##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935505.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443637 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.174164914107706 31.0 31.0 33.0 28.0 34.0 2 31.183014491577573 31.0 31.0 34.0 28.0 34.0 3 30.980959658459508 31.0 31.0 34.0 27.0 34.0 4 34.79440623753204 35.0 35.0 37.0 32.0 37.0 5 34.83232913395411 35.0 35.0 37.0 33.0 37.0 6 35.02468008754906 36.0 35.0 37.0 32.0 37.0 7 35.50032346265077 37.0 35.0 37.0 33.0 37.0 8 35.26654900290102 37.0 35.0 37.0 33.0 37.0 9 37.17322946462987 39.0 37.0 39.0 34.0 39.0 10 36.22260541839387 37.0 35.0 39.0 32.0 39.0 11 36.643390880381936 38.0 35.0 39.0 32.0 39.0 12 36.80653101522191 39.0 37.0 39.0 33.0 39.0 13 36.93890275157392 39.0 37.0 39.0 33.0 39.0 14 37.98149162490955 40.0 37.0 41.0 33.0 41.0 15 38.18151777241303 40.0 37.0 41.0 34.0 41.0 16 38.07310706726445 40.0 37.0 41.0 34.0 41.0 17 38.032003642617724 40.0 37.0 41.0 33.0 41.0 18 38.00624609759781 39.0 37.0 41.0 34.0 41.0 19 37.880670458054674 39.0 37.0 41.0 33.0 41.0 20 38.02061595403449 39.0 37.0 41.0 34.0 41.0 21 37.923559126042235 39.0 37.0 41.0 34.0 41.0 22 38.039566131769895 40.0 37.0 41.0 34.0 41.0 23 38.10018325793385 40.0 37.0 41.0 34.0 41.0 24 38.091072205429214 40.0 37.0 41.0 34.0 41.0 25 37.6563654519348 39.0 36.0 41.0 33.0 41.0 26 37.794633901139896 40.0 36.0 41.0 33.0 41.0 27 37.87760939687177 40.0 36.0 41.0 33.0 41.0 28 37.80574208192734 40.0 36.0 41.0 33.0 41.0 29 37.799069960350465 40.0 36.0 41.0 33.0 41.0 30 37.522864413924 40.0 36.0 41.0 33.0 41.0 31 37.5075365670582 40.0 36.0 41.0 33.0 41.0 32 37.53860701429322 40.0 36.0 41.0 33.0 41.0 33 37.53742812254163 40.0 36.0 41.0 33.0 41.0 34 37.43485777786794 40.0 36.0 41.0 33.0 41.0 35 37.45963929969773 40.0 36.0 41.0 33.0 41.0 36 37.31904913251149 40.0 36.0 41.0 33.0 41.0 37 37.3342214468135 40.0 36.0 41.0 33.0 41.0 38 37.182987442436044 40.0 36.0 41.0 32.0 41.0 39 37.11169942993934 40.0 36.0 41.0 32.0 41.0 40 37.0517765650746 39.0 35.0 41.0 32.0 41.0 41 36.90878127838751 39.0 35.0 41.0 31.0 41.0 42 36.952294330725344 39.0 35.0 41.0 31.0 41.0 43 36.92461855075208 39.0 35.0 41.0 31.0 41.0 44 36.90160649359724 39.0 35.0 41.0 31.0 41.0 45 36.87969668895967 39.0 35.0 41.0 31.0 41.0 46 36.76382943712991 39.0 35.0 41.0 31.0 41.0 47 36.77317266143266 39.0 35.0 41.0 31.0 41.0 48 36.688779339865704 39.0 35.0 41.0 31.0 41.0 49 36.65872548953311 39.0 35.0 41.0 31.0 41.0 50 36.54735741157749 39.0 35.0 41.0 31.0 41.0 51 35.402644504403376 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 23.0 10 29.0 11 20.0 12 10.0 13 11.0 14 12.0 15 27.0 16 46.0 17 69.0 18 117.0 19 207.0 20 361.0 21 554.0 22 874.0 23 1213.0 24 1866.0 25 2716.0 26 3502.0 27 4232.0 28 4540.0 29 5298.0 30 6452.0 31 8313.0 32 11126.0 33 15962.0 34 27307.0 35 31777.0 36 36190.0 37 56076.0 38 102780.0 39 121898.