##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935492.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 551988 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14184547490163 31.0 31.0 33.0 28.0 34.0 2 31.202783393841894 31.0 31.0 34.0 28.0 34.0 3 30.972917889519337 31.0 31.0 34.0 27.0 34.0 4 34.733294926701305 35.0 35.0 37.0 32.0 37.0 5 34.790826974499446 35.0 35.0 37.0 32.0 37.0 6 34.982827525236054 36.0 35.0 37.0 32.0 37.0 7 35.34651659094038 37.0 35.0 37.0 33.0 37.0 8 35.16005963897766 37.0 35.0 37.0 32.0 37.0 9 37.07979340130583 39.0 37.0 39.0 33.0 39.0 10 36.42659079545208 38.0 35.0 39.0 32.0 39.0 11 36.72281462640492 39.0 37.0 39.0 32.0 39.0 12 36.860815814836556 39.0 37.0 39.0 33.0 39.0 13 36.9103042095118 39.0 37.0 39.0 33.0 39.0 14 37.974742204540675 40.0 37.0 41.0 33.0 41.0 15 38.1151673587107 40.0 37.0 41.0 33.0 41.0 16 38.129761878881425 40.0 37.0 41.0 33.0 41.0 17 37.953683775734255 40.0 37.0 41.0 33.0 41.0 18 37.871542497300666 39.0 37.0 41.0 33.0 41.0 19 37.6508655985275 39.0 37.0 41.0 33.0 41.0 20 37.541457422987456 39.0 35.0 41.0 33.0 41.0 21 37.54451546048102 39.0 35.0 41.0 33.0 41.0 22 37.647648137278345 39.0 35.0 41.0 33.0 41.0 23 37.67231896345573 39.0 35.0 41.0 33.0 41.0 24 37.65048153220722 39.0 35.0 41.0 33.0 41.0 25 37.302653318550405 39.0 35.0 41.0 33.0 41.0 26 37.35551316332964 39.0 35.0 41.0 33.0 41.0 27 37.395988680913355 39.0 35.0 41.0 33.0 41.0 28 37.26756559925216 39.0 35.0 41.0 33.0 41.0 29 37.217107980608276 39.0 35.0 41.0 32.0 41.0 30 36.90672079827822 39.0 35.0 41.0 31.0 41.0 31 36.8016931527497 39.0 35.0 41.0 31.0 41.0 32 36.62670746465503 39.0 35.0 41.0 31.0 41.0 33 36.45185946071292 39.0 35.0 41.0 30.0 41.0 34 36.20395733240578 39.0 35.0 41.0 29.0 41.0 35 36.1257889664268 39.0 35.0 41.0 29.0 41.0 36 35.9163460075219 39.0 35.0 41.0 27.0 41.0 37 35.91756523692544 39.0 35.0 41.0 27.0 41.0 38 35.80025471568222 39.0 35.0 41.0 27.0 41.0 39 35.69691551265607 39.0 35.0 41.0 26.0 41.0 40 35.6724548359747 39.0 35.0 41.0 26.0 41.0 41 35.43266701450032 39.0 35.0 41.0 24.0 41.0 42 35.4881138720407 39.0 35.0 41.0 25.0 41.0 43 35.441371913882186 39.0 35.0 41.0 24.0 41.0 44 35.48177496612245 39.0 35.0 41.0 25.0 41.0 45 35.468343514714086 39.0 35.0 41.0 25.0 41.0 46 35.386200424646916 39.0 35.0 40.0 24.0 41.0 47 35.32250157612122 39.0 35.0 40.0 24.0 41.0 48 35.28092639695066 38.0 35.0 40.0 24.0 41.0 49 35.27640999442017 39.0 35.0 40.0 24.0 41.0 50 35.13749936592824 38.0 35.0 40.0 24.0 41.0 51 34.142965064457925 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 15.0 9 23.0 10 29.0 11 24.0 12 24.0 13 25.0 14 32.0 15 32.0 16 67.0 17 149.0 18 208.0 19 435.0 20 910.0 21 1542.0 22 2380.0 23 3408.0 24 4869.0 25 7013.0 26 9018.0 27 9268.0 28 9135.0 29 8974.0 30 9875.0 31 11953.0 32 15006.0 33 20887.0 34 34670.0 35 40073.0 36 42377.0 37 65077.0 38 116667.0 39 137803.0 40 18.