##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935511.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 285873 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0651443123345 31.0 30.0 33.0 28.0 34.0 2 31.01304425391695 31.0 30.0 34.0 28.0 34.0 3 30.898804713981384 31.0 30.0 34.0 28.0 34.0 4 34.81074463135728 35.0 35.0 37.0 32.0 37.0 5 34.73320670367611 35.0 35.0 37.0 32.0 37.0 6 34.871537360995966 35.0 35.0 37.0 32.0 37.0 7 35.264572030237204 36.0 35.0 37.0 33.0 37.0 8 34.76195023664354 37.0 35.0 37.0 32.0 37.0 9 36.43782029082845 39.0 35.0 39.0 32.0 39.0 10 36.095738317364706 37.0 35.0 39.0 32.0 39.0 11 36.39618292038772 38.0 35.0 39.0 32.0 39.0 12 36.5191361198854 38.0 35.0 39.0 32.0 39.0 13 36.37584171992458 39.0 35.0 39.0 32.0 39.0 14 37.48748570169271 39.0 36.0 41.0 32.0 41.0 15 37.503615241733215 39.0 36.0 41.0 32.0 41.0 16 37.78725867780448 39.0 36.0 41.0 33.0 41.0 17 37.367880142580795 39.0 36.0 41.0 32.0 41.0 18 37.48145505171877 39.0 36.0 40.0 32.0 41.0 19 37.39091834485943 39.0 36.0 40.0 32.0 41.0 20 36.92649882989999 39.0 35.0 40.0 30.0 41.0 21 37.37947969902719 39.0 35.0 40.0 32.0 41.0 22 37.40351134944538 39.0 35.0 41.0 32.0 41.0 23 37.20975747972002 39.0 35.0 41.0 31.0 41.0 24 37.27504521238452 39.0 35.0 41.0 31.0 41.0 25 37.25691828189441 39.0 35.0 41.0 32.0 41.0 26 37.00679322636275 39.0 35.0 41.0 31.0 41.0 27 36.91142570302197 39.0 35.0 41.0 31.0 41.0 28 36.81166462030342 39.0 35.0 41.0 30.0 41.0 29 36.792523253332774 39.0 35.0 41.0 30.0 41.0 30 36.59674400870316 39.0 35.0 41.0 30.0 41.0 31 36.75598604974937 39.0 35.0 41.0 30.0 41.0 32 36.44511723737464 39.0 35.0 41.0 30.0 41.0 33 36.27931633977325 39.0 35.0 41.0 29.0 41.0 34 36.11055608609418 39.0 35.0 41.0 29.0 41.0 35 36.110678518083205 39.0 35.0 41.0 29.0 41.0 36 36.100702060005666 39.0 35.0 41.0 28.0 41.0 37 35.83497217295792 39.0 35.0 41.0 27.0 41.0 38 35.89383397522676 39.0 35.0 41.0 26.0 41.0 39 35.594641676548676 39.0 35.0 41.0 26.0 41.0 40 35.44681729299374 39.0 35.0 40.0 25.0 41.0 41 35.56212374026229 39.0 35.0 40.0 25.0 41.0 42 35.45684971998055 39.0 35.0 40.0 25.0 41.0 43 35.415667096927656 39.0 35.0 40.0 25.0 41.0 44 35.58755461341225 39.0 35.0 40.0 26.0 41.0 45 35.62468298859983 39.0 35.0 40.0 26.0 41.0 46 35.47346548992035 39.0 35.0 40.0 26.0 41.0 47 35.08619212027718 38.0 34.0 40.0 24.0 41.0 48 35.22228052316938 38.0 35.0 40.0 25.0 41.0 49 35.27639196426385 38.0 35.0 40.0 25.0 41.0 50 35.092639039013825 38.0 35.0 40.0 24.0 41.0 51 33.842024255526056 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 13.0 10 4.0 11 8.0 12 9.0 13 6.0 14 5.0 15 10.0 16 21.0 17 55.0 18 118.0 19 274.0 20 745.0 21 1754.0 22 2831.0 23 3507.0 24 3523.0 25 3461.0 26 3479.0 27 3249.0 28 3321.0 29 3862.0 30 5002.0 31 6370.0 32 8800.0 33 11867.0 34 19458.0 35 21976.0 36 23297.0 37 33354.0 38 57952.0 39 67522.