##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935504.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 269850 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.12135630906059 31.0 31.0 33.0 28.0 34.0 2 31.06912729294052 31.0 31.0 34.0 28.0 34.0 3 30.96834167129887 31.0 30.0 34.0 28.0 34.0 4 34.902175282564386 35.0 35.0 37.0 32.0 37.0 5 34.78669260700389 35.0 35.0 37.0 33.0 37.0 6 34.90553640911617 35.0 35.0 37.0 32.0 37.0 7 35.27712803409302 36.0 35.0 37.0 33.0 37.0 8 34.68606262738558 36.0 35.0 37.0 31.0 37.0 9 36.34408375023161 39.0 35.0 39.0 32.0 39.0 10 35.95362979433018 37.0 35.0 39.0 32.0 39.0 11 36.37833240689272 37.0 35.0 39.0 32.0 39.0 12 36.493740967204005 38.0 35.0 39.0 32.0 39.0 13 36.34882712618121 39.0 35.0 39.0 32.0 39.0 14 37.410491013526034 39.0 36.0 40.0 32.0 41.0 15 37.38673337039096 39.0 36.0 41.0 32.0 41.0 16 37.70390216787104 39.0 36.0 40.0 33.0 41.0 17 37.294400592921995 39.0 36.0 40.0 32.0 41.0 18 37.40903094311655 39.0 36.0 40.0 32.0 41.0 19 37.36100796738929 39.0 36.0 40.0 32.0 41.0 20 36.945818047063185 39.0 35.0 40.0 31.0 41.0 21 37.40469890680007 39.0 36.0 40.0 32.0 41.0 22 37.427711691680564 39.0 36.0 41.0 32.0 41.0 23 37.34249027237354 39.0 36.0 41.0 32.0 41.0 24 37.299618306466556 39.0 35.0 41.0 31.0 41.0 25 37.34462849731332 39.0 35.0 41.0 32.0 41.0 26 37.16811191402631 39.0 35.0 41.0 31.0 41.0 27 37.02273485269594 39.0 35.0 41.0 31.0 41.0 28 36.95468964239392 39.0 35.0 41.0 31.0 41.0 29 37.00100055586437 39.0 35.0 41.0 31.0 41.0 30 36.87716879748008 39.0 35.0 41.0 31.0 41.0 31 36.89875856957569 39.0 35.0 41.0 31.0 41.0 32 36.69597924773022 39.0 35.0 41.0 30.0 41.0 33 36.62122290161201 39.0 35.0 41.0 30.0 41.0 34 36.492047433759495 39.0 35.0 41.0 30.0 41.0 35 36.44449508986474 39.0 35.0 41.0 30.0 41.0 36 36.41908838243469 39.0 35.0 41.0 30.0 41.0 37 36.300974615527146 39.0 35.0 41.0 30.0 41.0 38 36.25756531406337 39.0 35.0 41.0 30.0 41.0 39 36.101385955160275 39.0 35.0 41.0 29.0 41.0 40 36.23342597739485 39.0 35.0 41.0 29.0 41.0 41 35.88632944228275 39.0 35.0 40.0 27.0 41.0 42 36.15642764498796 39.0 35.0 41.0 29.0 41.0 43 36.04320177876598 39.0 35.0 41.0 29.0 41.0 44 36.19675004632203 39.0 35.0 41.0 29.0 41.0 45 36.234656290531774 39.0 35.0 40.0 30.0 41.0 46 36.088912358717806 39.0 35.0 40.0 29.0 41.0 47 35.847719103205485 39.0 35.0 40.0 29.0 41.0 48 35.9939670187141 39.0 35.0 40.0 29.0 41.0 49 36.04596627756161 39.0 35.0 40.0 29.0 41.0 50 35.86644802668149 39.0 35.0 40.0 29.0 41.0 51 34.69229571984436 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 16.0 10 7.0 11 10.0 12 7.0 13 5.0 14 7.0 15 8.0 16 13.0 17 29.0 18 90.0 19 224.0 20 546.0 21 1329.0 22 2251.0 23 2607.0 24 2706.0 25 2746.0 26 2771.0 27 2594.0 28 2695.0 29 3173.0 30 4130.0 31 5836.0 32 8086.0 33 11429.0 34 18932.0 35 21553.0 36 22511.0 37 32176.0 38 55884.0 39 65466.