SRR2935495.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935495.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	250082
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	1453	0.5810094289073184	No Hit
CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	1220	0.48783998848377735	No Hit
CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT	802	0.32069481210163064	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	782	0.31269743524124083	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC	626	0.2503178957302005	No Hit
GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC	597	0.23872169928263529	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG	566	0.22632576514903113	No Hit
TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	412	0.16474596332402971	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC	327	0.1307571116673731	No Hit
ACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC	280	0.11196327604545708	No Hit
CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG	266	0.10636511224318423	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACTC	20	7.0226885E-4	45.000004	8
CCGATGT	20	7.0226885E-4	45.000004	10
CCGATAG	20	7.0226885E-4	45.000004	11
TGGACCG	20	7.0226885E-4	45.000004	1
GGTCATC	20	7.0226885E-4	45.000004	8
TTGTACG	20	7.0226885E-4	45.000004	1
AGGCGGC	20	7.0226885E-4	45.000004	20
TGACGGA	20	7.0226885E-4	45.000004	18
TATGCGG	40	6.7775545E-9	45.000004	2
TATTGCG	20	7.0226885E-4	45.000004	1
GTTCGTG	20	7.0226885E-4	45.000004	1
CGTAGTT	20	7.0226885E-4	45.000004	26
CGGATAT	20	7.0226885E-4	45.000004	21
TGCGAAG	20	7.0226885E-4	45.000004	1
ACGGATA	20	7.0226885E-4	45.000004	20
GACGGAT	20	7.0226885E-4	45.000004	19
CGGTCCT	20	7.0226885E-4	45.000004	21
TGTACGG	40	6.7775545E-9	45.000004	2
GCGCTAG	20	7.0226885E-4	45.000004	1
TCGAAGG	20	7.0226885E-4	45.000004	2