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.202746840322156 21.202694996134227 24.37353061173888 12.221027551804742 2 35.09806440851417 22.96134001447129 24.540333651160743 17.400261925853794 3 33.73433685648401 22.064660972822374 27.16725611254246 17.03374605815115 4 29.19729418420916 25.082668938794555 26.08123308019845 19.63880379679783 5 23.220786363626118 31.24108223615253 26.13916332497064 19.39896807525071 6 23.339577176836016 36.00353442115964 26.346314667171583 14.310573734832758 7 79.29681248408045 6.332654850700009 9.585088709913736 4.785443955305802 8 79.93810254780372 5.33273825221972 9.407916832906182 5.321242367070375 9 74.36079497426951 6.99513340862011 12.26182667360928 6.382244943501106 10 36.93425029923113 22.494291504090054 23.72953563386282 16.841922562815995 11 29.39655619346448 26.25682709061688 23.653121809046585 20.693494906872058 12 24.729903051368574 22.67371747622493 30.6678658452744 21.928513627132094 13 24.473161616366536 23.606236630398275 32.296900393790416 19.62370135944477 14 22.08246832432822 25.9529750674538 30.619402800036966 21.345153808181013 15 21.133494275725422 25.648446815752518 33.298845677885296 19.91921323063676 16 22.58152498551744 24.665886749752612 31.360549277900624 21.392038986829323 17 22.54681192055667 25.198529428338933 28.96219206242942 23.292466588674976 18 22.92234416876861 25.094841052482096 31.212680637548267 20.770134141201027 19 22.769291109623406 27.971742663483884 28.50686484671026 20.75210138018245 20 23.105827512132667 26.918854829511513 29.349896424328897 20.62542123402692 21 22.993573574792002 27.797275700629122 29.662314008975805 19.54683671560307 22 21.43554302278665 26.0221757878626 28.71649569355126 23.825785495799494 23 20.404069092523844 27.174243807437158 29.484465903430056 22.937221196608938 24 21.241240022811443 25.720577859826843 30.101862558803706 22.93631955855801 25 21.2360556040186 27.128034857327048 27.858812497605022 23.777097041049327 26 19.998331969605783 26.89653928775102 29.608441135432795 23.4966876072104 27 21.50587079075911 25.66377466261831 29.637293553062527 23.19306099356005 28 19.808537159885223 25.360373458480694 31.370241886948115 23.46084749468597 29 20.977060073889238 25.596151808798634 29.687334464889087 23.73945365242304 30 22.03918969788363 26.158097724040154 29.216679402304134 22.586033175772084 31 21.776136796525087 27.26598547911919 27.9816606820441 22.97621704231162 32 21.631874708376444 26.92967448612266 28.46741818198212 22.971032623518777 33 20.483413241005596 27.48192779231669 28.37793060542741 23.656728361250302 34 20.528044324526583 26.63033065321423 29.769834346549096 23.071790675710098 35 20.439232976510073 26.51672425879717 28.3526847400014 24.691358024691358 36 20.96128140799798 28.59747947082863 27.9613738258982 22.479865295275193 37 19.735955296785434 28.483196847873376 29.532252720129293 22.248595135211897 38 19.04710382587566 28.995327260801062 28.62655729797109 23.33101161535219 39 20.64255235699457 28.1151031135816 28.631065488225733 22.611279041198095 40 21.18466223511565 27.06920297450393 28.73948746384995 23.006647326530473 41 19.853619062431672 