##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935520.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 445999 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.193406263242743 31.0 31.0 33.0 28.0 34.0 2 31.18664167408447 31.0 31.0 34.0 28.0 34.0 3 30.965105302926688 31.0 31.0 34.0 27.0 34.0 4 34.77226630552983 35.0 35.0 37.0 32.0 37.0 5 34.81707133872497 35.0 35.0 37.0 33.0 37.0 6 35.025816201381616 36.0 35.0 37.0 32.0 37.0 7 35.42831486169251 37.0 35.0 37.0 33.0 37.0 8 35.18329637510398 37.0 35.0 37.0 32.0 37.0 9 37.063015836358375 39.0 37.0 39.0 33.0 39.0 10 36.450891145495845 38.0 35.0 39.0 32.0 39.0 11 36.740550987782484 39.0 37.0 39.0 32.0 39.0 12 36.89067015845327 39.0 37.0 39.0 33.0 39.0 13 36.9617241294263 39.0 37.0 39.0 33.0 39.0 14 38.05392837203671 40.0 37.0 41.0 33.0 41.0 15 38.2074219897354 40.0 37.0 41.0 34.0 41.0 16 38.1477940533499 40.0 37.0 41.0 34.0 41.0 17 38.03920412377606 40.0 37.0 41.0 33.0 41.0 18 37.97680712288592 39.0 37.0 41.0 33.0 41.0 19 37.81369464953957 39.0 37.0 41.0 33.0 41.0 20 37.852241821170004 39.0 36.0 41.0 34.0 41.0 21 37.81194352453705 39.0 36.0 41.0 33.0 41.0 22 37.932807024230996 40.0 36.0 41.0 33.0 41.0 23 37.968634458821654 40.0 36.0 41.0 34.0 41.0 24 37.95244159740268 40.0 36.0 41.0 34.0 41.0 25 37.55691828905446 39.0 36.0 41.0 33.0 41.0 26 37.65288711409667 39.0 36.0 41.0 33.0 41.0 27 37.69988721947807 40.0 36.0 41.0 33.0 41.0 28 37.58493853125231 40.0 36.0 41.0 33.0 41.0 29 37.51643165119204 40.0 36.0 41.0 33.0 41.0 30 37.246063331980565 39.0 35.0 41.0 32.0 41.0 31 37.21174486938312 39.0 35.0 41.0 32.0 41.0 32 37.15610797333626 39.0 35.0 41.0 32.0 41.0 33 37.05661671887157 40.0 35.0 41.0 32.0 41.0 34 36.89943475209586 40.0 35.0 41.0 31.0 41.0 35 36.88444144493597 40.0 35.0 41.0 31.0 41.0 36 36.727685488084056 40.0 35.0 41.0 31.0 41.0 37 36.7343872968325 40.0 35.0 41.0 31.0 41.0 38 36.578907127594455 39.0 35.0 41.0 30.0 41.0 39 36.47893829358362 39.0 35.0 41.0 30.0 41.0 40 36.390525539294934 39.0 35.0 41.0 30.0 41.0 41 36.21236146269386 39.0 35.0 41.0 30.0 41.0 42 36.26099385873062 39.0 35.0 41.0 30.0 41.0 43 36.2152695409631 39.0 35.0 41.0 30.0 41.0 44 36.21112154959989 39.0 35.0 41.0 30.0 41.0 45 36.17800264126153 39.0 35.0 41.0 30.0 41.0 46 36.048870064731084 39.0 35.0 41.0 29.0 41.0 47 36.01153141598972 39.0 35.0 41.0 29.0 41.0 48 35.955789138540666 39.0 35.0 40.0 29.0 41.0 49 35.9186993692811 39.0 35.0 40.0 29.0 41.0 50 35.799672196574434 39.0 35.0 40.0 28.0 41.0 51 34.63158886006471 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 19.0 10 24.0 11 13.0 12 16.0 13 23.0 14 19.0 15 25.0 16 46.0 17 80.0 18 151.0 19 265.0 20 523.0 21 872.0 22 1312.0 23 1859.0 24 2678.0 25 3992.0 26 5042.0 27 5711.0 28 5783.0 29 6216.0 30 7198.0 31 9035.0 32 11558.0 33 16284.0 34 28361.0 35 32388.0 36 35825.0 37 55327.0 38 98226.0 39 117097.