##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935515.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 346026 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.155291798882164 31.0 31.0 33.0 28.0 34.0 2 31.18567390889702 31.0 31.0 34.0 28.0 34.0 3 30.929022674596705 31.0 30.0 34.0 27.0 34.0 4 34.705672406119774 35.0 35.0 37.0 32.0 37.0 5 34.80345118574905 35.0 35.0 37.0 33.0 37.0 6 35.04429146942715 36.0 35.0 37.0 32.0 37.0 7 35.48400698213429 37.0 35.0 37.0 33.0 37.0 8 35.39734008427112 37.0 35.0 37.0 33.0 37.0 9 37.32633096934912 39.0 37.0 39.0 34.0 39.0 10 36.509724702768 38.0 35.0 39.0 32.0 39.0 11 36.75407628328507 39.0 37.0 39.0 32.0 39.0 12 36.95954350251137 39.0 37.0 39.0 33.0 39.0 13 37.0882188043673 39.0 37.0 39.0 33.0 39.0 14 38.164981822175214 40.0 38.0 41.0 33.0 41.0 15 38.359204221648085 40.0 38.0 41.0 34.0 41.0 16 38.28101356545462 40.0 38.0 41.0 34.0 41.0 17 38.19545930074619 40.0 37.0 41.0 34.0 41.0 18 38.144107668209905 39.0 37.0 41.0 34.0 41.0 19 37.98694317768029 39.0 37.0 41.0 34.0 41.0 20 38.03950570188368 39.0 37.0 41.0 34.0 41.0 21 38.000687809586566 40.0 37.0 41.0 34.0 41.0 22 38.126022322022045 40.0 37.0 41.0 34.0 41.0 23 38.1443706542283 40.0 37.0 41.0 34.0 41.0 24 38.13555050776531 40.0 37.0 41.0 34.0 41.0 25 37.73362117297544 39.0 36.0 41.0 33.0 41.0 26 37.85749336755042 40.0 36.0 41.0 33.0 41.0 27 37.91500927675955 40.0 36.0 41.0 34.0 41.0 28 37.846156069197114 40.0 36.0 41.0 33.0 41.0 29 37.84162750775953 40.0 36.0 41.0 33.0 41.0 30 37.54341870264084 40.0 36.0 41.0 33.0 41.0 31 37.46533786478473 40.0 36.0 41.0 33.0 41.0 32 37.369087872009615 40.0 36.0 41.0 33.0 41.0 33 37.24405969493622 40.0 36.0 41.0 32.0 41.0 34 37.07291070613191 40.0 36.0 41.0 31.0 41.0 35 37.04425389999595 40.0 36.0 41.0 31.0 41.0 36 36.869793021333656 40.0 36.0 41.0 31.0 41.0 37 36.840199869373976 40.0 36.0 41.0 31.0 41.0 38 36.71509944339443 40.0 36.0 41.0 31.0 41.0 39 36.67099582112327 40.0 36.0 41.0 30.0 41.0 40 36.615176316230574 39.0 35.0 41.0 30.0 41.0 41 36.48885343875894 39.0 35.0 41.0 30.0 41.0 42 36.518660447480826 39.0 35.0 41.0 30.0 41.0 43 36.47909116655974 39.0 35.0 41.0 30.0 41.0 44 36.46489859143533 39.0 35.0 41.0 30.0 41.0 45 36.4507117962234 39.0 35.0 41.0 30.0 41.0 46 36.346485524209164 39.0 35.0 41.0 30.0 41.0 47 36.330131261812696 39.0 35.0 41.0 30.0 41.0 48 36.23704288117078 39.0 35.0 41.0 29.0 41.0 49 36.22727193910284 39.0 35.0 41.0 29.0 41.0 50 36.11905463751279 39.0 35.0 41.0 29.0 41.0 51 34.93516961153208 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 12.0 10 12.0 11 13.0 12 7.0 13 4.0 14 13.0 15 13.0 16 25.0 17 52.0 18 90.0 19 199.0 20 350.0 21 567.0 22 874.0 23 1245.0 24 2053.0 25 3234.0 26 4184.0 27 4415.0 28 4345.0 29 4441.0 30 5134.0 31 6162.0 32 8048.0 33 11444.0 34 18908.0 35 22920.0 36 26500.0 37 42338.0 38 80763.0 39 97643.