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.5942394000133 16.83579771436967 21.184232159035655 10.385730726581384 2 25.9597793425752 37.99729250401402 21.21501505913465 14.827913094276129 3 25.383299577084927 36.47004089228433 24.66479870431975 13.481860826310985 4 23.269074029376682 21.15239984188783 40.16923598940789 15.409290139327602 5 34.36141223550318 24.303449433839504 22.92731387714125 18.40782445351607 6 20.42935149524439 43.186659810475284 23.14454320624893 13.239445488031398 7 67.55167504451278 4.257135161417833 23.87878533474655 4.312404459322846 8 66.19932627425466 17.29614199312282 10.82193841321146 5.682593319411067 9 61.88167472968766 5.903320705348179 11.560728015587342 20.65427654937682 10 40.28816992160855 27.664032629874104 18.117835542356218 13.929961906161129 11 31.730523694087935 20.541289313786194 28.791106540316854 18.93708045180902 12 23.36527059218604 18.764976055801004 31.54512668212808 26.324626669884875 13 25.997208550650114 20.886197717168113 38.00114036652639 15.115453365655378 14 19.513210411616345 33.28890801159955 27.09035130984738 20.107530266936717 15 15.04724125748147 22.98468200914392 39.49970791225474 22.46836882111987 16 18.355703406757545 24.6546543395144 27.326470145833987 29.663172107894063 17 18.103843315038496 28.426259213007178 31.532883483225067 21.937013988729262 18 18.235720057508054 24.62317182804952 30.474721292322116 26.666386822120312 19 18.62120592011138 25.92864663679326 27.519912688501535 27.930234754593826 20 24.439523844504375 26.07836346909292 33.08007401888251 16.40203866752019 21 20.319162705117307 33.23538774210925 28.86491553941785 17.58053401335558 22 18.169606783431806 22.094426546053665 34.32748108425769 25.408485586256834 23 22.044054527709857 28.110734486992477 29.773710703704094 20.071500281593575 24 22.131855754128583 27.206486796584496 26.297341826615316 24.364315622671604 25 17.314331888635863 36.269602235957926 25.36965715545015 21.046408719956062 26 17.095003725430523 25.41338286581804 32.6760484550832 24.815564953668236 27 26.735298541660107 25.90485985035313 25.652649952951133 21.707191655035626 28 15.873832086276074 29.55158409503521 31.860301602459835 22.714282216228884 29 22.10841877337139 24.61442668597594 30.743372056822437 22.533782483830233 30 22.206014558912525 30.032916714764944 28.90164513612688 18.859423590195647 31 22.692594263886413 22.29031772850182 23.112011277735217 31.90507672987655 32 30.51809719700706 26.38549285871698 24.85404357879198 18.24236636548397 33 24.094265635439513 22.34908508323626 27.168008171460755 26.38864110986347 34 21.13281072364302 25.201400621954505 25.925498385646772 27.740290268755707 35 25.23078429932173 22.426392139166694 29.259146544094754 23.083677017416825 36 18.947224816614373 33.69118454698415 24.784782053569245 22.576808582832236 37 25.393443941890283 23.163082907444917 29.833877281170313 21.6095958694945 38 19.18544248669864 24.610928629146507 26.432366820231362 29.771262063923494 39 25.28150612334848 24.631567164440156 25.849240746765172 24.237685965446197 40 19.221122666358838 21.783799099600174 34.72590975712991 24.269168476911076 41 17.82749682551343 27.460445722401204 24.512283426556547 30.199774025528818 42 19.789556901141417 23.232344432667652 33.495293364535996 23.48280530165493 43 22.558618687319193 27.960667849009873 24.984171292846824 24.496542170824107 44 22.443532617630908 22.263032885232253 29.495265380081364 25.798169117055476 45 19.66362685528189 20.49966243751596 28.385331948102827 31.45137875909932 46 28.345803905930257 25.98741399152771 25.09645891707157 20.57032318547047 47 17.457752218642543 24.21599801310372 