##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935495.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 250082 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13806271542934 31.0 31.0 33.0 28.0 34.0 2 31.131200966083124 31.0 31.0 34.0 28.0 34.0 3 30.95033628969698 31.0 30.0 34.0 27.0 34.0 4 34.79094057149255 35.0 35.0 37.0 32.0 37.0 5 34.80565574491567 35.0 35.0 37.0 32.0 37.0 6 35.00367079597892 36.0 35.0 37.0 32.0 37.0 7 35.459037435721086 37.0 35.0 37.0 33.0 37.0 8 35.13955822490223 37.0 35.0 37.0 32.0 37.0 9 36.97734343135451 39.0 37.0 39.0 32.0 39.0 10 36.32991978631009 37.0 35.0 39.0 32.0 39.0 11 36.65911980870275 38.0 35.0 39.0 32.0 39.0 12 36.78886125350885 39.0 35.0 39.0 33.0 39.0 13 36.83484217176766 39.0 37.0 39.0 33.0 39.0 14 37.809286554010285 39.0 37.0 41.0 33.0 41.0 15 38.03168560712086 40.0 37.0 41.0 33.0 41.0 16 37.94230692332915 39.0 37.0 41.0 33.0 41.0 17 37.93388968418359 39.0 37.0 41.0 33.0 41.0 18 37.917047208515605 39.0 37.0 41.0 33.0 41.0 19 37.78018809830375 39.0 37.0 41.0 33.0 41.0 20 37.915963563951024 39.0 36.0 41.0 34.0 41.0 21 37.85701090042466 39.0 36.0 41.0 33.0 41.0 22 38.00263913436393 40.0 37.0 41.0 34.0 41.0 23 38.04611687366544 40.0 37.0 41.0 34.0 41.0 24 38.0300621396182 40.0 37.0 41.0 34.0 41.0 25 37.61654977167489 39.0 36.0 41.0 33.0 41.0 26 37.74561143944786 39.0 36.0 41.0 33.0 41.0 27 37.790024871842036 40.0 36.0 41.0 33.0 41.0 28 37.73023648243376 40.0 36.0 41.0 33.0 41.0 29 37.71375788741293 40.0 36.0 41.0 33.0 41.0 30 37.44949656512664 39.0 36.0 41.0 33.0 41.0 31 37.43844019161715 39.0 36.0 41.0 33.0 41.0 32 37.44952455594565 39.0 36.0 41.0 33.0 41.0 33 37.453811149942815 40.0 36.0 41.0 33.0 41.0 34 37.393758847098155 40.0 36.0 41.0 33.0 41.0 35 37.41398021448965 40.0 36.0 41.0 33.0 41.0 36 37.265600882910405 40.0 36.0 41.0 32.0 41.0 37 37.24414392079398 40.0 36.0 41.0 32.0 41.0 38 37.103430074935424 39.0 35.0 41.0 32.0 41.0 39 37.036691965035466 39.0 35.0 41.0 32.0 41.0 40 36.955114722371064 39.0 35.0 41.0 31.0 41.0 41 36.7944034356731 39.0 35.0 41.0 31.0 41.0 42 36.84282755256276 39.0 35.0 41.0 31.0 41.0 43 36.80046944602171 39.0 35.0 41.0 31.0 41.0 44 36.76786014187346 39.0 35.0 41.0 31.0 41.0 45 36.75116961636583 39.0 35.0 41.0 31.0 41.0 46 36.64430466806888 39.0 35.0 41.0 31.0 41.0 47 36.61184331539255 39.0 35.0 41.0 31.0 41.0 48 36.545924936620786 39.0 35.0 41.0 31.0 41.0 49 36.55316256267944 39.0 35.0 41.0 31.0 41.0 50 36.422905287065845 39.0 35.0 40.0 31.0 41.0 51 35.18477139498245 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 13.0 10 12.0 11 12.0 12 7.0 13 13.0 14 6.0 15 5.0 16 13.0 17 34.0 18 53.0 19 131.0 20 212.0 21 348.0 22 555.0 23 794.0 24 1092.0 25 1469.0 26 1834.0 27 2233.0 28 2501.0 29 2979.0 30 3690.0 31 4960.0 32 6653.0 33 9533.0 34 17232.0 35 18904.0 36 20460.0 37 31896.0 38 57562.0 39 64857.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.36911892899129 20.23736214521637 22.538607336793532 11.854911588998808 2 34.4582976783615 23.561471837237384 23.575467246743067 18.40476323765805 3 32.83363056917331 23.240377156292734 26.797210514951097 17.128781759582857 4 28.997288889244327 25.222527011140343 26.279780232083876 19.50040386753145 5 24.59113410801257 30.22088754888397 25.387272974464377 19.800705368639086 6 24.7086955478603 35.26163418398765 25.26331363312833 14.766356635023712 7 77.15189417870938 6.418294799305828 11.125950688174278 5.30386033381051 8 75.63359218176439 6.888140689853728 10.617717388696507 6.860549739685383 9 69.15771626906376 8.818307595108804 13.467982501739428 8.555993634088018 10 37.610463767884134 23.096424372805718 22.47742740381155 16.815684455498598 11 29.63028126774418 25.91270063419199 24.666709319343255 19.79030877872058 12 25.039786949880437 22.88609336137747 30.656744587775208 21.417375100966883 13 24.202461592597626 24.877440199614526 31.786374069305268 19.133724138482577 14 20.473284762597867 28.137570876752427 29.791828280324058 