##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935514.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 415756 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.075332647033356 31.0 30.0 33.0 28.0 34.0 2 31.066000250146722 31.0 31.0 34.0 28.0 34.0 3 30.90484563061026 31.0 30.0 34.0 27.0 34.0 4 34.74887915027083 35.0 35.0 37.0 32.0 37.0 5 34.77504594040735 35.0 35.0 37.0 32.0 37.0 6 34.95557971502516 36.0 35.0 37.0 32.0 37.0 7 35.370573124621174 37.0 35.0 37.0 33.0 37.0 8 35.101773636459846 37.0 35.0 37.0 32.0 37.0 9 36.96013286639279 39.0 37.0 39.0 32.0 39.0 10 36.26375085386621 37.0 35.0 39.0 32.0 39.0 11 36.5731053791166 38.0 35.0 39.0 32.0 39.0 12 36.763676290901394 39.0 35.0 39.0 33.0 39.0 13 36.84223198222034 39.0 37.0 39.0 33.0 39.0 14 37.891005782237656 40.0 37.0 41.0 33.0 41.0 15 38.037786586363154 40.0 37.0 41.0 33.0 41.0 16 38.01290901394087 40.0 37.0 41.0 33.0 41.0 17 37.89116452919501 39.0 37.0 41.0 33.0 41.0 18 37.86558221649236 39.0 37.0 41.0 33.0 41.0 19 37.71468120724656 39.0 37.0 41.0 33.0 41.0 20 37.72027102435082 39.0 36.0 41.0 33.0 41.0 21 37.74186301580735 39.0 36.0 41.0 33.0 41.0 22 37.853683410461905 39.0 36.0 41.0 33.0 41.0 23 37.85445790319322 40.0 36.0 41.0 33.0 41.0 24 37.803117694032075 40.0 36.0 41.0 33.0 41.0 25 37.4578214144835 39.0 36.0 41.0 33.0 41.0 26 37.5162090264482 39.0 36.0 41.0 33.0 41.0 27 37.58552372064384 39.0 36.0 41.0 33.0 41.0 28 37.4936741742753 40.0 36.0 41.0 33.0 41.0 29 37.48149395318408 40.0 36.0 41.0 33.0 41.0 30 37.22151694744033 39.0 36.0 41.0 32.0 41.0 31 37.20199347694321 39.0 36.0 41.0 32.0 41.0 32 37.10844100866855 39.0 35.0 41.0 32.0 41.0 33 37.06506701045806 39.0 36.0 41.0 31.0 41.0 34 36.921033009746104 39.0 35.0 41.0 31.0 41.0 35 36.91958985558838 40.0 36.0 41.0 31.0 41.0 36 36.778947267147075 39.0 35.0 41.0 31.0 41.0 37 36.77933451351274 39.0 35.0 41.0 31.0 41.0 38 36.675102704470895 39.0 35.0 41.0 30.0 41.0 39 36.51527097624568 39.0 35.0 41.0 30.0 41.0 40 36.456616380761794 39.0 35.0 41.0 30.0 41.0 41 36.23642713514658 39.0 35.0 41.0 30.0 41.0 42 36.28805356988234 39.0 35.0 41.0 30.0 41.0 43 36.28429655855839 39.0 35.0 41.0 30.0 41.0 44 36.30470997411943 39.0 35.0 41.0 30.0 41.0 45 36.295714313202936 39.0 35.0 41.0 30.0 41.0 46 36.134785787817854 39.0 35.0 40.0 30.0 41.0 47 36.06441999634401 39.0 35.0 40.0 29.0 41.0 48 36.039371650679726 39.0 35.0 40.0 29.0 41.0 49 36.05126083568247 39.0 35.0 40.0 29.0 41.0 50 35.95980575145037 39.0 35.0 40.0 29.0 41.0 51 34.836137061160876 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 19.0 10 34.0 11 18.0 12 19.0 13 14.0 14 15.0 15 24.0 16 40.0 17 67.0 18 125.0 19 262.0 20 467.0 21 897.0 22 1227.0 23 1922.0 24 2660.0 25 3644.0 26 4429.0 27 4795.0 28 4994.0 29 5684.0 30 6883.0 31 8678.0 32 11368.0 33 15805.0 34 25804.0 35 31081.0 36 35526.0 37 53357.0 38 93728.0 39 102151.