36.8940053800114 21.43224438824233 48 20.857513651166776 25.425975870403988 26.580684429799245 27.135826048629987 49 20.474126622661114 19.793754569336734 36.6960153634656 23.03610344453656 50 22.13745264505567 22.011522599196145 30.525443116348868 25.325581639399314 51 19.803898934142083 21.301766868504547 27.896653409031284 30.997680788322086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 266.0 1 298.0 2 330.0 3 1319.0 4 2308.0 5 1583.0 6 858.0 7 918.0 8 978.0 9 836.0 10 694.0 11 737.0 12 780.0 13 755.5 14 731.0 15 708.0 16 685.0 17 659.5 18 634.0 19 627.5 20 621.0 21 735.0 22 849.0 23 973.0 24 1097.0 25 1355.0 26 1923.0 27 2233.0 28 2732.5 29 3232.0 30 3703.5 31 4175.0 32 4555.0 33 4935.0 34 5705.5 35 6476.0 36 6903.5 37 7331.0 38 8395.0 39 9459.0 40 10598.0 41 11737.0 42 12930.5 43 14124.0 44 15996.0 45 17868.0 46 36015.5 47 54163.0 48 41302.0 49 28441.0 50 27872.0 51 27303.0 52 23116.5 53 18930.0 54 17345.0 55 15760.0 56 14142.5 57 12525.0 58 11152.0 59 9779.0 60 8914.0 61 8049.0 62 7067.0 63 6085.0 64 4990.5 65 3896.0 66 3162.0 67 2428.0 68 2081.5 69 1735.0 70 1349.5 71 964.0 72 885.0 73 806.0 74 637.0 75 366.5 76 265.0 77 199.5 78 134.0 79 105.5 80 77.0 81 52.0 82 27.0 83 20.0 84 13.0 85 11.0 86 9.0 87 5.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 285873.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.06595570207903 #Duplication Level Percentage of deduplicated Percentage of total 1 71.91677788302154 25.93747325365311 2 9.841501505921995 7.098863147090534 3 4.074735112133779 4.408776481557687 4 2.548829072984873 3.677038257537743 5 1.8862518163853579 3.4014737226360205 6 1.4896087568827245 3.2234498063496804 7 1.2618206407957229 3.1856137134435256 8 1.077992385375805 3.110306049451383 9 0.965097903430376 3.1326460409960353 >10 4.848468035542986 25.518778211624525 >50 0.05095237375019585 1.2654535183767188 >100 0.024976653799115612 1.7929660328708863 >500 0.0029971984558938734 0.6871354953144655 >1k 0.0069934630637523715 4.320990487577908 >5k 0.0029971984558938734 9.239035781519775 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTC 9140 3.1972239421001634 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGC 8556 2.9929374232613783 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCG 7945 2.779206150983129 No Hit GCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 2990 1.045918991999944 TruSeq Adapter, Index 16 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCT 1745 0.6104109167357533 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCT 1727 0.604114414442777 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCGTCTAT 1678 0.586973935978564 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTC 1355 0.4739867003879345 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCGTCTATCGTA 1300 0.4547473878260626 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1197 0.4187174024829207 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTT 804 0.2812437690862726 No Hit CCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGC 553 0.19344254266754818 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTGCT 550 0.1923931256187188 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATG 384 0.13432538225016005 