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.27855132273297 21.37151543525631 25.246657765601427 14.103275476409289 2 35.32624716061799 22.564200378006277 25.63506788507222 16.474484576303514 3 30.09716032899262 22.990468924300487 30.71503297440077 16.197337772306128 4 26.47055423580887 24.946969302884757 30.511869050302575 18.0706074110038 5 23.85745579811922 29.246646205776443 28.51230832365198 18.38358967245236 6 23.321079918850028 33.37205874703057 28.523579153011624 14.78328218110778 7 77.32887124088941 5.12360342864409 12.80135018755816 4.746175142908336 8 78.76460150393324 4.1011369087872005 11.947946108095923 5.186315479183645 9 73.23987214833568 6.728107136457955 13.83595452364851 6.19606619155786 10 33.95582990873518 31.512371902689395 21.25620618103842 13.275592007537007 11 24.329096657476608 24.597284597111198 32.369243929646906 18.70437481576529 12 22.41305566633721 22.765341332732223 35.414968817372106 19.40663418355846 13 21.581904249969654 24.590926693369862 36.57846520203684 17.24870385462364 14 18.53502337974603 28.38919618756972 34.24424754209222 18.831532890592037 15 17.309681931415557 27.83692554894719 37.4607688439597 17.39262367567755 16 19.71210255876726 26.647708553692496 34.51127949922838 19.12890938831186 17 19.95052394906741 26.537023229468303 32.18139677365285 21.331056047811437 18 20.618970828781652 25.85412656852375 34.209568067139465 19.31733453555513 19 20.44586244964251 28.637154433481875 31.407755486581934 19.509227630293676 20 21.830440487131025 27.39562923017346 32.12330865310699 18.650621629588528 21 20.588337292573392 27.853109303925137 33.153289059203644 18.405264344297827 22 19.49911278343246 25.31630571113153 32.06868848005641 23.1158930253796 23 18.8020553368822 27.514984423135836 32.306820874731955 21.376139365250012 24 19.39362938045118 26.36507083282759 32.957639021345216 21.283660765376013 25 18.824885991226093 28.542941859860242 30.891898296659786 21.74027385225388 26 19.189887465103777 28.37965933195771 31.999329530150916 20.431123672787592 27 21.348684780912418 26.728916324206853 32.104812933132195 19.817585961748538 28 18.661603463323566 27.171079629854404 33.09346696491015 21.073849941911877 29 21.339725916549625 25.344627282342948 32.31982567783923 20.995821123268193 30 22.629224393542682 25.549814175813378 31.932860536491475 19.888100894152462 31 22.383000121378164 27.747625900943863 29.295197470710292 20.574176506967685 32 23.09566333165716 28.198170079704994 29.624074491512197 19.08209209712565 33 23.238138174588034 27.26240224722998 29.83330732372712 19.666152254454868 34 22.552351557397422 27.675376994792302 29.561362440972644 20.210909006837635 35 21.68536468357869 27.160097796119366 30.572269135845282 20.582268384456658 36 24.872986422985555 26.732384271702124 29.82579343748736 18.568835867824962 37 22.143711744204193 28.672700895308445 30.98697785715524 18.19660950333212 38 21.922341095755808 27.74300197095016 30.180969060128433 20.1536878731656 39 23.893002259945785 26.997971250715263 29.263118956379003 19.84590753295995 40 22.989023946177454 25.84198875229029 31.60427251131418 19.564714790218076 41 21.171241467404183 26.54193615508661 30.521694901539192 21.765127475970015 42 23.62308034656355 25.472074352794298 30.652031928236607 