 8.099566023054523 11.394100801373325 7.290973119098997 9 68.61007051122645 6.376493049149293 13.264774067270437 11.748662372353824 10 42.305131516673214 24.767168561137805 18.262327431995573 14.665372490193404 11 32.45762507921483 22.31251153127281 26.06428634456646 19.165577044945895 12 27.590024145482552 18.624108582475674 32.56832529820875 21.217541973833036 13 23.48288558570844 24.96931678712669 34.0836348176254 17.46416280953947 14 17.53475425353559 30.72091512181035 29.880235197856585 21.864095426797476 15 15.61434610664121 24.288269787664145 40.96630060724685 19.13108349844779 16 17.744924234524028 24.312335052662824 33.49724452715765 24.445496185655497 17 17.55240211453462 23.99948660768003 30.72171729731031 27.726393980475052 18 20.850947770353198 22.966284563736856 32.598807967207065 23.583959698702884 19 20.51964928887142 26.81913349002495 28.307169042443103 24.354048178660527 20 24.568229037148747 25.503565670097306 29.919541797354427 20.008663495399524 21 21.703660326806297 29.329942804886855 29.833709018859146 19.132687849447702 22 18.19494468999928 24.062056296676587 31.376292505274307 26.36670650804983 23 19.063700756451496 27.146421094006946 28.263049389945532 25.526828759596025 24 22.79542118224625 23.098643521229576 29.728624028364926 24.37731126815925 25 16.860124658072692 28.83580269691403 27.367019356494815 26.937053288518463 26 16.548078388589857 26.44130882954573 32.1255244222331 24.885088359631318 27 20.054387498897007 27.78575496747178 28.62563271592559 23.534224817705617 28 17.84439399651856 26.085142907565317 33.518101090156506 22.552362005759623 29 20.898276124850597 22.298072372273605 33.568638146653726 23.235013356222076 30 20.279798814384613 27.64938513247928 30.144150937342072 21.926665115794034 31 26.6145787375362 26.739718115529314 24.254578416665996 22.391124730268487 32 29.510432292376926 27.061390491011622 23.93531256768356 19.492864648927892 33 23.88798421318616 27.518630525986477 23.067358676731295 25.52602658409607 34 22.29486367027378 26.809507384025476 29.100520611899473 21.79510833380127 35 22.454496594765004 28.163579627951002 25.985673145570786 23.396250631713205 36 24.417420043157044 28.9545246709075 27.135190637007568 19.492864648927892 37 23.918466882184482 28.73713511041946 28.664137139923472 18.680260867472587 38 24.602722583646848 27.3581954259953 23.0272499017335 25.01183208862435 39 25.065577847121396 26.23835842805689 26.933042411018683 21.763021313803034 40 24.123021634673233 23.698670795196573 27.689493907477075 24.488813662653115 41 19.373340499434466 28.9745790584064 25.697692141086627 25.954388301072505 42 24.654863991143984 24.54657029864994 27.19695815050417 23.60160755970191 43 25.42816117310145 24.91797755512951 25.894225138575816 23.759636133193222 44 21.93388469529364 25.29500004010877 26.91860325201948 25.85251201257811 45 21.5472361043149 23.604816261701735 26.024979745068627 28.822967888914736 46 25.86294029407754 25.7963597275812 26.11161469906386 22.2290852792774 47 19.437514539430936 24.79604687913622 31.968298024241744 23.798140557191104 48 22.480166210763592 23.654551142699 28.433912771436137 25.43136987510127 49 22.793816831246343 20.627942981365464 33.21568092667314 23.36255926071506 50 21.276902960829773 22.254754895275987 30.903008960300333 25.565333183593907 51 20.218031300888008 22.272402756275017 27.07021442151114 30.439351521325836 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 147.5 2 214.0 3 586.5 4 959.0 5 629.5 6 300.0 7 307.0 8 314.0 9 295.0 10 276.0 11 299.0 12 322.0 13 308.5 14 295.0 15 286.5 16 278.0 17 283.5 18 289.0 19 257.5 20 226.0 21 277.5 22 329.0 23 372.0 24 415.0 25 541.5 26 697.5 27 727.0 28 716.5 29 706.0 30 952.5 31 1199.0 32 1426.5 33 1654.0 34 2152.0 35 2650.0 36 2609.5 37 2569.0 38 3006.5 39 3444.0 40 4108.5 41 4773.0 42 6061.5 43 7350.0 44 8110.5 45 8871.0 46 13537.5 47 18204.0 48 16947.0 49 15690.0 50 15327.5 51 14965.0 52 12347.0 53 9729.0 54 8257.0 55 6785.0 56 6004.5 57 5224.0 58 4731.0 59 4238.0 60 4088.5 61 3939.0 62 3268.5 63 2598.0 64 2236.5 65 1875.0 66 1446.0 67 1017.0 68 829.0 69 641.0 70 473.5 71 306.0 72 295.0 73 284.0 74 192.0 75 90.0 76 80.0 77 66.5 78 53.0 79 30.0 80 7.0 81 11.5 82 16.0 83 8.0 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 124661.