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.121205707193646 20.72609896189111 22.343393721317312 13.809301609597938 2 33.180038291690316 26.571113826378934 23.308623327143803 16.940224554786944 3 29.122369851547543 25.501255544117225 28.982143372555058 16.39423123178018 4 26.232213125006016 24.53554488690482 30.400282858214915 18.831959129874253 5 24.946362770471143 28.562185512656463 26.996603777215483 19.494847939656914 6 22.711879082923637 35.59419467187485 26.925408172100944 14.76851807310057 7 74.49609867326028 5.204494944149935 15.155042861678483 5.144363520911304 8 75.00288630831545 7.851720720807396 11.376384225362953 5.769008745514196 9 69.5614735566053 6.587517678638433 14.131606038156995 9.719402726599254 10 36.570247933884296 25.755010150184244 21.51550428616785 16.159237629763613 11 26.616813708040294 23.435861418716748 29.2876110026073 20.659713870635663 12 23.154205832267003 21.38369620642877 33.98002674645706 21.48207121484717 13 22.369851547542307 23.15588951211768 35.86526712783459 18.608991812505412 14 19.30627579638057 28.435668998162384 31.69118425230183 20.566870953155217 15 17.516043063720065 25.114730755539306 36.95725377384812 20.411972406892502 16 20.063931729187313 25.228018356920884 31.82034654941841 22.887703364473396 17 20.15196413280867 25.458201445078366 30.67736845649852 23.712465965614445 18 20.321775272034557 25.387967942735646 32.17704615206996 22.113210633159834 19 20.794167732997238 26.770509625838233 29.504084126266367 22.931238514898162 20 22.124034289342788 26.803221120080046 30.835393836769644 20.23735075380752 21 21.28724540355401 27.74415763091814 31.376576645917314 19.59202031961054 22 20.019915527376632 24.177161604402585 30.330049355872195 25.47287351234859 23 19.18240506450899 26.819576867200958 30.739424085280792 23.258593983009266 24 21.061151252176757 25.23932306448975 30.602324440296712 23.09720124303678 25 19.61102184935395 28.038080027708563 28.899883585564613 23.451014537372885 26 18.49834999374633 26.468649881180305 30.369255043823777 24.66374508124958 27 21.354352071888318 25.35790223111633 28.835903751238707 24.451841945756644 28 17.983143959437747 25.80431791723992 30.965518236658042 25.247019886664297 29 19.285350061093524 22.716930122475684 30.81759493549101 27.180124880939783 30 19.60741396395963 25.423565745292915 28.461886298694427 26.507133992053035 31 19.460933816950327 25.629696264154937 26.99443904597889 27.914930872915843 32 20.36506989676637 26.684401427760513 27.650593136358825 25.299935539114287 33 19.451793840618052 25.09957763688317 26.809715313789816 28.638913208708956 34 18.17869134780977 26.658905704307333 27.67753201396973 27.484870933913157 35 17.830650670104582 26.863352543318676 27.695811966634277 27.610184819942468 36 18.7545098567429 28.647812659348272 25.377865863631555 27.21981162027728 37 17.74766930603527 27.562560732737474 29.49951413810023 25.19025582312703 38 18.236898565504767 27.692925658318824 26.870568314107313 27.199607462069096 39 19.400802393711697 26.829919471997997 29.053338977669597 24.71593915662071 40 19.58239929189236 26.057831997613984 29.164461847814582 25.19530686267907 41 17.398907051251214 29.31743618853366 27.24410471526568 26.039552044949442 42 19.115057870481724 27.832430560232446 28.424364290593523 24.62814727869231 43 19.89243691011074 25.480570334523133 28.74185820529349 25.885134550072642 44 19.437602824733737 23.785345250579667 29.372997623606157 27.404054301080443 45 19.551371477501224 23.252821366378356 28.178306506701045 29.017500649419368 46 22.187773597975735 