##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935502.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 567833 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.295532313197718 31.0 31.0 33.0 28.0 34.0 2 31.291856936810646 31.0 31.0 34.0 28.0 34.0 3 31.098527207823427 31.0 31.0 34.0 28.0 34.0 4 34.89845429906328 35.0 35.0 37.0 32.0 37.0 5 34.92020365142568 35.0 35.0 37.0 33.0 37.0 6 35.10842096179687 37.0 35.0 37.0 33.0 37.0 7 35.59419935086548 37.0 35.0 37.0 33.0 37.0 8 35.3876738407243 37.0 35.0 37.0 33.0 37.0 9 37.2428988804807 39.0 37.0 39.0 34.0 39.0 10 36.4905984682116 38.0 35.0 39.0 32.0 39.0 11 36.77811081779326 39.0 37.0 39.0 33.0 39.0 12 36.90581737940556 39.0 37.0 39.0 33.0 39.0 13 36.97355032201369 39.0 37.0 39.0 33.0 39.0 14 38.004471385072726 40.0 37.0 41.0 33.0 41.0 15 38.21047209302735 40.0 37.0 41.0 34.0 41.0 16 38.14344006072208 40.0 37.0 41.0 34.0 41.0 17 38.06669566580315 40.0 37.0 41.0 34.0 41.0 18 38.05841330109381 40.0 37.0 41.0 34.0 41.0 19 37.95876076240726 39.0 37.0 41.0 34.0 41.0 20 38.07791727497345 40.0 37.0 41.0 34.0 41.0 21 38.00625183812846 40.0 37.0 41.0 34.0 41.0 22 38.135152412769244 40.0 37.0 41.0 34.0 41.0 23 38.197799352978784 40.0 37.0 41.0 34.0 41.0 24 38.190633513726745 40.0 37.0 41.0 34.0 41.0 25 37.78166115741776 40.0 36.0 41.0 33.0 41.0 26 37.906976170810786 40.0 36.0 41.0 34.0 41.0 27 37.98474727604771 40.0 37.0 41.0 34.0 41.0 28 37.906211861586065 40.0 36.0 41.0 34.0 41.0 29 37.91005630176478 40.0 36.0 41.0 34.0 41.0 30 37.617699217903855 40.0 36.0 41.0 33.0 41.0 31 37.62062613479667 40.0 36.0 41.0 33.0 41.0 32 37.6530494000877 40.0 36.0 41.0 33.0 41.0 33 37.66036669231975 40.0 36.0 41.0 33.0 41.0 34 37.601544820396136 40.0 36.0 41.0 33.0 41.0 35 37.6284911232704 40.0 36.0 41.0 33.0 41.0 36 37.48863838487724 40.0 36.0 41.0 33.0 41.0 37 37.51834782409617 40.0 36.0 41.0 33.0 41.0 38 37.38265652049106 40.0 36.0 41.0 33.0 41.0 39 37.34116016504853 40.0 36.0 41.0 33.0 41.0 40 37.26529631071107 40.0 35.0 41.0 33.0 41.0 41 37.12790204162139 39.0 35.0 41.0 32.0 41.0 42 37.181836913317824 39.0 35.0 41.0 32.0 41.0 43 37.14407052777841 39.0 35.0 41.0 32.0 41.0 44 37.112429182523734 39.0 35.0 41.0 32.0 41.0 45 37.087133012699155 39.0 35.0 41.0 32.0 41.0 46 36.986922211283954 39.0 35.0 41.0 32.0 41.0 47 36.98475432037236 39.0 35.0 41.0 32.0 41.0 48 36.92555205491755 39.0 35.0 41.0 32.0 41.0 49 36.92957612537489 39.0 35.0 41.0 32.0 41.0 50 36.84394531490773 39.0 35.0 41.0 32.0 41.0 51 35.76697374051878 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 3.0 8 14.0 9 24.0 10 24.0 11 25.0 12 26.0 13 18.0 14 16.0 15 27.0 16 49.0 17 78.0 18 135.0 19 240.0 20 391.0 21 651.0 22 950.0 23 1424.0 24 1983.0 25 2692.0 26 3609.0 27 4272.0 28 5004.0 29 5802.0 30 7572.0 31 9917.0 32 13673.0 33 20254.0 34 37070.0 35 40684.0 36 45256.0 37 71752.0 38 131274.0 39 162904.