SRR2935491.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935491.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	211024
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC	5065	2.4002009250132685	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC	4886	2.31537645007203	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG	3913	1.854291455000379	No Hit
GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	2331	1.104613693229206	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTT	1080	0.5117901281370839	No Hit
GAACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT	981	0.46487603305785125	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCT	954	0.4520812798544241	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT	887	0.4203313367199939	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTA	836	0.396163469557965	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	831	0.39379407081658957	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTC	773	0.36630904541663506	No Hit
CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	729	0.34545833649253166	No Hit
CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT	638	0.3023352793994996	No Hit
TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	394	0.18670862082038062	No Hit
ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC	262	0.12415649404807036	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCC	252	0.11941769656531957	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATG	237	0.11230950034119341	No Hit
GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCTACGCATCGT	224	0.10614906361361741	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGACCT	20	7.0201844E-4	45.000004	11
GTCTGCG	20	7.0201844E-4	45.000004	1
ACTGACG	20	7.0201844E-4	45.000004	43
TTAGCGG	20	7.0201844E-4	45.000004	2
GCGCGAC	20	7.0201844E-4	45.000004	9
CGGTTGG	20	7.0201844E-4	45.000004	2
CGACCTC	20	7.0201844E-4	45.000004	12
ACGGGTG	20	7.0201844E-4	45.000004	5
TGGCCGG	20	7.0201844E-4	45.000004	2
AGTTGCG	20	7.0201844E-4	45.000004	1
TAGGGCG	20	7.0201844E-4	45.000004	5
TAGGCTA	20	7.0201844E-4	45.000004	24
TAAGCAA	20	7.0201844E-4	45.000004	19
ACGAGAG	20	7.0201844E-4	45.000004	3
AAGTGCG	20	7.0201844E-4	45.000004	1
AGAGCGG	20	7.0201844E-4	45.000004	2
TTGGGCA	20	7.0201844E-4	45.000004	5
GGCTAAC	20	7.0201844E-4	45.000004	9
CGCGGGA	70	0.0	45.0	4
TCGGGAC	25	3.8799506E-5	45.0	5