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 54.7029831387808 17.30776357235501 18.608856772280895 9.380396516583286 2 26.28237909949972 38.87381878821567 19.464887900685564 15.378914211599037 3 25.605336297943303 38.715953307393 22.464332036316474 13.214378358347231 4 24.097832128960533 19.263294422827496 40.78413933666852 15.85473411154345 5 35.35371502686678 23.666481378543637 22.027422642208634 18.952380952380953 6 19.54011487863628 43.09949972206781 24.402075226977953 12.958310172317955 7 64.85528997591254 5.004632203075783 25.34593292569946 4.79414489531221 8 61.597183620529925 19.149527515286273 12.212710765239947 7.0405780989438576 9 57.805818047063184 5.712062256809339 12.367611636094127 24.11450806003335 10 42.184176394293125 16.590327959977767 23.94219010561423 17.28330554011488 11 35.10505836575876 20.220863442653325 23.521215490087087 21.152862701500833 12 23.78247174356124 17.182508801185843 30.08375023161015 28.95126922364277 13 26.11858439874004 20.969427459699833 36.57402260515101 16.337965536409115 14 20.56142301278488 31.644987956272004 25.828793774319063 21.96479525662405 15 15.405225125069483 21.09023531591625 40.41652770057439 23.088011858439874 16 16.677413377802484 23.344821196961274 27.17917361497128 32.79859181026496 17 17.231424865666114 27.31888085973689 31.42894200481749 24.020752269779507 18 17.293311098758572 24.183805818047063 31.094682230869005 27.428200852325368 19 17.656846396146005 26.227904391328515 27.050213081341486 29.06503613118399 20 22.714100426162684 24.99870298313878 34.43283305540115 17.854363535297388 21 19.673522327218826 34.002223457476376 28.26829720214934 18.055957013155457 22 16.44469149527515 22.21863998517695 33.49861033907727 27.838058180470632 23 20.099685010190846 29.31739855475264 29.315175097276263 21.26774133778025 24 22.209375579025384 25.161756531406336 25.83361126551788 26.795256624050403 25 16.513989253288862 36.127848804891606 24.977950713359274 22.380211228460254 26 16.57698721511951 21.999258847507875 34.76264591439689 26.66110802297573 27 24.605521586066335 28.16379470075968 24.92088197146563 22.309801741708355 28 14.53585325180656 26.48656661108023 35.169168056327585 23.808412080785622 29 21.305169538632573 20.578469520103763 34.19937002038169 23.91699092088197 30 17.366685195478972 33.36816750046322 29.076523994811932 20.188623309245877 31 21.07059477487493 21.476375764313506 29.945895868074857 27.507133592736704 32 28.634055957013153 26.946081156197888 23.349268111914025 21.07059477487493 33 20.97461552714471 23.205113952195664 23.823976283120253 31.996294237539374 34 21.64461738002594 20.095238095238095 34.40355753196221 23.856586992773764 35 20.052992403186956 24.3272188252733 24.911246989068 30.708541782471745 36 17.586436909394106 28.587363350009266 33.25180655919955 20.57439318139707 37 19.68093385214008 27.22030757828423 32.71447100240874 20.384287567166943 38 18.064480266814897 23.462664443209192 26.880118584398737 31.592736705577174 39 25.58384287567167 23.012043727997035 30.194923105428945 21.209190290902352 40 18.01852881230313 19.93626088567723 29.659811006114506 32.38539929590513 41 16.523624235686494 27.736890865295532 28.688901241430425 27.050583657587552 42 18.330924587733925 21.594960163053546 32.4124513618677 27.661663887344822 43 22.38688160088938 26.54548823420419 25.498980915323326 25.568649249583103 44 21.08764128219381 21.27922920140819 31.49379284787845 26.139336668519547 45 18.69816564758199 18.872707059477488 29.359273670557716 33.06985362238281 46 28.82638502871966 23.906244209746156 26.01037613488975 21.25699462664443 47 15.491939966648138 22.43060959792477 39.331480452103015 22.74596998332407 48 19.99295905132481 24.675931072818234 27.70205669816565 