##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935499.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 675889 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.11314727714166 31.0 31.0 33.0 28.0 34.0 2 31.15455940250544 31.0 31.0 34.0 28.0 34.0 3 30.945705581833703 31.0 30.0 34.0 27.0 34.0 4 34.73818482028854 35.0 35.0 37.0 32.0 37.0 5 34.72700842889883 35.0 35.0 37.0 32.0 37.0 6 34.905499275768655 35.0 35.0 37.0 32.0 37.0 7 35.21483705164606 36.0 35.0 37.0 33.0 37.0 8 34.95172728066295 37.0 35.0 37.0 32.0 37.0 9 36.70707912097993 39.0 37.0 39.0 32.0 39.0 10 36.249523220528815 37.0 35.0 39.0 32.0 39.0 11 36.58843981778073 38.0 35.0 39.0 32.0 39.0 12 36.69990338650281 39.0 35.0 39.0 33.0 39.0 13 36.682797027322536 39.0 35.0 39.0 32.0 39.0 14 37.727171177515835 40.0 37.0 41.0 33.0 41.0 15 37.814846816563076 40.0 37.0 41.0 33.0 41.0 16 37.924008232120954 40.0 37.0 41.0 33.0 41.0 17 37.699179894923574 39.0 36.0 41.0 33.0 41.0 18 37.639078310195906 39.0 36.0 40.0 33.0 41.0 19 37.442531244035635 39.0 36.0 40.0 33.0 41.0 20 37.15493520385744 39.0 35.0 40.0 32.0 41.0 21 37.330589786192704 39.0 35.0 40.0 33.0 41.0 22 37.42445283175196 39.0 35.0 41.0 33.0 41.0 23 37.4293071791374 39.0 35.0 41.0 33.0 41.0 24 37.419355840973886 39.0 35.0 41.0 33.0 41.0 25 37.176779027325495 39.0 35.0 41.0 32.0 41.0 26 37.121861725815926 39.0 35.0 41.0 32.0 41.0 27 37.11671738998563 39.0 35.0 41.0 32.0 41.0 28 36.97092126073956 39.0 35.0 41.0 32.0 41.0 29 36.96846375662276 39.0 35.0 41.0 32.0 41.0 30 36.63052069200712 39.0 35.0 41.0 31.0 41.0 31 36.53855292806955 39.0 35.0 41.0 30.0 41.0 32 36.257558563610296 39.0 35.0 41.0 30.0 41.0 33 36.01915551222168 39.0 35.0 41.0 29.0 41.0 34 35.674058906122156 39.0 35.0 41.0 26.0 41.0 35 35.66485473206399 39.0 35.0 41.0 26.0 41.0 36 35.38019704418921 39.0 35.0 41.0 24.0 41.0 37 35.330971505676224 39.0 35.0 41.0 24.0 41.0 38 35.15986500741986 38.0 35.0 40.0 24.0 41.0 39 35.061328117486745 38.0 35.0 40.0 23.0 41.0 40 34.90269260189173 38.0 34.0 40.0 23.0 41.0 41 34.701674387362424 38.0 34.0 40.0 21.0 41.0 42 34.798992142200866 38.0 34.0 40.0 22.0 41.0 43 34.80733818718754 38.0 35.0 40.0 22.0 41.0 44 34.88783809175767 38.0 35.0 40.0 22.0 41.0 45 34.96602548643342 38.0 35.0 40.0 23.0 41.0 46 34.879858970925696 38.0 35.0 40.0 23.0 41.0 47 34.723129093682545 38.0 34.0 40.0 23.0 41.0 48 34.76024169649158 38.0 34.0 40.0 23.0 41.0 49 34.76776660072882 38.0 34.0 40.0 23.0 41.0 50 34.58979802896629 38.0 34.0 40.0 22.0 41.0 51 33.43904250550016 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 13.0 9 27.0 10 34.0 11 29.0 12 14.0 13 32.0 14 27.0 15 39.0 16 80.0 17 145.0 18 356.0 19 825.0 20 1778.0 21 2964.0 22 4122.0 23 5614.0 24 7454.0 25 9796.0 26 11985.0 27 12135.0 28 11590.0 29 11697.0 30 12905.0 31 16060.0 32 21105.0 33 28966.0 34 46203.0 35 51290.0 36 53516.0 37 78209.0 38 134612.0 39 152240.