20.25281337240554 43 23.339864634449434 25.44722072907816 30.797396727413545 20.415517909058856 44 22.78325906145781 26.32952437100102 29.035679399813887 21.85153716772728 45 22.089380566778217 25.447509724702766 29.259940004508334 23.20316970401068 46 23.49476628923838 26.09457092819615 29.55355955910828 20.857103223457194 47 20.983394311410127 26.03041389953356 32.029385075109964 20.956806713946353 48 21.368914474634852 24.53341656407322 31.537225526405532 22.560443434886395 49 23.112136082259717 23.69330628334287 32.07389040129932 21.120667233098093 50 21.030500598220943 23.806881563813125 31.462953650881726 23.699664187084206 51 20.496147688323997 24.282279366290393 29.285949610722895 25.93562333466271 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 115.0 1 185.0 2 255.0 3 2290.0 4 4325.0 5 3040.5 6 1756.0 7 1861.5 8 1967.0 9 1851.0 10 1735.0 11 1725.5 12 1716.0 13 1682.0 14 1648.0 15 1603.0 16 1558.0 17 1516.5 18 1475.0 19 1417.5 20 1360.0 21 1430.5 22 1501.0 23 1660.5 24 1820.0 25 2292.0 26 3056.5 27 3349.0 28 4101.0 29 4853.0 30 5830.0 31 6807.0 32 7499.0 33 8191.0 34 9396.0 35 10601.0 36 11573.0 37 12545.0 38 13948.5 39 15352.0 40 16483.0 41 17614.0 42 19885.0 43 22156.0 44 24411.5 45 26667.0 46 31751.5 47 36836.0 48 38686.0 49 40536.0 50 38811.0 51 37086.0 52 30823.5 53 24561.0 54 20752.0 55 16943.0 56 14242.5 57 11542.0 58 10080.5 59 8619.0 60 7958.5 61 7298.0 62 6081.0 63 4864.0 64 3772.0 65 2680.0 66 2003.0 67 1326.0 68 1024.5 69 723.0 70 584.0 71 445.0 72 306.5 73 168.0 74 148.0 75 112.5 76 97.0 77 61.0 78 25.0 79 14.5 80 4.0 81 4.0 82 4.0 83 6.0 84 8.0 85 4.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 346026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.63893541485187 #Duplication Level Percentage of deduplicated Percentage of total 1 75.63357143642806 34.51835681981726 2 9.799109256994445 8.944418290060934 3 3.6583310526401016 5.00887003912766 4 2.1183182522228483 3.867111596052019 5 1.4219967669320999 3.2449209303071136 6 1.1606998583014287 3.1783863521427973 7 0.9215670163016806 2.9441536276215095 8 0.7316016787122742 2.6711617411317357 9 0.6670190946722964 2.739783724399971 >10 3.8257951121192617 27.114811184024624 >50 0.03642739233509964 1.16696353190499 >100 0.0191723117553156 1.633632277480592 >500 0.004473539409573639 1.5309651534539597 >1k 0.00191723117553156 1.4364647324749003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2543 0.7349158733736771 No Hit GCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 1308 0.3780062769849664 RNA PCR Primer, Index 47 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 1074 0.31038130082710547 RNA PCR Primer, Index 17 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGCT 974 0.2814817383664811 RNA PCR Primer, Index 17 (96% over 25bp) CGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTG 968 0.27974776461884365 RNA PCR Primer, Index 17 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTC 959 0.2771468039973875 RNA PCR Primer, Index 17 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTT 644 