21.597316080325655 15 19.560784062827395 25.43925592405691 35.29122447837109 19.708735534744605 16 20.9355331451284 25.38087507297606 31.46407978183156 22.21951200006398 17 20.57525131756784 25.755952047728346 28.84054030278069 24.82825633192313 18 22.075559216576963 24.895434297550402 31.621628105981237 21.407378379891394 19 22.14153757567518 26.636863108900283 29.02088115098248 22.200718164442062 20 22.60338608936269 27.129901392343314 29.849009524875843 20.417702993418157 21 22.36066570164986 27.411009188986014 29.87380139314305 20.354523716221077 22 19.97144936460841 26.17461472636975 29.1916251469518 24.662310762070042 23 19.997440839404675 27.063123295559055 29.119248886365273 23.820186978670996 24 20.993913996209244 26.091442007021698 29.44634159995522 23.468302396813844 25 19.64075783143129 26.514103374093295 28.83174318823426 25.01339560624115 26 19.903871530138115 27.014739165553696 29.767836149742884 23.3135531545653 27 20.888748490495118 28.146367991298852 28.364696379587496 22.600187138618534 28 18.45754592493662 26.585280028150766 30.268471941203284 24.68870210570933 29 21.578122375860715 26.446125670779985 28.776561287897568 23.199190665461728 30 21.695683815708446 27.048328148367336 27.82767252341232 23.428315512511897 31 21.162658647963468 29.464735566734113 24.951016066730112 24.42158971857231 32 22.136339280715926 30.869874681104598 24.903831543253812 22.089954494925664 33 20.081413296438768 29.178429475132155 25.253716780895868 25.48644044753321 34 19.58597579993762 28.465063459185387 27.235066898057436 24.713893842819555 35 20.475683975655983 29.73984533073152 25.475643988771683 24.308826704840815 36 21.374989003606817 30.442015019073743 25.231324125686776 22.951671851632664 37 19.591973832582912 31.631624827056726 26.468918194832096 22.307483145528266 38 18.702265656864547 31.458081749186267 24.72868899001128 25.110963603937908 39 20.513271646899817 28.842939515838808 26.541294455418623 24.102494381842757 40 20.715605281467678 27.768491934645432 27.73650242720388 23.77940035668301 41 18.494733727337433 30.47880295263154 25.61359873961341 25.412864580417622 42 21.37818795435097 28.64420470085812 26.298973936548816 23.678633408242096 43 21.23943346582321 27.675722363064914 27.089114770355323 23.995729400756552 44 20.382514535232442 26.45452291648339 26.662454714853528 26.500507833430635 45 20.58284882558521 26.348557673083228 26.131828760166663 26.936764741164897 46 21.89041994225894 27.655329052070922 26.41013747490823 24.04411353076191 47 19.160115482121864 27.967626618469144 28.82174646715877 24.05051143225022 48 19.130125318895402 27.668924592733585 27.439399876840397 25.761550211530622 49 20.680016954438944 25.639190345566654 29.781831559248566 23.898961140745836 50 20.202573555873673 24.597931878343903 28.920514071384584 26.278980494397835 51 19.086539615006277 25.147351668652686 26.45212370342528 29.31398501291576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 203.0 2 286.0 3 811.5 4 1337.0 5 910.5 6 484.0 7 488.5 8 493.0 9 489.0 10 485.0 11 514.5 12 544.0 13 546.0 14 548.0 15 558.0 16 568.0 17 582.5 18 597.0 19 600.0 20 603.0 21 662.5 22 722.0 23 789.0 24 856.0 25 999.5 26 1383.0 27 1623.0 28 2128.5 29 2634.0 30 3025.0 31 3416.0 32 3870.0 33 4324.0 34 4775.5 35 5227.0 36 5969.0 37 6711.0 38 7708.5 39 8706.0 40 10281.0 41 11856.0 42 14199.0 43 16542.0 44 21076.5 45 25611.0 46 27882.5 47 30154.0 48 30547.0 49 30940.0 50 26593.5 51 22247.0 52 19640.0 53 17033.0 54 15241.0 55 13449.0 56 11781.5 57 10114.0 58 9518.5 59 8923.0 60 7955.0 61 6987.0 62 6226.0 63 5465.0 64 4461.0 65 3457.0 66 2842.0 67 2227.0 68 1765.0 69 1303.0 70 1168.0 71 1033.0 72 861.5 73 690.0 74 504.5 75 241.5 76 164.0 77 99.0 78 34.0 79 45.5 80 57.0 81 47.5 82 38.0 83 21.5 84 5.0 85 3.5 86 2.0 87 2.0 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 250082.