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.83795252725391 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24799151427057 30.729739052309863 2 10.512875915849849 8.586486551527743 3 3.545542045610796 4.343780332261092 4 1.756074564418865 2.868579587842228 5 1.1255377241745075 2.2982328073735974 6 0.8878587283191577 2.1754999558803476 7 0.7307155905635546 2.0888650018851123 8 0.6266082618004676 2.0471518758874065 9 0.5833938989176766 2.144215111382068 >10 4.889115873421203 32.8290323356944 >50 0.06089296588029622 1.7816317854020103 >100 0.019642892219450394 2.2099935023784503 >500 0.0058928676658351175 1.3789396844241584 >1k 0.007857156887780157 4.517852415751518 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTC 1676 1.3444461379260555 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGC 1473 1.1816045114350118 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCG 1305 1.0468390274424237 No Hit GCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 1178 0.9449627389480272 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 650 0.5214140749713222 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 544 0.4363834719759989 No Hit CTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGCT 525 0.42114213747683715 Illumina Single End Adapter 1 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTT 419 0.3361115344815139 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGGCAGAT 340 0.2727396699849993 No Hit GAACTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCT 337 0.27033314348513166 No Hit GAATGACTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCT 323 0.25910268648574936 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTAGGCAGATCGTA 287 0.23022436848733766 No Hit TCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 274 0.2197960869879112 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTC 236 0.18931341798958776 No Hit ACTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTGC 194 0.15562204699144078 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCC 179 0.14358941449210258 No Hit CGCTGTCTCTTATACACATCTGACGCTAGGCAGATCGTATGCCGTCTTCTG 166 0.13316113299267615 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4387899984758665 0.0 2 0.0 0.0 0.0 2.386472112368744 0.0 3 0.0 0.0 0.0 3.0193885818339337 0.0 4 0.0 0.0 0.0 4.1239842452731805 0.0 5 0.0 0.0 0.0 7.368784142594717 0.0 6 0.0 0.0 0.0 8.771789092017551 0.0 7 0.0 0.0 0.0 10.084148209945372 0.0 8 0.0 0.0 0.0 12.151354473331676 0.0 9 0.0 0.0 0.0 12.83801670129391 0.0 10 0.0 0.0 0.0 15.344012963156079 0.0 11 0.0 0.0 0.0 17.493041127537882 0.0 12 0.0 0.0 0.0 20.491573146372964 0.0 13 0.0 0.0 0.0 21.386801004323726 0.0 14 0.0 0.0 0.0 21.848051916798358 0.0 15 0.0 0.0 0.0 22.578031621758207 0.0 16 0.0 0.0 0.0 23.59438798020231 0.0 17 0.0 0.0 0.0 24.791233826136484 0.0 18 0.0 0.0 0.0 26.260819342055655 0.0 19 0.0 0.0 0.0 27.351778021995653 0.0 20 0.0 0.0 0.0 28.112240395953826 0.0 21 0.0 0.0 0.0 29.038753098402868 0.0 22 0.0 0.0 0.0 29.93077225435381 0.0 23 0.0 0.0 0.0 30.797121794306157 0.0 24 0.0 0.0 0.0 31.48217967126848 0.0 25 0.0 0.0 0.0 32.065361259736406 0.0 26 0.0 0.0 0.0 32.615653652706136 0.0 27 0.0 0.0 0.0 33.151506886676664 0.0 28 0.0 0.0 0.0 33.72746889564499 0.0 29 0.0 0.0 0.0 34.27294823561499 0.0 30 0.0 0.0 0.0 34.8817994400815 0.0 31 0.0 0.0 0.0 35.47781583654872 0.0 32 0.0 0.0 0.0 36.023295176518715 0.0 33 0.0 0.0 0.0 36.596048483487216 0.0 34 0.0 0.0 0.0 37.160780035456156 0.0 35 0.0 0.0 0.0 37.74957685242377 0.0 36 0.0 0.0 0.0 38.26216699689558 0.0 37 0.0 0.0 0.0 38.78438324736686 0.0 38 0.0 0.0 0.0 39.380399643834075 0.0 39 0.0 0.0 0.0 39.97400951380143 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGCG 20 7.0090813E-4 45.0 2 AGATAAC 25 3.8707563E-5 45.0 15 CGACGGG 20 7.0090813E-4 45.0 3 CATGCGG 20 7.0090813E-4 45.0 2 GGCACCG 20 7.0090813E-4 45.0 8 TCGGGCA 25 3.8707563E-5 45.0 5 AATGGGC 20 7.0090813E-4 45.0 4 CAATTAC 20 7.0090813E-4 45.0 27 AGGGTAT 20 7.0090813E-4 45.0 6 TACGGGA 40 6.73208E-9 45.0 4 CGACAGG 20 7.0090813E-4 45.0 2 TGCGGGC 20 7.0090813E-4 45.0 4 GGCTTCC 20 7.0090813E-4 45.0 8 TCAATGG 25 3.8707563E-5 45.0 2 TGACCCA 20 7.0090813E-4 45.0 11 CGGGCAA 20 7.0090813E-4 45.0 6 GGAGTTG 20 7.0090813E-4 45.0 9 TCCAACC 20 7.0090813E-4 45.0 36 AATTACC 20 7.0090813E-4 45.0 28 TGGGCAC 20 7.0090813E-4 45.0 6 >>END_MODULE