27.046662023230706 27.566456359591285 25.533262554746333 42 20.739027628443978 26.57871187479854 28.661721181957322 24.020539314800164 43 20.84519550894087 25.389676695135886 29.86518257043484 23.899945225488405 44 20.231405405770932 26.26110987135879 29.08458942784303 24.422895295027242 45 20.83640453794431 25.227832664994125 28.996003489339255 24.939759307722305 46 21.455153650394355 26.80254352094167 28.059652373449463 23.68265045521451 47 19.992245912762012 25.93223739228243 29.978338145826427 24.09717854912913 48 18.98331293377243 25.499451127836497 30.198563239765846 25.318672698625228 49 20.649990870914735 24.786706248577104 30.705509233900692 23.857793646607476 50 19.86443871904282 23.849002675610915 31.12657420368454 25.159984401661717 51 19.967901685386927 24.06922776955033 28.285287295694456 27.677583249368286 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 159.0 1 350.0 2 541.0 3 1897.0 4 3253.0 5 2172.0 6 1091.0 7 1019.5 8 948.0 9 951.5 10 955.0 11 999.5 12 1044.0 13 1047.0 14 1050.0 15 1029.5 16 1009.0 17 981.5 18 954.0 19 1091.0 20 1228.0 21 1297.0 22 1366.0 23 1612.5 24 1859.0 25 2099.5 26 3077.5 27 3815.0 28 4341.0 29 4867.0 30 5970.0 31 7073.0 32 7756.0 33 8439.0 34 9509.5 35 10580.0 36 11910.5 37 13241.0 38 15275.5 39 17310.0 40 19594.0 41 21878.0 42 24796.5 43 27715.0 44 33324.5 45 38934.0 46 43867.0 47 48800.0 48 49276.5 49 49753.0 50 44215.5 51 38678.0 52 34086.5 53 29495.0 54 26678.5 55 23862.0 56 21775.5 57 19689.0 58 18247.5 59 16806.0 60 15426.5 61 14047.0 62 12410.0 63 10773.0 64 9338.0 65 7903.0 66 6299.0 67 4695.0 68 3791.5 69 2888.0 70 2458.5 71 2029.0 72 1618.5 73 1208.0 74 977.5 75 534.0 76 321.0 77 242.5 78 164.0 79 117.5 80 71.0 81 44.5 82 18.0 83 24.0 84 30.0 85 17.5 86 5.0 87 2.5 88 0.0 89 1.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443637.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.508288653364055 #Duplication Level Percentage of deduplicated Percentage of total 1 72.85595909162242 29.51270221001125 2 10.363562871980037 8.396203925909079 3 3.90754707439776 4.748641344489381 4 2.2432093125104866 3.6347428136435656 5 1.5494016682702216 3.138180500914698 6 1.1662652366347952 2.834604531119173 7 0.9684032515385003 2.7459850912324524 8 0.8651162183128454 2.803550199209877 9 0.7535773757567475 2.7473516873819026 >10 5.24314492021782 34.67370406423255 >50 0.05287530203546956 1.461952488497241 >100 0.028125160657164524 1.9400036607022237 >500 0.001125006426286581 0.3267518498293386 >1k 0.0016875096394298715 1.0356256328272968 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1992 0.4490157493626546 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1496 0.33721263104745547 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1057 0.23825785495799495 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 860 0.19385218094974044 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 574 0.12938506030831515 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 469 