27.62905317769131 49 19.023531591624977 18.535482675560498 37.46525847693163 24.975727255882898 50 22.31424865666111 19.497128034093013 31.0213081341486 27.16731517509728 51 19.590513248100798 19.358161941819528 27.660552158606635 33.390772651473036 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 76.0 1 173.5 2 271.0 3 758.0 4 1245.0 5 829.5 6 414.0 7 405.0 8 396.0 9 413.0 10 430.0 11 422.5 12 415.0 13 403.5 14 392.0 15 390.5 16 389.0 17 425.5 18 462.0 19 453.5 20 445.0 21 502.0 22 559.0 23 660.5 24 762.0 25 880.0 26 1197.0 27 1396.0 28 1643.0 29 1890.0 30 2117.0 31 2344.0 32 2806.0 33 3268.0 34 4107.0 35 4946.0 36 5550.5 37 6155.0 38 6929.5 39 7704.0 40 8900.0 41 10096.0 42 12463.0 43 14830.0 44 36741.5 45 58653.0 46 44214.0 47 29775.0 48 30283.5 49 30792.0 50 25558.0 51 20324.0 52 18669.5 53 17015.0 54 15257.0 55 13499.0 56 12479.0 57 11459.0 58 10095.0 59 8731.0 60 7605.0 61 6479.0 62 5756.5 63 5034.0 64 4033.5 65 3033.0 66 2542.5 67 2052.0 68 1650.0 69 1248.0 70 978.0 71 708.0 72 620.0 73 532.0 74 417.5 75 218.0 76 133.0 77 112.0 78 91.0 79 84.0 80 77.0 81 41.5 82 6.0 83 4.5 84 3.0 85 8.0 86 13.0 87 9.5 88 6.0 89 3.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 269850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.72114137483787 #Duplication Level Percentage of deduplicated Percentage of total 1 74.20982521293344 27.25069483046137 2 10.553828765187905 7.750972762645915 3 3.8489484519436483 4.240133407448583 4 2.0657570742340448 3.0342783027607934 5 1.3886085657772576 2.5495645729108762 6 1.1433819077221168 2.519177320733741 7 0.876962822427643 2.2542153047989624 8 0.8224680095265006 2.416157124328331 9 0.6478827756024704 2.1411895497498614 >10 4.3454567472651675 25.08541782471744 >50 0.05651313930488839 1.427089123587178 >100 0.027247406450571183 2.179358903094312 >500 0.004036652807492028 1.0909764684083751 >1k 0.006054979211238041 4.852695942190106 >5k 0.002018326403746014 7.167685751343339 >10k+ 0.001009163201873007 4.040392810820826 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC 10903 4.040392810820826 No Hit GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 9922 3.6768575134333887 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 9420 3.49082823790995 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 3898 1.4445062071521215 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATGCTCAT 2177 0.8067444876783397 No Hit GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT 2146 0.7952566240503984 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA 1673 0.6199740596627756 No Hit GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 1635 0.6058921623123958 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC 1566 0.5803224013340745 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 889 0.32944228274967574 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 767 0.2842319807300352 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 723 0.2679266259032796 No Hit GAATGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT 565 0.20937557902538448 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATG 462 0.17120622568093385 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTAT 424 0.157124328330554 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTATGCTCATCGT 411 