25.179672692637027 27.424739510674527 25.207814198712708 47 17.70172889868096 25.444250954887 31.22624808782074 25.627772058611303 48 18.494261056966106 25.61935365935789 28.758695003800305 27.127690279875694 49 19.18240506450899 23.285773386313128 32.11883893437497 25.412982614802914 50 18.882710051087656 22.86894236042294 30.912843109901 27.3355044785884 51 18.438699621893612 22.64453188889637 28.314444048913305 30.602324440296712 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 428.0 1 478.0 2 528.0 3 2617.0 4 4706.0 5 3191.0 6 1676.0 7 1861.0 8 2046.0 9 1823.0 10 1600.0 11 1622.5 12 1645.0 13 1529.5 14 1414.0 15 1422.0 16 1430.0 17 1373.5 18 1317.0 19 1387.0 20 1457.0 21 1372.0 22 1287.0 23 1386.5 24 1486.0 25 1825.0 26 2619.5 27 3075.0 28 3520.5 29 3966.0 30 4861.5 31 5757.0 32 6316.5 33 6876.0 34 8416.5 35 9957.0 36 11126.5 37 12296.0 38 13737.5 39 15179.0 40 16173.0 41 17167.0 42 19752.5 43 22338.0 44 24831.5 45 27325.0 46 38476.5 47 49628.0 48 48036.5 49 46445.0 50 45302.0 51 44159.0 52 37857.5 53 31556.0 54 26965.0 55 22374.0 56 20647.5 57 18921.0 58 16919.5 59 14918.0 60 13405.5 61 11893.0 62 10809.0 63 9725.0 64 8011.5 65 6298.0 66 5339.5 67 4381.0 68 3579.5 69 2778.0 70 2500.5 71 2223.0 72 1849.5 73 1476.0 74 1176.0 75 698.5 76 521.0 77 380.0 78 239.0 79 181.5 80 124.0 81 100.5 82 77.0 83 44.0 84 11.0 85 9.5 86 8.0 87 5.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 415756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.41165809418751 #Duplication Level Percentage of deduplicated Percentage of total 1 74.61175596386828 30.89796527782669 2 9.963919986348174 8.25244895504984 3 3.708552433119809 4.607319161541742 4 2.106030393286011 3.488568423309102 5 1.467112655097788 3.037778382928262 6 1.1476268921427275 2.851507948626579 7 0.8791062951150532 2.5483674525226743 8 0.7774481706187031 2.5756334262090634 9 0.6376003672240064 2.3763679567388056 >10 4.611732888340313 30.26221540519103 >50 0.05393739371844666 1.55140650399475 >100 0.026382420840544565 2.0899072279165583 >500 0.005276484168108913 1.576899099130814 >1k 0.0035176561120726087 3.8836147790140876 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTC 3863 0.9291507518833162 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGC 3083 0.7415407113787895 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCG 2931 0.7049808060497023 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2779 0.668420900720615 No Hit GCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC 2142 0.5152060343085849 No Hit CCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC 1198 0.28814978015951664 No Hit CGCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTG 949 0.2282588826138408 No Hit GAACTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCT 897 0.2157515465802057 No Hit CTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGCT 859 0.2066115702479339 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTT 795 0.1912179258988445 No Hit CGTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTC 742 0.1784700641722549 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCT 665 0.15994958581475674 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCT 539 0.12964334850248704 