0.10571706147142822 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 468 0.10549165195869595 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2540951273225632E-4 0.0 0.0 0.19993823779351136 0.0 2 2.2540951273225632E-4 0.0 0.0 0.9751215520797408 0.0 3 2.2540951273225632E-4 0.0 0.0 1.3610226378773638 0.0 4 2.2540951273225632E-4 0.0 0.0 1.8630096227320985 0.0 5 2.2540951273225632E-4 0.0 0.0 3.192700338339679 0.0 6 2.2540951273225632E-4 0.0 0.0 4.184502194361606 0.0 7 2.2540951273225632E-4 0.0 0.0 5.027984591005709 0.0 8 2.2540951273225632E-4 0.0 0.0 6.518843108216853 0.0 9 2.2540951273225632E-4 0.0 0.0 7.088227537378533 0.0 10 2.2540951273225632E-4 0.0 0.0 8.350520808679168 0.0 11 2.2540951273225632E-4 0.0 0.0 10.003674175057537 0.0 12 2.2540951273225632E-4 0.0 0.0 11.297975597166152 0.0 13 2.2540951273225632E-4 0.0 0.0 11.888773930037395 0.0 14 2.2540951273225632E-4 0.0 0.0 12.124777689868068 0.0 15 2.2540951273225632E-4 0.0 0.0 12.512256642254817 0.0 16 2.2540951273225632E-4 0.0 0.0 13.330267763960174 0.0 17 2.2540951273225632E-4 0.0 0.0 14.33874992392429 0.0 18 2.2540951273225632E-4 0.0 0.0 15.433338517752127 0.0 19 2.2540951273225632E-4 0.0 0.0 16.04690321140933 0.0 20 4.5081902546451264E-4 0.0 0.0 16.65641053383735 0.0 21 4.5081902546451264E-4 0.0 0.0 17.44489300937478 0.0 22 4.5081902546451264E-4 0.0 0.0 18.241490227370576 0.0 23 4.5081902546451264E-4 0.0 0.0 19.073702148378064 0.0 24 4.5081902546451264E-4 0.0 0.0 19.74654954388385 0.0 25 4.5081902546451264E-4 0.0 0.0 20.361241285104715 0.0 26 4.5081902546451264E-4 0.0 0.0 20.911691315196883 0.0 27 4.5081902546451264E-4 0.0 0.0 21.489190486816923 0.0 28 4.5081902546451264E-4 0.0 0.0 22.063759334771447 0.0 29 6.76228538196769E-4 0.0 0.0 22.666278962304766 0.0 30 6.76228538196769E-4 0.0 0.0 23.332364072428586 0.0 31 9.016380509290253E-4 0.0 0.0 23.93916648070382 0.0 32 9.016380509290253E-4 0.0 0.0 24.528161537473203 0.0 33 0.0011270475636612817 0.0 0.0 25.107689394707837 0.0 34 0.0011270475636612817 0.0 0.0 25.675045138254923 0.0 35 0.0011270475636612817 0.0 0.0 26.319716344669178 0.0 36 0.001352457076393538 0.0 0.0 26.885719631139875 0.0 37 0.001352457076393538 0.0 0.0 27.45578028883975 0.0 38 0.001352457076393538 0.0 0.0 28.026517175077824 0.0 39 0.001352457076393538 0.0 0.0 28.625204840894696 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGACAC 30 2.1624764E-6 45.000004 34 CTTCGAA 20 7.0285983E-4 45.0 16 CGTATGG 40 6.7993824E-9 45.0 2 GCGCGAC 20 7.0285983E-4 45.0 9 CGCGACC 20 7.0285983E-4 45.0 10 CTACGGG 35 1.2096643E-7 45.0 3 AGCGCGT 20 7.0285983E-4 45.0 30 TTAACGG 45 3.8380676E-10 45.0 2 AGTACGG 45 3.8380676E-10 45.0 2 TACGTAG 20 7.0285983E-4 45.0 1 TAGGGCG 105 0.0 42.857143 5 CGTTTTT 1010 0.0 42.326733 1 AACGGGA 80 0.0 42.1875 4 CGGGTAT 55 6.002665E-11 40.909092 6 ATAGCGG 50 1.0786607E-9 40.500004 2 ACGGGCC 40 3.4518234E-7 39.375 5 ACGGGTA 105 0.0 38.57143 5 CCGTAGG 35 6.2396175E-6 38.571426 2 ATCCCGC 35 6.2396175E-6 38.571426 33 TGCGAGG 135 0.0 38.333336 2 >>END_MODULE