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.56914797132255 20.860182483230105 24.191091394829115 11.379578150618228 2 34.1345078570636 23.234295998999706 24.91154969859096 17.719646445345727 3 33.748478866145504 23.032123881493327 26.57682804627417 16.642569206087003 4 29.243457143209362 25.291767121671338 25.73555957473412 19.72921616038518 5 24.799721044743787 30.230190918808873 24.839521479026406 20.13056655742093 6 25.282433391507713 34.65508344883091 25.184693386964124 14.877789772697254 7 79.76183138352297 6.29903510363082 9.25923643042937 4.679897082416837 8 80.77392472786893 5.242210297745992 8.850841708741832 5.133023265643244 9 73.92842613937547 7.546761107579165 11.39595620543364 7.1288565476117105 10 38.23994026412695 26.41022976825933 19.92540060193754 15.424429365676176 11 28.872221234060014 26.40494652477049 25.516481078063446 19.206351163106053 12 26.314955277343866 22.2371718445388 30.318949409421432 21.128923468695902 13 24.918770131359043 23.554108338190982 31.926288186843664 19.600833343606308 14 21.29182347626855 26.377825874861095 30.938673870662676 21.391676778207678 15 20.09710601532493 25.957808017498103 33.51742501756678 20.427660949610186 16 23.647093423594615 25.710728330336558 30.227901513297045 20.414276732771782 17 22.718651434488663 25.15422668284513 29.054140918192495 23.07298096447371 18 24.087892038680387 24.986043431783642 30.466704118992734 20.45936041054324 19 23.80629516072507 27.132096936951534 27.95716346179246 21.10444444053093 20 23.931331923294348 27.515132089892624 28.72587538941907 19.827660597393955 21 23.501628119535145 27.583109822782404 29.55728180644661 19.357980251235837 22 21.888477774275184 24.835823208584216 29.502512182278945 23.773186834861658 23 21.58539570613191 26.157866837608946 30.026433828255843 22.230303628003302 24 22.29458309045089 25.45272993996474 29.611699214381694 22.640987755202673 25 21.651964574091327 26.631245454209246 28.163209957857326 23.553580013842097 26 20.553226036528347 26.906326331861656 29.77371868137287 22.76672895023713 27 21.26804888056876 26.873218005998247 29.348417580521037 22.510315532911964 28 19.150348782124322 27.123995963601978 30.342724005121223 23.38293124915248 29 21.253431906916294 25.76021471101539 30.73685396938889 22.249499412679434 30 21.573772570456455 26.574010316413453 30.483610498157027 21.368606614973064 31 22.368372391178394 27.603538364272595 28.006121518122406 22.02196772642661 32 23.087950154358765 26.949648928470165 27.99379394998177 21.968606967189295 33 22.07127799898914 26.324993439972665 28.67991117106614 22.92381738997205 34 20.45812765372918 25.406941829728108 29.982406799182154 24.152523717360562 35 20.78480820945595 25.620913191026233 29.81369522377178 23.780583375746037 36 20.650966041071936 27.6403449605782 30.073983019655426 21.63470597869444 37 20.685835448098295 28.136441524180523 28.528986515401535 22.64873651231964 38 20.65343155470006 27.909085946043994 28.413107374879587 23.024375124376355 39 21.548765217942602 24.370017240984584 29.673337055084858 24.407880485987956 40 22.182930544720016 23.02455123249265 30.824379703187383 23.96813851959995 41 19.06511245383766 25.074801922396194 