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.58798562328615 20.44690683162967 23.329424505436112 14.63568303964807 2 34.50949441590676 24.96889006477593 23.962161350137556 16.55945416917975 3 30.90298408740827 24.410368633113528 29.120020448476343 15.566626831001864 4 27.411720654082185 24.488619929641096 29.6361651035092 18.463494312767516 5 25.317993986533605 28.628315310124012 27.045800551122312 19.00789015222007 6 24.22404534539315 34.41375429092891 26.652301910990833 14.709898452687115 7 75.35218688831141 5.611895990798186 13.917295778690086 5.118621342200319 8 76.15196446628804 7.007639030580787 11.609667286249522 5.230729216881652 9 69.91002221978077 7.630510382310273 14.014605413913483 8.44486198399548 10 36.324296691248186 29.22988616566405 20.450270067870107 13.995547075217656 11 27.117549590918365 25.009473115410575 29.162845656604613 18.710131637066453 12 25.57359994080704 21.12381417895556 32.92541014665952 20.37717573357788 13 23.60520987715219 22.702741485967458 34.42496507839704 19.267083558483314 14 18.94690346839343 28.36306807862798 31.278769683340098 21.411258769638497 15 17.790847064679518 25.636828782127314 36.65008217507214 19.92224197812103 16 20.307220419776726 25.91059621209913 32.921822694669714 20.860360673454426 17 20.333229446702795 25.345348307955845 31.060831974959584 23.260590270381773 18 21.5848017596452 25.617546227682126 31.30926302525342 21.488388987419256 19 22.09018405870865 26.973378864078168 29.129437509949575 21.806999567263606 20 24.312610566391406 26.06328713741511 30.008811678949954 19.615290617243534 21 23.133908371991865 27.351406617503628 30.231009486568354 19.283675523936154 22 20.91193029580784 25.377859591613433 29.858362911127607 23.851847201451122 23 20.552064018080756 26.815306760777492 30.73908237462416 21.89354684651759 24 21.771573478864305 24.482341888658944 30.87787192347965 22.868212708997106 25 21.05744631714421 27.43481487626654 28.42203682071036 23.08570198587889 26 20.146233511734334 27.378088291677784 29.28033470927065 23.195343487317235 27 21.40811974914742 27.495801560093184 28.958136677436496 22.1379420133229 28 18.991073971017872 28.048717598021522 30.88639212195543 22.073816309005174 29 20.81349958183763 27.2296574655997 29.63751039800538 22.3193325545573 30 21.973816084789426 27.87898627575398 29.21486371045675 20.932333928999842 31 22.145116917302506 27.56104834315772 28.22517539276994 22.068659346769838 32 24.527633470030203 28.709929842892024 26.66687593469941 20.09556075237837 33 24.323597138110177 27.05835663308662 26.981002199556503 21.637044029246702 34 22.622472247695622 26.546472077291654 28.233247159746995 22.59780851526573 35 23.019109908318182 27.14804293283169 27.033244469158003 22.79960268969213 36 21.87493693932049 31.118455422545793 26.575395908959436 20.43121172917428 37 22.070453072764735 29.336612862360678 28.065085347724995 20.527848717149592 38 23.59242957943852 27.166877055778155 26.903199334527656 22.337494030255673 39 24.87292572404871 25.3684425301402 26.787055576357794 22.971576169453297 40 24.6940015560573 24.256332413301376 28.837284388530023 22.212381642111307 41 20.530539306141943 27.701183186509386 27.886161179733588 23.882116327615087 42 22.197134971154643 28.093560747894053 28.10521996686091 21.60408431409039 43 22.45677680891661 27.2836934611961 27.955219630537286 22.30431009935 44 22.128524951849666 25.87606698669728 28.057686227996026 23.937721833457026 45 22.52561104397095 24.412835006356516 