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.98379765193547 #Duplication Level Percentage of deduplicated Percentage of total 1 72.57270036312154 29.743048667367166 2 11.363213610421981 9.31415294570507 3 3.941096530499027 4.845633081981511 4 2.112821340609795 3.463657691929714 5 1.4301689407512677 2.9306877237916416 6 1.0753733435130337 2.6443730106494083 7 0.884484478249636 2.537467301800256 8 0.7305741788683847 2.395336345317663 9 0.6466231100600328 2.3850963629789024 >10 5.158993035524095 34.24372509451919 >50 0.05596737892081259 1.5814626579178495 >100 0.02098776709530472 1.438922123093863 >500 0.004997087403643981 1.3815782297738686 >1k 0.0019988349614575925 1.0948587631738957 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1453 0.5810094289073184 No Hit CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 1220 0.48783998848377735 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 802 0.32069481210163064 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 782 0.31269743524124083 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC 626 0.2503178957302005 No Hit GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 597 0.23872169928263529 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG 566 0.22632576514903113 No Hit TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 412 0.16474596332402971 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCC 327 0.1307571116673731 No Hit ACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 280 0.11196327604545708 No Hit CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 266 0.10636511224318423 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3354899592933518 0.0 2 0.0 0.0 0.0 1.734631041018546 0.0 3 0.0 0.0 0.0 2.23286761942083 0.0 4 0.0 0.0 0.0 2.9410353404083462 0.0 5 0.0 0.0 0.0 4.859206180372838 0.0 6 0.0 0.0 0.0 5.845282747258899 0.0 7 0.0 0.0 0.0 6.880143312993338 0.0 8 0.0 0.0 0.0 8.637566878063994 0.0 9 0.0 0.0 0.0 9.248166601354756 0.0 10 0.0 0.0 0.0 10.883230300461449 0.0 11 0.0 0.0 0.0 12.804999960013117 0.0 12 0.0 0.0 0.0 14.581617229548709 0.0 13 0.0 0.0 0.0 15.298582065082654 0.0 14 0.0 0.0 0.0 15.590086451643861 0.0 15 0.0 0.0 0.0 16.156700602202477 0.0 16 0.0 0.0 0.0 17.239545429099255 0.0 17 0.0 0.0 0.0 18.47234107212834 0.0 18 0.0 0.0 0.0 19.880279268399963 0.0 19 0.0 0.0 0.0 20.69161315088651 0.0 20 0.0 0.0 0.0 21.438568149646915 0.0 21 0.0 0.0 0.0 22.357866619748723 0.0 22 0.0 0.0 0.0 23.266368631089 0.0 23 0.0 0.0 0.0 24.22565398549276 0.0 24 0.0 0.0 0.0 24.957413968218425 0.0 25 0.0 0.0 0.0 25.653185755072336 0.0 26 0.0 0.0 0.0 26.296974592333715 0.0 27 0.0 0.0 0.0 26.923169200502237 0.0 28 0.0 0.0 0.0 27.558560792060206 0.0 29 0.0 0.0 0.0 28.17355907262418 0.0 30 3.998688430194896E-4 0.0 0.0 28.84014043393767 0.0 31 3.998688430194896E-4 0.0 0.0 29.52711510624515 0.0 32 3.998688430194896E-4 0.0 0.0 30.143312993338185 0.0 33 3.998688430194896E-4 0.0 0.0 30.802296846634302 0.0 34 3.998688430194896E-4 0.0 0.0 31.445285946209644 0.0 35 3.998688430194896E-4 0.0 0.0 32.085076095040826 0.0 36 3.998688430194896E-4 0.0 0.0 32.73366335841844 0.0 37 3.998688430194896E-4 0.0 0.0 33.314272918482736 0.0 38 3.998688430194896E-4 0.0 0.0 33.934869362848985 0.0 39 7.997376860389792E-4 0.0 0.0 34.582257019697536 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACTC 20 7.0226885E-4 45.000004 8 CCGATGT 20 7.0226885E-4 45.000004 10 CCGATAG 20 7.0226885E-4 45.000004 11 TGGACCG 20 7.0226885E-4 45.000004 1 GGTCATC 20 7.0226885E-4 45.000004 8 TTGTACG 20 7.0226885E-4 45.000004 1 AGGCGGC 20 7.0226885E-4 45.000004 20 TGACGGA 20 7.0226885E-4 45.000004 18 TATGCGG 40 6.7775545E-9 45.000004 2 TATTGCG 20 7.0226885E-4 45.000004 1 GTTCGTG 20 7.0226885E-4 45.000004 1 CGTAGTT 20 7.0226885E-4 45.000004 26 CGGATAT 20 7.0226885E-4 45.000004 21 TGCGAAG 20 7.0226885E-4 45.000004 1 ACGGATA 20 7.0226885E-4 45.000004 20 GACGGAT 20 7.0226885E-4 45.000004 19 CGGTCCT 20 7.0226885E-4 45.000004 21 TGTACGG 40 6.7775545E-9 45.000004 2 GCGCTAG 20 7.0226885E-4 45.000004 1 TCGAAGG 20 7.0226885E-4 45.000004 2 >>END_MODULE