29.570313807052422 26.28977181671372 42 20.552169387830578 25.24985338999318 30.125934913962382 24.07204230821386 43 21.329334505039334 25.180819008405642 29.993501610508723 23.4963448760463 44 21.388330723998077 24.933210996895212 29.298755091725916 24.379703187380798 45 21.629598843321894 24.039990631048212 28.89511528917833 25.43529523645156 46 22.119707730970198 24.88231575128603 29.19432297876312 23.80365353898065 47 19.080257751839007 25.521412105319698 31.08766133704804 24.310668805793252 48 19.4902374465732 24.936909267337406 31.10773766230564 24.465115623783753 49 21.921586100138597 23.31671459742565 31.77853347727237 22.983165825163386 50 20.298925916598716 23.190268969926016 31.265530534505743 25.24527457896952 51 19.590795180977505 23.07632701868331 29.774951438186932 27.55792636215225 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 243.0 1 472.5 2 702.0 3 1976.0 4 3250.0 5 2092.5 6 935.0 7 955.0 8 975.0 9 983.0 10 991.0 11 973.0 12 955.0 13 1027.5 14 1100.0 15 1028.5 16 957.0 17 963.0 18 969.0 19 1064.5 20 1160.0 21 1409.0 22 1658.0 23 1923.5 24 2189.0 25 2694.0 26 4224.0 27 5249.0 28 6087.0 29 6925.0 30 8179.0 31 9433.0 32 10351.0 33 11269.0 34 13382.0 35 15495.0 36 17138.0 37 18781.0 38 20957.5 39 23134.0 40 26075.5 41 29017.0 42 32709.5 43 36402.0 44 44089.5 45 51777.0 46 55553.0 47 59329.0 48 59492.0 49 59655.0 50 52412.0 51 45169.0 52 40360.5 53 35552.0 54 32682.0 55 29812.0 56 27060.0 57 24308.0 58 23243.0 59 22178.0 60 20313.5 61 18449.0 62 16755.0 63 15061.0 64 12755.0 65 10449.0 66 9001.5 67 7554.0 68 6425.5 69 5297.0 70 4389.5 71 3482.0 72 2758.0 73 2034.0 74 1698.0 75 1045.0 76 728.0 77 540.0 78 352.0 79 264.0 80 176.0 81 131.5 82 87.0 83 53.0 84 19.0 85 13.0 86 7.0 87 6.0 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 567833.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.420885759512316 #Duplication Level Percentage of deduplicated Percentage of total 1 72.13393480341696 25.550478640559422 2 10.249909167036778 7.261217233019755 3 3.7365378355985683 3.97054439432497 4 2.0043009653946333 2.8397646209169425 5 1.3531340273364652 2.396460289979687 6 1.073076792389268 2.280559828464251 7 0.8610596041550042 2.134964570963371 8 0.7891138541638478 2.236088934366889 9 0.6876345125100176 2.192096116072375 >10 7.016991940760119 44.163087616955195 >50 0.05869074562180952 1.4123933998710654 >100 0.03059944857198952 1.7459023206831334 >500 0.003009781826753068 0.7434210573720975 >1k 0.0020065212178353785 1.073020976450788 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2060 0.3627827195671967 No Hit GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1753 0.3087175278647067 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1219 0.2146757937633072 No Hit GAATCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1007 0.17734087310881896 No Hit CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 950 0.16730271048001788 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGC 805 0.14176703361727833 