0.1861131822464208 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTC 599 0.17310837913913985 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGC 589 0.1702184228930774 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCG 516 0.14912174229682162 No Hit CGTCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCT 492 0.1421858473062718 RNA PCR Primer, Index 17 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCTTCTGC 468 0.13524995231572196 RNA PCR Primer, Index 47 (95% over 23bp) CGTTTTCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCCGTCT 424 0.12253414483304724 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGAGATGTCGTATGCC 404 0.11675423234092236 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.29188558085230587 0.0 2 0.0 0.0 0.0 1.2395022339361783 0.0 3 0.0 0.0 0.0 1.8556409055966894 0.0 4 0.0 0.0 0.0 2.617722367683353 0.0 5 0.0 0.0 0.0 4.481744146393623 0.0 6 0.0 0.0 0.0 5.769797645263651 0.0 7 0.0 0.0 0.0 6.902949489344731 0.0 8 0.0 0.0 0.0 8.709172143133753 0.0 9 0.0 0.0 0.0 9.440331073387549 0.0 10 0.0 0.0 0.0 10.94657626883529 0.0 11 0.0 0.0 0.0 12.779964511337297 0.0 12 0.0 0.0 0.0 14.352100709195263 0.0 13 0.0 0.0 0.0 15.028928462023085 0.0 14 0.0 0.0 0.0 15.319947056001572 0.0 15 0.0 0.0 0.0 15.74939455416645 0.0 16 0.0 0.0 0.0 16.599041690508805 0.0 17 0.0 0.0 0.0 17.75184523706311 0.0 18 0.0 0.0 0.0 18.92747943796131 0.0 19 0.0 0.0 0.0 19.634940726997392 0.0 20 0.0 0.0 0.0 20.324773282932497 0.0 21 0.0 0.0 0.0 21.162571598665995 0.0 22 0.0 0.0 0.0 22.10325235675932 0.0 23 0.0 0.0 0.0 23.04248813672961 0.0 24 0.0 0.0 0.0 23.738100605156838 0.0 25 0.0 0.0 0.0 24.324183731858298 0.0 26 0.0 0.0 0.0 24.87414240548398 0.0 27 0.0 0.0 0.0 25.47034037904666 0.0 28 0.0 0.0 0.0 26.075497216972135 0.0 29 0.0 0.0 0.0 26.714177547351934 0.0 30 0.0 0.0 0.0 27.470190101321865 0.0 31 0.0 0.0 0.0 28.131990081670164 0.0 32 2.8899562460624347E-4 0.0 0.0 28.755931635195044 0.0 33 2.8899562460624347E-4 0.0 0.0 29.33854681440123 0.0 34 2.8899562460624347E-4 0.0 0.0 29.933010814216274 0.0 35 2.8899562460624347E-4 0.0 0.0 30.52400686653604 0.0 36 2.8899562460624347E-4 0.0 0.0 31.145347459439463 0.0 37 5.779912492124869E-4 0.0 0.0 31.772467964835013 0.0 38 8.669868738187304E-4 0.0 0.0 32.365486986527024 0.0 39 8.669868738187304E-4 0.0 0.0 32.97497875882159 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTGACG 45 3.8380676E-10 45.000004 1 GCTAGCG 20 7.0264435E-4 45.000004 1 GTAAGCG 20 7.0264435E-4 45.000004 1 TACAGCG 40 6.7921064E-9 45.000004 1 ACGCCAC 25 3.885136E-5 45.0 28 GCGCGAC 25 3.885136E-5 45.0 9 ACACCGG 25 3.885136E-5 45.0 18 CGACCCG 25 3.885136E-5 45.0 32 CGTTATT 25 3.885136E-5 45.0 1 CACACCG 25 3.885136E-5 45.0 17 ACCCGCT 25 3.885136E-5 45.0 34 CACCGGC 25 3.885136E-5 45.0 19 AGGGCGC 25 3.885136E-5 45.0 6 CGCCACA 25 3.885136E-5 45.0 29 ACACGAC 30 2.1610886E-6 44.999996 26 GACACGA 30 2.1610886E-6 44.999996 25 CACGACC 30 2.1610886E-6 44.999996 27 GTATGCG 30 2.1610886E-6 44.999996 1 TACGAGG 30 2.1610886E-6 44.999996 2 TTTGACG 30 2.1610886E-6 44.999996 1 >>END_MODULE