27.320913275590303 25.740640674082226 46 23.24556781517447 26.77898380938074 26.87158491386752 23.10386346157727 47 21.01036100977805 25.974946132166217 30.079215424249828 22.935477433805907 48 21.398478471924825 25.205437680353544 29.226747145172972 24.169336702548662 49 22.059242285296605 24.307005172657338 30.52899221747134 23.10476032457472 50 20.707445532389084 23.926959477487618 30.388184726871586 24.977410263251713 51 20.242422068210917 23.200724665301937 28.792665454406848 27.764187812080298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 341.0 1 487.0 2 633.0 3 3469.0 4 6305.0 5 4195.5 6 2086.0 7 2155.0 8 2224.0 9 2052.0 10 1880.0 11 1889.0 12 1898.0 13 1858.0 14 1818.0 15 1726.5 16 1635.0 17 1634.5 18 1634.0 19 1643.0 20 1652.0 21 1726.5 22 1801.0 23 1956.0 24 2111.0 25 2449.5 26 3248.5 27 3709.0 28 4509.5 29 5310.0 30 5969.5 31 6629.0 32 7912.5 33 9196.0 34 10321.0 35 11446.0 36 12107.0 37 12768.0 38 14378.5 39 15989.0 40 18098.5 41 20208.0 42 22500.5 43 24793.0 44 27259.0 45 29725.0 46 38211.5 47 46698.0 48 45755.5 49 44813.0 50 43394.0 51 41975.0 52 36165.0 53 30355.0 54 26854.0 55 23353.0 56 21473.0 57 19593.0 58 18324.0 59 17055.0 60 16809.5 61 16564.0 62 14927.5 63 13291.0 64 11058.0 65 8825.0 66 7220.0 67 5615.0 68 4526.5 69 3438.0 70 2741.0 71 2044.0 72 1869.0 73 1694.0 74 1359.0 75 745.5 76 467.0 77 429.5 78 392.0 79 258.5 80 125.0 81 89.5 82 54.0 83 36.5 84 19.0 85 14.5 86 10.0 87 7.5 88 5.0 89 6.5 90 8.0 91 4.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 445999.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.14728630516882 #Duplication Level Percentage of deduplicated Percentage of total 1 74.00749900729676 30.45207750382737 2 9.36412894070832 7.706169890436847 3 3.688871179722944 4.553611157248374 4 2.2308421682657875 3.6717240559710382 5 1.6125330044475374 3.317567860526844 6 1.2996888916551272 3.208720255954863 7 1.1291537787943242 3.2523129673029323 8 0.9230408219237031 3.038449997684236 9 0.8290842688957292 3.070311100502772 >10 4.821471444529599 29.840930732154835 >50 0.060069575410936625 1.6215712684691144 >100 0.02590156003957786 1.933821811984963 >500 0.0038576791548307447 1.1485468430703374 >1k 0.0038576791548307447 3.1841845548654844 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3838 0.860540046053915 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 2689 0.6029161500362108 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC 1959 0.43923865300146414 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG 1885 0.4226466875486268 No Hit GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 1521 0.3410321547806161 No Hit CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 1121 0.2513458550355494 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 1029 0.23071800609418408 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTT 952 0.21345339339325872 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC 841 0.18856544521400273 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 805 0.18049367823694673 Illumina Single End Adapter 1 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTT 710 0.1591931820474934 No Hit GAACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCT 668 0.14977612057426137 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCT 571 0.1280271928860827 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCC 518 0.11614375816986137 No Hit CGTCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCT 490 0.10986571718770669 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.726472480880002E-4 0.0 0.0 0.18834122946464005 0.0 2 6.726472480880002E-4 0.0 0.0 0.9464146780598163 0.0 3 6.726472480880002E-4 0.0 0.0 1.443052562898123 0.0 4 6.726472480880002E-4 0.0 0.0 2.1201841259733767 0.0 5 8.968629974506669E-4 0.0 0.0 4.043506824006331 0.0 6 8.968629974506669E-4 0.0 0.0 5.281401976237615 0.0 7 8.968629974506669E-4 0.0 0.0 6.280283139648295 0.0 8 8.968629974506669E-4 0.0 0.0 7.655174114740167 0.0 9 8.968629974506669E-4 0.0 0.0 8.208314368417867 0.0 10 8.968629974506669E-4 0.0 0.0 9.683878214973577 0.0 11 8.968629974506669E-4 0.0 0.0 11.179397263222564 0.0 12 8.968629974506669E-4 0.0 0.0 12.799580268117193 0.0 13 0.0011210787468133336 0.0 0.0 13.393527788178897 0.0 14 0.0011210787468133336 0.0 0.0 13.67379747488223 0.0 15 0.0011210787468133336 0.0 0.0 14.109448675893892 0.0 16 0.0011210787468133336 0.0 0.0 14.844652118054077 0.0 17 0.0011210787468133336 0.0 0.0 15.728959033540434 0.0 18 0.0011210787468133336 0.0 0.0 16.692862540050537 0.0 19 0.0011210787468133336 0.0 0.0 17.334119583227764 0.0 20 0.0011210787468133336 0.0 0.0 17.92829131903883 0.0 21 0.0011210787468133336 0.0 0.0 18.60609552936217 0.0 22 0.0011210787468133336 0.0 0.0 19.36013309446882 0.0 23 0.0011210787468133336 0.0 0.0 20.10587467684905 0.0 24 0.0011210787468133336 0.0 0.0 20.66574140300763 0.0 25 0.0011210787468133336 0.0 0.0 21.179868116296223 0.0 26 0.0011210787468133336 0.0 0.0 21.679869237374973 0.0 27 0.0011210787468133336 0.0 0.0 22.176507122213277 0.0 28 0.0011210787468133336 0.0 0.0 22.66664275032007 0.0 29 0.0011210787468133336 0.0 0.0 23.16059004616602 0.0 30 0.0011210787468133336 0.0 0.0 23.761712470207332 0.0 31 0.0011210787468133336 0.0 0.0 24.29893340568028 0.0 32 0.0011210787468133336 0.0 0.0 24.825616200933187 0.0 33 0.0011210787468133336 0.0 0.0 25.338397619725605 0.0 34 0.0013452944961760004 0.0 0.0 25.859475021244442 0.0 35 0.0013452944961760004 0.0 0.0 26.40319821344891 0.0 36 0.0013452944961760004 0.0 0.0 26.92449983071711 0.0 37 0.0015695102455386672 0.0 0.0 27.42651889354012 0.0 38 0.0015695102455386672 0.0 0.0 27.961497671519442 0.0 39 0.0015695102455386672 0.0 0.0 28.494682723503864 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGG 30 2.162502E-6 45.000004 2 TTGTGCG 35 1.2097007E-7 45.0 1 GTCCTCG 20 7.028638E-4 45.0 9 TAGCCGT 20 7.028638E-4 45.0 44 ATACGCG 20 7.028638E-4 45.0 1 GTAAGCG 25 3.8869526E-5 45.0 1 TAAGCGG 55 1.8189894E-12 45.0 2 CGATAGA 25 3.8869526E-5 45.0 10 GGCTACG 25 3.8869526E-5 45.0 1 CGTTTTT 2165 0.0 43.33718 1 CACAACG 125 0.0 43.2 12 ATGACGG 60 3.6379788E-12 41.250004 2 CGACAGG 55 6.002665E-11 40.909092 2 ACAACGA 135 0.0 40.000004 13 CCGATGA 225 0.0 40.0 18 GCGATAT 45 1.9237632E-8 40.0 9 AACGAGC 130 0.0 39.80769 15 CGTATGG 40 3.451878E-7 39.375 2 CGAATAT 80 0.0 39.375 14 GCTACGA 80 0.0 39.375 10 >>END_MODULE