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.740059566512315 18.41887867127546 21.61097705022573 17.230084711986493 2 37.4046174916846 24.394370892120843 22.320593925954913 15.880417690239643 3 29.737059501293505 24.55560628129597 30.590520083769935 15.116814133640585 4 25.307977709660356 22.948324963586163 33.727001311622715 18.016696015130766 5 25.46848844540099 27.611288651202564 28.804974021174374 18.115248882222076 6 22.64215888751205 33.89240345804619 29.69213098835482 13.773306666086944 7 72.52929411508946 5.1499307955970055 17.735168155829477 4.585606933484061 8 73.20068552214903 7.105045761864388 14.845974912498097 4.848293803488481 9 67.59404189946159 6.332927527410017 16.62373095067284 9.44929962245556 10 35.56961383218476 25.33696384704015 24.084762712232873 15.008659608542215 11 27.346790147611905 23.80051740255223 31.11516917034428 17.737523279491583 12 23.52587375087864 21.60137539221867 34.373935665268085 20.498815191634602 13 23.489641079153895 21.10444429951376 37.020913498119526 18.385001123212824 14 19.54209149474264 26.06976963267317 34.41904534156539 19.96909353101879 15 18.522141785690994 24.24110669072516 37.70444285020689 19.532308673376956 16 21.706087813503192 24.60216526446227 33.6246440140003 20.067102908034233 17 21.24991847648862 25.726283904722568 33.393660731755034 19.630136887033775 18 21.70445734327558 24.348355399030414 33.40163191953448 20.545555338159524 19 20.777082110480663 26.580650303992115 31.593621600469575 21.048645985057647 20 22.897418059812892 26.401660905671864 32.987854808437866 17.71306622607738 21 21.790691101980478 27.819988840337107 32.98767364507924 17.40164641260317 22 20.860779582164827 23.2881874243643 34.76669782676435 21.084335166706524 23 20.625086052595346 26.135713095212214 33.906171873301595 19.333028978890844 24 20.812046638695044 24.678616201801486 33.15814836554418 21.351188793959288 25 20.28015101777575 27.631216620651173 31.538910266165203 20.549722095407873 26 19.694993369421073 24.615209026283182 33.36087016384414 22.328927440451604 27 21.24756335282651 25.55834547127836 31.90739653760589 21.286694638289237 28 18.31126763625296 27.068523228765844 32.744371254447564 21.875837880533634 29 20.133046370573275 25.60472329108604 31.856851960549864 22.40537837779082 30 20.266382602520345 27.826691884606188 31.280933643485003 20.625991869388464 31 20.991760690449794 27.2895425262868 29.40770451531555 22.310992267947853 32 22.143053834503647 28.714935831938377 29.008782799626076 20.133227533931898 33 20.9620498996355 27.388095393378116 28.743197315883677 22.906657391102705 34 19.69861663659355 27.838467502916732 30.273303042819773 22.18961281766995 35 20.261310028478878 29.22635999333319 29.038131263723127 21.474198714464805 36 19.871446480720596 30.06550867047834 28.957513569135564 21.1055312796655 37 19.80332905787807 30.483814865540555 29.49375711066183 20.21909896591955 38 20.27054935976869 29.022370051522863 28.38938527649152 22.31769531221693 39 21.06676232092002 28.156771524018637 29.100270295731068 21.676195859330274 40 21.96768770335587 25.357435306564636 30.52856221512062 22.146314774958874 41 19.55767154358428 27.57541830619506 30.142140771176184 22.72476937904447 42 21.348471343579934 26.363254273643633 30.708638593592614 21.579635789183822 43 20.627260012898834 25.785524322992533 30.753385943172677 22.833829720935963 44 20.657695457147618 26.00708711058936 29.93507105226925 23.40014637999377 45 20.447364797785458 25.375008152351135 29.61115096705001 24.566476082813395 46 22.365884765610847 26.324122988180903 28.960049856156296 22.349942390051957 47 19.46564055740342 26.309992246208253 32.02189178025609 22.202475416132234 48 19.679594483938057 26.536989934563792 30.820054059146212 22.963361522351935 49 20.995927447698136 24.68169597889809 32.17732994195526 22.14504663144851 50 