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.21202593917049 17.136541651069926 19.404813512277904 17.246618897481685 2 36.327710615204566 29.404976260894912 19.91658393611969 14.350729187780834 3 26.63558661259467 29.578525467939258 29.498630692317825 14.287257227148245 4 23.977161930435322 20.470521047095012 38.86969605956008 16.68262096290959 5 27.56547302885533 24.72713714825955 29.175500710915546 18.53188911196957 6 20.947078588348088 34.442341863826755 31.22435784574094 13.386221702084217 7 66.83316343364073 4.900804717934454 23.463320160558908 4.802711687865907 8 65.78313894737153 10.216914315812211 17.861364809902216 6.138581926914035 9 60.398822883639184 5.794886438453652 18.96805540554736 14.838235272359809 10 37.1592080948203 18.320315909860938 28.105946390605556 16.4145296047132 11 29.30362825848623 21.46905778907483 30.00862567670135 19.218688275737584 12 22.71408470917562 18.15135325475041 35.99392799705277 23.140634039021197 13 24.03811868516872 19.323883063639148 39.927414116815044 16.710584134377093 14 18.492829443887977 26.65437668019453 35.37770255175036 19.475091324167135 15 16.558784060696357 22.864109343398102 40.70875543173509 19.86835116417045 16 19.937445349754178 24.049215181782806 32.296427371950124 23.71691209651289 17 19.45275037765077 25.98281670510986 33.207671673899114 21.35676124334025 18 19.985678121703415 23.646190424759094 33.67668359745461 22.691447856082878 19 19.117636179905283 25.875994431038237 31.073001631924768 23.93336775713172 20 21.0151371009145 26.343970681576412 34.16862828067922 18.472263936829865 21 19.495360924648867 28.808724509497864 34.408460560831735 17.287454005021534 22 18.207575504261793 21.71599182706036 36.51309608530395 23.563336583373896 23 19.948541846368265 25.158568936615332 34.805715139616126 20.087174077400284 24 21.15702430428665 24.86073896749318 31.925952338327747 22.056284389892422 25 19.092336167625156 29.81391914944614 29.982881804556666 21.110862878372043 26 18.369288448251115 22.677392293705033 34.59798872300037 24.355330535043475 27 23.67060271731009 22.988686012052277 31.338725737510153 22.00198553312748 28 17.98534966540364 24.242738082732522 34.88664558825488 22.885266663608967 29 20.676176117676125 21.478378846230665 35.79300743169366 22.05243760439954 30 22.631674727654985 24.902757701338533 33.574299922028615 18.891267648977863 31 21.42126887699016 22.601492256864663 33.231344200009175 22.745894666136007 32 23.264914801098996 24.983244290112726 30.03170638965866 21.72013451912962 33 22.528403332499863 25.909431874168686 28.528796888246443 23.033367905085004 34 19.237922203202004 27.4318712096217 32.03262665911119 21.29757992806511 35 21.798105902004618 28.67512269026423 28.36885938371537 21.157912024015776 36 22.939861426950284 28.173708996595593 30.554425356826343 18.33200421962778 37 21.447012749134846 26.1723448672785 30.97727585446723 21.403366529119427 38 20.294456634151466 27.45731917519001 28.834616334930736 23.41360785572779 39 22.318161709984924 26.171605100837564 28.17311718344284 23.33711600573467 40 21.02889675671597 27.20786993130529 30.911880501088195 20.851352810890546 41 20.674252724929683 27.829421694982457 28.89424151007044 22.602084070017415 42 20.636968496306345 25.53422233532429 32.80168785111165 21.027121317257716 43 24.33861181347825 22.928616977048005 29.83581623609794 22.896954973375806 44 21.746470204427055 22.335176338126526 30.778574588430942 25.139778869015473 45 19.907410832252044 22.09874698360234 30.1018362482597 27.892005935885923 46 24.42679197323821 24.304582557195044 29.237641091954448 22.0309843776123 47 18.962285227308033 23.805388162849226 35.17796561269676 22.05436099714598 48 19.727943493680176 