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCCTCAAAT 531 0.12771914295885087 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTC 518 0.1245923089504421 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCC 484 0.11641443538998836 No Hit CGTCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCT 468 0.11256602430271602 No Hit TCTGTCTCTTATACACATCTGACGCCCCTCAAATCGTATGCCGTCTTCTGC 452 0.10871761321544367 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCCTCAAATCGTA 426 0.1024639451986261 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2147894438083876 0.0 2 0.0 0.0 0.0 1.2601141053887377 0.0 3 0.0 0.0 0.0 1.7803711792493675 0.0 4 0.0 0.0 0.0 2.603690626232694 0.0 5 0.0 0.0 0.0 5.048874820808359 0.0 6 0.0 0.0 0.0 6.32462309623914 0.0 7 0.0 0.0 0.0 7.520757367301975 0.0 8 0.0 0.0 0.0 9.215982451245441 0.0 9 0.0 0.0 0.0 9.793965691415156 0.0 10 0.0 0.0 0.0 11.670306622153378 0.0 11 0.0 0.0 0.0 13.399445828803433 0.0 12 2.405256929545214E-4 0.0 0.0 15.479752547167088 0.0 13 2.405256929545214E-4 0.0 0.0 16.092371487122254 0.0 14 2.405256929545214E-4 0.0 0.0 16.36440604585382 0.0 15 2.405256929545214E-4 0.0 0.0 16.84593848314877 0.0 16 2.405256929545214E-4 0.0 0.0 17.70774204100482 0.0 17 2.405256929545214E-4 0.0 0.0 18.78866450514244 0.0 18 2.405256929545214E-4 0.0 0.0 19.920578416186416 0.0 19 2.405256929545214E-4 0.0 0.0 20.719364242488382 0.0 20 2.405256929545214E-4 0.0 0.0 21.380809898113316 0.0 21 2.405256929545214E-4 0.0 0.0 22.139908985077785 0.0 22 2.405256929545214E-4 0.0 0.0 23.044285590586785 0.0 23 4.810513859090428E-4 0.0 0.0 23.91306439353852 0.0 24 4.810513859090428E-4 0.0 0.0 24.606499966326403 0.0 25 4.810513859090428E-4 0.0 0.0 25.212384186878843 0.0 26 4.810513859090428E-4 0.0 0.0 25.791329529820377 0.0 27 4.810513859090428E-4 0.0 0.0 26.354881228412818 0.0 28 4.810513859090428E-4 0.0 0.0 26.930699737345943 0.0 29 4.810513859090428E-4 0.0 0.0 27.52143083924225 0.0 30 4.810513859090428E-4 0.0 0.0 28.195624356593772 0.0 31 4.810513859090428E-4 0.0 0.0 28.793090177892804 0.0 32 4.810513859090428E-4 0.0 0.0 29.396328615822743 0.0 33 4.810513859090428E-4 0.0 0.0 29.99042707742041 0.0 34 4.810513859090428E-4 0.0 0.0 30.578031345308307 0.0 35 4.810513859090428E-4 0.0 0.0 31.14158304390075 0.0 36 4.810513859090428E-4 0.0 0.0 31.693830034924332 0.0 37 4.810513859090428E-4 0.0 0.0 32.25016596272814 0.0 38 4.810513859090428E-4 0.0 0.0 32.82285763765285 0.0 39 4.810513859090428E-4 0.0 0.0 33.38664986193825 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAC 25 3.886495E-5 45.000004 34 GCGCCAG 25 3.886495E-5 45.000004 1 TAGCACG 25 3.886495E-5 45.000004 1 GCCGATT 25 3.886495E-5 45.000004 9 CACGTGA 25 3.886495E-5 45.000004 43 AACACGT 25 3.886495E-5 45.000004 41 TCGTTGA 20 7.028087E-4 45.0 24 CGTTAGG 45 3.8380676E-10 45.0 2 CGAATAT 45 3.8380676E-10 45.0 14 CAATCGA 20 7.028087E-4 45.0 41 AAGGGCG 150 0.0 43.5 5 CGTTTTT 1590 0.0 43.301888 1 TAACGGG 55 6.002665E-11 40.909092 3 TACGAAT 50 1.0786607E-9 40.500004 12 GCGATGC 50 1.0786607E-9 40.500004 9 GCTACGA 50 1.0786607E-9 40.500004 10 CTAAGCG 45 1.9232175E-8 40.0 1 ACTACGG 45 1.9232175E-8 40.0 2 AAGACGC 40 3.4511322E-7 39.375 39 TGCGAAG 40 3.4511322E-7 39.375 1 >>END_MODULE