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCGCCCATCGAATGC 366 0.1280288799571838 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCGTCTATCGT 357 0.12488062881069566 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGCGTCTA 347 0.12138257198126441 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTAT 334 0.11683509810300378 No Hit CGCTGTCTCTTATACACATCTGACGCAGCGTCTATCGTATGCCGTCTTCTG 294 0.10284287078527878 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.498056829431251E-4 0.0 0.0 0.20043865632641067 0.0 2 3.498056829431251E-4 0.0 0.0 1.6570295201015837 0.0 3 3.498056829431251E-4 0.0 0.0 1.9945920041416993 0.0 4 3.498056829431251E-4 0.0 0.0 2.991888006212549 0.0 5 3.498056829431251E-4 0.0 0.0 7.199000954969515 0.0 6 3.498056829431251E-4 0.0 0.0 8.08400933281562 0.0 7 3.498056829431251E-4 0.0 0.0 9.300283692408867 0.0 8 3.498056829431251E-4 0.0 0.0 10.737985049305111 0.0 9 3.498056829431251E-4 0.0 0.0 11.06820161400342 0.0 10 3.498056829431251E-4 0.0 0.0 14.706880327977808 0.0 11 3.498056829431251E-4 0.0 0.0 15.927702161449314 0.0 12 3.498056829431251E-4 0.0 0.0 20.008885064346757 0.0 13 3.498056829431251E-4 0.0 0.0 20.58501502415408 0.0 14 3.498056829431251E-4 0.0 0.0 20.876053352362764 0.0 15 3.498056829431251E-4 0.0 0.0 21.643527020739977 0.0 16 3.498056829431251E-4 0.0 0.0 22.357130613943955 0.0 17 3.498056829431251E-4 0.0 0.0 23.206808617812804 0.0 18 3.498056829431251E-4 0.0 0.0 24.034099057973297 0.0 19 3.498056829431251E-4 0.0 0.0 25.23253332773644 0.0 20 3.498056829431251E-4 0.0 0.0 25.848541135399287 0.0 21 3.498056829431251E-4 0.0 0.0 26.411728284937716 0.0 22 6.996113658862502E-4 0.0 0.0 27.12603148950758 0.0 23 6.996113658862502E-4 0.0 0.0 27.73504318351156 0.0 24 6.996113658862502E-4 0.0 0.0 28.233166476022568 0.0 25 6.996113658862502E-4 0.0 0.0 28.65887999216435 0.0 26 6.996113658862502E-4 0.0 0.0 29.07514875486667 0.0 27 6.996113658862502E-4 0.0 0.0 29.55298331776698 0.0 28 0.0010494170488293752 0.0 0.0 29.957358687249233 0.0 29 0.0010494170488293752 0.0 0.0 30.407558601197035 0.0 30 0.0010494170488293752 0.0 0.0 30.92771965173346 0.0 31 0.0010494170488293752 0.0 0.0 31.402405963487283 0.0 32 0.0010494170488293752 0.0 0.0 31.840362678532074 0.0 33 0.0010494170488293752 0.0 0.0 32.24578746506316 0.0 34 0.0010494170488293752 0.0 0.0 32.662056227765476 0.0 35 0.0010494170488293752 0.0 0.0 33.094765857566124 0.0 36 0.0010494170488293752 0.0 0.0 33.51383306573199 0.0 37 0.0010494170488293752 0.0 0.0 33.93429949662962 0.0 38 0.0010494170488293752 0.0 0.0 34.38205077079682 0.0 39 0.0010494170488293752 0.0 0.0 34.81546001196335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 80 0.0 45.0 31 TTGTGCG 40 6.7848305E-9 45.0 1 GCGAACC 35 1.2076453E-7 45.0 33 GCTATCC 45 3.8198777E-10 45.0 33 TACGGAG 45 3.8198777E-10 45.0 29 ACGGCCT 35 1.2076453E-7 45.0 8 GGAGTAT 25 3.883429E-5 45.0 8 CCGACGT 25 3.883429E-5 45.0 44 CTCGAAT 20 7.024386E-4 45.0 43 CATCGAA 135 0.0 45.0 42 AGTAGTA 20 7.024386E-4 45.0 28 CAATAGG 20 7.024386E-4 45.0 2 TCGAATA 20 7.024386E-4 45.0 44 CCTGACG 20 7.024386E-4 45.0 42 ATCGAAT 200 0.0 45.0 43 CGCCCAT 130 0.0 44.999996 38 CGATGAA 1360 0.0 44.00735 19 TCGAATG 205 0.0 43.90244 44 GAGCGCC 190 0.0 43.81579 35 CGAATGC 185 0.0 43.783783 45 >>END_MODULE