0.15230683713173984 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTATGCTCA 410 0.15193626088567724 No Hit TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 340 0.1259959236612933 No Hit CGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTG 325 0.1204372799703539 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAACACCCATCGAATGC 320 0.11858439874004076 No Hit ACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 286 0.10598480637391144 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2783027607930332 0.0 2 0.0 0.0 0.0 2.3457476375764315 0.0 3 0.0 0.0 0.0 2.848619603483417 0.0 4 0.0 0.0 0.0 4.0014823049842505 0.0 5 3.7057624606262737E-4 0.0 0.0 9.088011858439874 0.0 6 3.7057624606262737E-4 0.0 0.0 10.031498980915323 0.0 7 3.7057624606262737E-4 0.0 0.0 11.609042060403928 0.0 8 3.7057624606262737E-4 0.0 0.0 13.343709468223087 0.0 9 3.7057624606262737E-4 0.0 0.0 13.745043542708911 0.0 10 3.7057624606262737E-4 0.0 0.0 18.34871224754493 0.0 11 3.7057624606262737E-4 0.0 0.0 19.920696683342598 0.0 12 3.7057624606262737E-4 0.0 0.0 25.28775245506763 0.0 13 3.7057624606262737E-4 0.0 0.0 25.988141560125996 0.0 14 3.7057624606262737E-4 0.0 0.0 26.35019455252918 0.0 15 3.7057624606262737E-4 0.0 0.0 27.349638688160088 0.0 16 3.7057624606262737E-4 0.0 0.0 28.332777468964238 0.0 17 3.7057624606262737E-4 0.0 0.0 29.392625532703352 0.0 18 3.7057624606262737E-4 0.0 0.0 30.416898276820454 0.0 19 3.7057624606262737E-4 0.0 0.0 31.92514359829535 0.0 20 3.7057624606262737E-4 0.0 0.0 32.63516768575134 0.0 21 3.7057624606262737E-4 0.0 0.0 33.40559570131555 0.0 22 3.7057624606262737E-4 0.0 0.0 34.28126737076153 0.0 23 3.7057624606262737E-4 0.0 0.0 35.046877895126926 0.0 24 3.7057624606262737E-4 0.0 0.0 35.687233648323144 0.0 25 3.7057624606262737E-4 0.0 0.0 36.23716879748008 0.0 26 3.7057624606262737E-4 0.0 0.0 36.77598665925514 0.0 27 3.7057624606262737E-4 0.0 0.0 37.35816194181953 0.0 28 3.7057624606262737E-4 0.0 0.0 37.8621456364647 0.0 29 3.7057624606262737E-4 0.0 0.0 38.397257735779135 0.0 30 3.7057624606262737E-4 0.0 0.0 38.97980359458958 0.0 31 3.7057624606262737E-4 0.0 0.0 39.526403557531964 0.0 32 3.7057624606262737E-4 0.0 0.0 40.00111172873819 0.0 33 3.7057624606262737E-4 0.0 0.0 40.52399481193255 0.0 34 3.7057624606262737E-4 0.0 0.0 41.02093755790254 0.0 35 3.7057624606262737E-4 0.0 0.0 41.53715026866778 0.0 36 3.7057624606262737E-4 0.0 0.0 42.04187511580508 0.0 37 3.7057624606262737E-4 0.0 0.0 42.54030016675931 0.0 38 3.7057624606262737E-4 0.0 0.0 43.025755049101356 0.0 39 3.7057624606262737E-4 0.0 0.0 43.539373726144156 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATAT 35 1.2073178E-7 45.000004 14 CGTAAGG 30 2.1593078E-6 45.000004 2 GCTACGA 35 1.2073178E-7 45.000004 10 AGCTACG 35 1.2073178E-7 45.000004 9 GGCGAAC 155 0.0 45.000004 32 AGGGCGT 30 2.1593078E-6 45.000004 6 TGATCCG 25 3.882848E-5 45.0 4 ACAACGG 20 7.0236844E-4 45.0 2 CAGCGGT 20 7.0236844E-4 45.0 28 GCGACAA 20 7.0236844E-4 45.0 11 CTCAACG 50 2.1827873E-11 45.0 43 CAACGTA 25 3.882848E-5 45.0 45 GCGGTTA 20 7.0236844E-4 45.0 30 CGTGCGG 25 3.882848E-5 45.0 2 AACCCGC 20 7.0236844E-4 45.0 21 CGGCCAA 40 6.7811925E-9 45.0 31 TAGCGAG 20 7.0236844E-4 45.0 1 TCGATGG 20 7.0236844E-4 45.0 1 ACGGGTC 25 3.882848E-5 45.0 5 ACGGGCG 20 7.0236844E-4 45.0 5 >>END_MODULE