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCG 787 0.1385970875239727 No Hit CGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 630 0.11094811326569608 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.522162325895114E-4 0.0 0.0 0.1717054133873868 0.0 2 3.522162325895114E-4 0.0 0.0 0.8759617704501147 0.0 3 3.522162325895114E-4 0.0 0.0 1.2362789763891848 0.0 4 3.522162325895114E-4 0.0 0.0 1.7175824582227521 0.0 5 3.522162325895114E-4 0.0 0.0 3.0998550630202892 0.0 6 3.522162325895114E-4 0.0 0.0 3.9553882919802126 0.0 7 3.522162325895114E-4 0.0 0.0 4.744352652980718 0.0 8 3.522162325895114E-4 0.0 0.0 5.997890224766789 0.0 9 3.522162325895114E-4 0.0 0.0 6.447318137551005 0.0 10 3.522162325895114E-4 0.0 0.0 7.581982730838116 0.0 11 3.522162325895114E-4 0.0 0.0 9.072385719040634 0.0 12 3.522162325895114E-4 0.0 0.0 10.345999616084306 0.0 13 3.522162325895114E-4 0.0 0.0 10.862524721176825 0.0 14 3.522162325895114E-4 0.0 0.0 11.067690676660215 0.0 15 3.522162325895114E-4 0.0 0.0 11.466575560067836 0.0 16 3.522162325895114E-4 0.0 0.0 12.255716029184637 0.0 17 3.522162325895114E-4 0.0 0.0 13.17676147740621 0.0 18 3.522162325895114E-4 0.0 0.0 14.19924520061356 0.0 19 3.522162325895114E-4 0.0 0.0 14.81174922908672 0.0 20 5.28324348884267E-4 0.0 0.0 15.409284067674827 0.0 21 5.28324348884267E-4 0.0 0.0 16.140484966530654 0.0 22 5.28324348884267E-4 0.0 0.0 16.924870516507493 0.0 23 5.28324348884267E-4 0.0 0.0 17.692878011668924 0.0 24 5.28324348884267E-4 0.0 0.0 18.302035985932484 0.0 25 5.28324348884267E-4 0.0 0.0 18.856600444144668 0.0 26 5.28324348884267E-4 0.0 0.0 19.36432014342245 0.0 27 5.28324348884267E-4 0.0 0.0 19.90726146595918 0.0 28 5.28324348884267E-4 0.0 0.0 20.464291437799496 0.0 29 5.28324348884267E-4 0.0 0.0 20.997546813940016 0.0 30 5.28324348884267E-4 0.0 0.0 21.633825438112968 0.0 31 5.28324348884267E-4 0.0 0.0 22.198780275186543 0.0 32 5.28324348884267E-4 0.0 0.0 22.755458030794266 0.0 33 7.044324651790228E-4 0.0 0.0 23.306676434796852 0.0 34 7.044324651790228E-4 0.0 0.0 23.829013107727096 0.0 35 7.044324651790228E-4 0.0 0.0 24.41386816194198 0.0 36 7.044324651790228E-4 0.0 0.0 24.948004078663974 0.0 37 7.044324651790228E-4 0.0 0.0 25.471397400291988 0.0 38 7.044324651790228E-4 0.0 0.0 26.035823913016678 0.0 39 7.044324651790228E-4 0.0 0.0 26.637761454512155 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGGCA 20 7.030269E-4 45.0 41 TTACGTT 20 7.030269E-4 45.0 25 ACGTAAG 20 7.030269E-4 45.0 1 TCACGAC 30 2.163555E-6 44.999996 25 TCTACGG 30 2.163555E-6 44.999996 2 TACGCGG 45 1.9254003E-8 40.0 2 AATTGCG 45 1.9254003E-8 40.0 1 GGCGATA 145 0.0 38.793102 8 ACCGGGT 35 6.242706E-6 38.571426 4 GCGAACG 35 6.242706E-6 38.571426 1 CACGACG 35 6.242706E-6 38.571426 26 TAGCCGT 35 6.242706E-6 38.571426 44 GCGATTA 35 6.242706E-6 38.571426 9 GTTCACG 35 6.242706E-6 38.571426 1 CGTTTTT 950 0.0 37.894737 1 CGTTAGG 90 0.0 37.5 2 CGTAAGG 90 0.0 37.5 2 CGCATCG 30 1.13919465E-4 37.499996 21 ATTCGCA 30 1.13919465E-4 37.499996 13 TAACGCC 30 1.13919465E-4 37.499996 12 >>END_MODULE