24.814429588290384 31.099485270510396 24.358141647519048 49 19.803251717367793 21.672789466909506 35.57758744409215 22.94637137163055 50 20.327894077281922 22.05036625836491 33.52281217773924 24.098927486613928 51 19.308791828243987 21.75312810239551 31.21059818993947 27.727481879421028 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 276.0 1 525.5 2 775.0 3 9638.5 4 18502.0 5 11798.5 6 5095.0 7 4895.5 8 4696.0 9 4618.0 10 4540.0 11 4525.5 12 4511.0 13 4362.5 14 4214.0 15 4007.5 16 3801.0 17 3616.0 18 3431.0 19 3224.5 20 3018.0 21 2948.5 22 2879.0 23 2960.0 24 3041.0 25 3562.5 26 4524.5 27 4965.0 28 5409.0 29 5853.0 30 6978.5 31 8104.0 32 9683.5 33 11263.0 34 12837.5 35 14412.0 36 15774.5 37 17137.0 38 18788.5 39 20440.0 40 23040.5 41 25641.0 42 29844.0 43 34047.0 44 67454.5 45 100862.0 46 82834.0 47 64806.0 48 65521.0 49 66236.0 50 58168.0 51 50100.0 52 44439.5 53 38779.0 54 36097.5 55 33416.0 56 31192.5 57 28969.0 58 26635.0 59 24301.0 60 21727.0 61 19153.0 62 16616.5 63 14080.0 64 12197.5 65 10315.0 66 8831.0 67 7347.0 68 6178.0 69 5009.0 70 4092.5 71 3176.0 72 2551.0 73 1926.0 74 1596.0 75 1041.5 76 817.0 77 561.5 78 306.0 79 217.5 80 129.0 81 107.0 82 85.0 83 64.5 84 44.0 85 35.0 86 26.0 87 16.0 88 6.0 89 6.0 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 675889.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.960345761535585 #Duplication Level Percentage of deduplicated Percentage of total 1 75.12890197736739 30.021768997001157 2 9.386273020518582 7.501574306241911 3 3.7632522566357003 4.51142584089125 4 2.207826340707839 3.5290201582444447 5 1.59491436697934 3.1866664782267544 6 1.2388765973032383 2.970356231046725 7 1.0225134257793047 2.860199302796729 8 0.8421702097759968 2.692273021817103 9 0.7129257406073998 2.5639883187273473 >10 4.027867633985944 24.56827196342294 >50 0.04154324528241312 1.1469524541903025 >100 0.024701388792621952 1.8667701656251792 >500 0.0014970538662195116 0.40185959261615567 >1k 0.004865425065213412 3.9741775044991092 >5k 0.0011227903996646337 3.5974434837324187 >10k+ 7.485269331097558E-4 4.607252180920467 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC 18315 2.7097644731605337 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12491 1.848084522754476 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGC 9387 1.3888375162193793 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCG 9193 1.3601345783109355 No Hit GAACTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT 5474 0.8098962995403091 No Hit GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 4635 0.6857634907507002 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT 3046 0.4506657158202012 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT 2366 0.350057479852461 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTT 2298 0.3399966562556869 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC 2137 0.3161761768574426 No Hit CGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTG 2128 0.3148445972637519 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTCAAAGT 1906 0.28199896728604845 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTC 1725 0.25521942212404697 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTA 1507 0.22296560529909498 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCT 1442 0.21334864156688452 No Hit CGTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCT 1216 0.17991119843642966 No Hit CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT 1108 0.16393224331214148 No Hit CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 1059 0.15668253219093667 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCC 828 0.12250532261954256 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTC 690 0.10208776884961879 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.959065763757067E-4 0.0 0.0 0.17162581429790985 0.0 2 2.959065763757067E-4 0.0 0.0 1.1454543571503606 0.0 3 2.959065763757067E-4 0.0 0.0 1.6933253833099813 0.0 4 2.959065763757067E-4 0.0 0.0 3.025496790153413 0.0 5 2.959065763757067E-4 0.0 0.0 6.955432030999173 0.0 6 2.959065763757067E-4 0.0 0.0 8.835326510714037 0.0 7 2.959065763757067E-4 0.0 0.0 10.2328932709365 0.0 8 2.959065763757067E-4 0.0 0.0 11.851058383847052 0.0 9 2.959065763757067E-4 0.0 0.0 12.568335924981765 0.0 10 2.959065763757067E-4 0.0 0.0 15.059721344777026 0.0 11 2.959065763757067E-4 0.0 0.0 16.374286310326102 0.0 12 2.959065763757067E-4 0.0 0.0 18.83918809153574 0.0 13 2.959065763757067E-4 0.0 0.0 19.475091324167135 0.0 14 2.959065763757067E-4 0.0 0.0 19.86346870566025 0.0 15 2.959065763757067E-4 0.0 0.0 20.4182935363647 0.0 16 2.959065763757067E-4 0.0 0.0 21.03437102837892 0.0 17 2.959065763757067E-4 0.0 0.0 21.674860812944136 0.0 18 2.959065763757067E-4 0.0 0.0 22.37911846471832 0.0 19 2.959065763757067E-4 0.0 0.0 23.124507130608723 0.0 20 2.959065763757067E-4 0.0 0.0 23.61615590725696 0.0 21 2.959065763757067E-4 0.0 0.0 24.14198189347659 0.0 22 2.959065763757067E-4 0.0 0.0 24.740748850772835 0.0 23 2.959065763757067E-4 0.0 0.0 25.277671333606555 0.0 24 2.959065763757067E-4 0.0 0.0 25.714577393625284 0.0 25 2.959065763757067E-4 0.0 0.0 26.132693386044156 0.0 26 2.959065763757067E-4 0.0 0.0 26.580843895965167 0.0 27 5.918131527514134E-4 0.0 0.0 27.03816750975382 0.0 28 5.918131527514134E-4 0.0 0.0 27.447406304881422 0.0 29 5.918131527514134E-4 0.0 0.0 27.893633422055988 0.0 30 5.918131527514134E-4 0.0 0.0 28.49728283786243 0.0 31 5.918131527514134E-4 0.0 0.0 28.970733360063562 0.0 32 5.918131527514134E-4 0.0 0.0 29.44758680789301 0.0 33 7.397664409392666E-4 0.0 0.0 29.930358387249978 0.0 34 7.397664409392666E-4 0.0 0.0 30.3893094872087 0.0 35 7.397664409392666E-4 0.0 0.0 30.873412646159355 0.0 36 7.397664409392666E-4 0.0 0.0 31.317420464011104 0.0 37 7.397664409392666E-4 0.0 0.0 31.775631797528884 0.0 38 7.397664409392666E-4 0.0 0.0 32.30515661595321 0.0 39 7.397664409392666E-4 0.0 0.0 32.97997156337801 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCG 20 7.0312206E-4 45.000004 1 CGTCGAA 35 1.2109376E-7 45.0 42 TTCGACG 25 3.889094E-5 45.0 1 AGTTACG 30 2.16417E-6 44.999996 1 CGTTTTT 5405 0.0 43.6679 1 CGATGAA 1255 0.0 43.565735 19 CCGATGA 1260 0.0 42.678574 18 GTCGAAT 170 0.0 42.35294 43 CACCGAT 1345 0.0 41.82156 16 CGACGGT 70 0.0 41.785713 28 CGTTTTC 180 0.0 41.25 1 GATGAAT 1375 0.0 40.909092 20 TACGGCT 1160 0.0 40.53879 7 CTCGTAA 50 1.0804797E-9 40.5 33 TCGTAAC 50 1.0804797E-9 40.5 34 GCTCGTA 50 1.0804797E-9 40.5 32 ACCGATG 1340 0.0 40.298504 17 CGGCGAA 185 0.0 40.135136 31 CCGTCGA 45 1.9263098E-8 40.0 41 GCGATCT 45 1.9263098E-8 40.0 9 >>END_MODULE