19.75785705486351 24.71213142314688 31.99272447951767 23.537287042471938 51 19.424516474995833 24.079146648115536 30.73110285006196 25.765234026826672 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 202.0 1 448.0 2 694.0 3 7256.0 4 13818.0 5 8922.0 6 4026.0 7 3949.0 8 3872.0 9 3795.0 10 3718.0 11 3686.0 12 3654.0 13 3496.5 14 3339.0 15 3137.5 16 2936.0 17 2859.0 18 2782.0 19 2745.5 20 2709.0 21 2819.0 22 2929.0 23 3010.0 24 3091.0 25 3503.0 26 4437.5 27 4960.0 28 5835.0 29 6710.0 30 7877.0 31 9044.0 32 9862.0 33 10680.0 34 12628.0 35 14576.0 36 16237.0 37 17898.0 38 19355.5 39 20813.0 40 22715.5 41 24618.0 42 27927.5 43 31237.0 44 44759.5 45 58282.0 46 54326.5 47 50371.0 48 50954.0 49 51537.0 50 46179.5 51 40822.0 52 37233.5 53 33645.0 54 30915.0 55 28185.0 56 25994.5 57 23804.0 58 21909.0 59 20014.0 60 18312.0 61 16610.0 62 14792.0 63 12974.0 64 10959.0 65 8944.0 66 7317.5 67 5691.0 68 4640.0 69 3589.0 70 2844.5 71 2100.0 72 1769.5 73 1439.0 74 1161.0 75 672.0 76 461.0 77 322.0 78 183.0 79 146.5 80 110.0 81 91.5 82 73.0 83 47.5 84 22.0 85 20.0 86 18.0 87 10.0 88 2.0 89 2.0 90 2.0 91 3.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 551988.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.26767144034588 #Duplication Level Percentage of deduplicated Percentage of total 1 72.80387071084628 29.316423453697787 2 8.854364504130654 7.130892813307886 3 4.07797644771749 4.926318472144701 4 2.5753748420022116 4.14817391893911 5 1.9144567828902805 3.85453583600837 6 1.5936155944197377 3.85027134949833 7 1.3254197583327516 3.736009714436012 8 1.1165821494642134 3.5969730504624096 9 0.9588059142800578 3.4747993378160826 >10 4.722257823434816 27.841026895852817 >50 0.033637975903036375 0.9479830294430552 >100 0.015455286224373732 0.99118132923331 >500 0.004545672418933451 1.2388393788090568 >1k 0.0027274034513600706 2.330145581004624 >5k 9.091344837866901E-4 2.616425839346433 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9064 1.6420646825655631 No Hit GAATCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTC 5230 0.9474843656021508 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGC 3884 0.7036384848945991 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCG 3408 0.6174047261896998 No Hit GCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 1638 0.29674558142568314 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCT 1449 0.26250570664579664 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTT 1306 0.23659934636260208 No Hit CGCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTG 1045 0.18931570976180642 No Hit CGTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTC 957 0.17337333420291745 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCT 827 0.1498220975818315 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCT 746 0.1351478655333087 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTC 659 0.11938665333304348 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAACAGTT 649 0.11757501974680609 No Hit CGTCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCT 643 0.11648803959506365 No Hit CTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGCT 609 0.11032848540185657 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCAAACAGTTCGTATGCCGTCTTCTGC 597 0.1081545250983717 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAAACAGTTCGTA 580 0.10507474800176815 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.811633586237382E-4 0.0 0.0 0.1143140792915788 0.0 2 1.811633586237382E-4 0.0 0.0 0.5969332666652174 0.0 3 1.811633586237382E-4 0.0 0.0 0.9598034739885649 0.0 4 1.811633586237382E-4 0.0 0.0 1.5985854764958658 0.0 5 1.811633586237382E-4 0.0 0.0 3.427973071878374 0.0 6 1.811633586237382E-4 0.0 0.0 4.652456212816221 0.0 7 1.811633586237382E-4 0.0 0.0 5.649760502039899 0.0 8 1.811633586237382E-4 0.0 0.0 6.995985419972898 0.0 9 1.811633586237382E-4 0.0 0.0 7.682232222439619 0.0 10 3.623267172474764E-4 0.0 0.0 9.249838764610825 0.0 11 3.623267172474764E-4 0.0 0.0 10.258737508786423 0.0 12 3.623267172474764E-4 0.0 0.0 11.801343507467553 3.623267172474764E-4 13 3.623267172474764E-4 0.0 0.0 12.294107842924122 3.623267172474764E-4 14 3.623267172474764E-4 0.0 0.0 12.556070059494047 3.623267172474764E-4 15 3.623267172474764E-4 0.0 0.0 12.921657717196751 3.623267172474764E-4 16 3.623267172474764E-4 0.0 0.0 13.368587722921513 3.623267172474764E-4 17 3.623267172474764E-4 0.0 0.0 13.87439582019899 3.623267172474764E-4 18 3.623267172474764E-4 0.0 0.0 14.414624955614977 3.623267172474764E-4 19 3.623267172474764E-4 0.0 0.0 14.901954390312833 3.623267172474764E-4 20 3.623267172474764E-4 0.0 0.0 15.262469473974072 3.623267172474764E-4 21 3.623267172474764E-4 0.0 0.0 15.679688688884541 3.623267172474764E-4 22 3.623267172474764E-4 0.0 0.0 16.15596715870635 3.623267172474764E-4 23 3.623267172474764E-4 0.0 0.0 16.578802437734154 3.623267172474764E-4 24 3.623267172474764E-4 0.0 0.0 16.951998956499054 3.623267172474764E-4 25 3.623267172474764E-4 0.0 0.0 17.298926788263515 3.623267172474764E-4 26 3.623267172474764E-4 0.0 0.0 17.636434125379537 3.623267172474764E-4 27 3.623267172474764E-4 0.0 0.0 17.998760842627014 3.623267172474764E-4 28 3.623267172474764E-4 0.0 0.0 18.34460169423973 3.623267172474764E-4 29 5.434900758712146E-4 0.0 0.0 18.712725638963168 3.623267172474764E-4 30 5.434900758712146E-4 0.0 0.0 19.1563947042327 3.623267172474764E-4 31 5.434900758712146E-4 0.0 0.0 19.551149662673826 3.623267172474764E-4 32 5.434900758712146E-4 0.0 0.0 19.945723457756326 3.623267172474764E-4 33 5.434900758712146E-4 0.0 0.0 20.323630223845445 3.623267172474764E-4 34 5.434900758712146E-4 0.0 0.0 20.71874750900382 3.623267172474764E-4 35 5.434900758712146E-4 0.0 0.0 21.125096922396864 3.623267172474764E-4 36 5.434900758712146E-4 0.0 0.0 21.50626462894121 3.623267172474764E-4 37 5.434900758712146E-4 0.0 0.0 21.903918201120316 3.623267172474764E-4 38 7.246534344949528E-4 0.0 0.0 22.36226149843837 3.623267172474764E-4 39 7.246534344949528E-4 0.0 0.0 22.885642441502352 3.623267172474764E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACC 20 7.0300983E-4 45.0 33 TGGACGA 20 7.0300983E-4 45.0 5 GTTTACG 20 7.0300983E-4 45.0 1 CACTCGT 20 7.0300983E-4 45.0 38 TCGTGCG 35 1.2103919E-7 45.0 1 CGGATTG 20 7.0300983E-4 45.0 2 GCGATAC 25 3.8881622E-5 45.0 9 ATCGAAT 55 1.8189894E-12 45.0 43 CCCCTCG 30 2.1634442E-6 44.999996 40 CGTTTTT 4030 0.0 43.492558 1 GGCGAAC 115 0.0 43.043476 32 CCGATGA 585 0.0 41.923073 18 CGATGAA 615 0.0 40.609756 19 CGGCGAA 150 0.0 40.5 31 TACGGGT 50 1.0786607E-9 40.5 4 GCGTAAG 50 1.0786607E-9 40.5 1 CCGATCG 45 1.9252184E-8 40.0 40 GCGCGAC 45 1.9252184E-8 40.0 9 CGCGACC 45 1.9252184E-8 40.0 10 GGCGCGA 45 1.9252184E-8 40.0 8 >>END_MODULE