##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935491.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 211024 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.980675183865344 31.0 30.0 33.0 28.0 34.0 2 30.95470657365987 31.0 30.0 33.0 28.0 34.0 3 30.80955246796573 31.0 30.0 34.0 27.0 34.0 4 34.69451342027447 35.0 35.0 37.0 32.0 37.0 5 34.66191049359315 35.0 35.0 37.0 32.0 37.0 6 34.844742778072636 35.0 35.0 37.0 32.0 37.0 7 35.210838577602544 36.0 35.0 37.0 33.0 37.0 8 34.820195807111986 37.0 35.0 37.0 32.0 37.0 9 36.5476106983092 39.0 35.0 39.0 32.0 39.0 10 36.03540355599363 37.0 35.0 39.0 32.0 39.0 11 36.45130411706725 38.0 35.0 39.0 32.0 39.0 12 36.569845136098266 38.0 35.0 39.0 32.0 39.0 13 36.46442584729699 39.0 35.0 39.0 32.0 39.0 14 37.47122128288726 39.0 36.0 40.0 32.0 41.0 15 37.58383880506483 39.0 36.0 41.0 32.0 41.0 16 37.71753449844567 39.0 36.0 41.0 33.0 41.0 17 37.49663545378725 39.0 36.0 40.0 32.0 41.0 18 37.54408977177951 39.0 36.0 40.0 33.0 41.0 19 37.466169724770644 39.0 36.0 40.0 32.0 41.0 20 37.28932728030935 39.0 35.0 40.0 32.0 41.0 21 37.419464136780654 39.0 36.0 40.0 32.0 41.0 22 37.54118015012511 39.0 36.0 41.0 32.0 41.0 23 37.50387159754341 39.0 36.0 41.0 32.0 41.0 24 37.49335620592918 39.0 35.0 41.0 32.0 41.0 25 37.22348642808401 39.0 35.0 40.0 32.0 41.0 26 37.20209075744939 39.0 35.0 41.0 32.0 41.0 27 37.18228258397149 39.0 35.0 41.0 32.0 41.0 28 37.05738209871863 39.0 35.0 41.0 31.0 41.0 29 37.0477196906513 39.0 35.0 41.0 31.0 41.0 30 36.853286829934035 39.0 35.0 41.0 31.0 41.0 31 36.90078379710365 39.0 35.0 41.0 31.0 41.0 32 36.78700053074532 39.0 35.0 41.0 31.0 41.0 33 36.794729509439684 39.0 35.0 41.0 31.0 41.0 34 36.700882364091285 39.0 35.0 41.0 31.0 41.0 35 36.71793729623171 39.0 35.0 41.0 31.0 41.0 36 36.547549093941925 39.0 35.0 41.0 30.0 41.0 37 36.58385776025476 39.0 35.0 41.0 30.0 41.0 38 36.42022234437789 39.0 35.0 41.0 30.0 41.0 39 36.27449010539085 39.0 35.0 41.0 30.0 41.0 40 36.33577223443779 39.0 35.0 41.0 30.0 41.0 41 36.009719273637124 39.0 35.0 40.0 28.0 41.0 42 36.20141784820684 39.0 35.0 41.0 30.0 41.0 43 36.18786014860869 39.0 35.0 40.0 30.0 41.0 44 36.27541890969748 39.0 35.0 41.0 30.0 41.0 45 36.25170596709379 39.0 35.0 40.0 30.0 41.0 46 36.136794866934565 39.0 35.0 40.0 29.0 41.0 47 35.90591591477747 39.0 35.0 40.0 28.0 41.0 48 35.941603798620065 39.0 35.0 40.0 29.0 41.0 49 35.98038137842141 39.0 35.0 40.0 29.0 41.0 50 35.84570949275912 39.0 35.0 40.0 28.0 41.0 51 34.62951133520358 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 11.0 10 13.0 11 13.0 12 1.0 13 7.0 14 5.0 15 7.0 16 20.0 17 37.0 18 75.0 19 152.0 20 326.0 21 654.0 22 1167.0 23 1543.0 24 1761.0 25 1984.0 26 2140.0 27 2118.0 28 2365.0 29 2830.0 30 3769.0 31 4947.0 32 6537.0 33 9084.0 34 14290.0 35 16774.0 36 17665.0 37 26426.0 38 46106.0 39 48188.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.50822655243006 18.76469027219653 22.323053301994086 10.404029873379331 2 28.253658351656686 33.10334369550383 22.970846917886117 15.672151034953371 3 28.470221396618395 32.203446053529454 25.21277200697551 14.113560542876641 4 25.851561907650318 21.884714534839638 35.24338463871408 17.020338918795964 5 30.796497080900753 26.109826370460233 24.043710667980893 19.049965880658124 6 21.339278944575025 37.83124194404428 26.057699598149973 14.771779513230724 7 69.69539009780878 5.351050117522178 19.858878610963682 5.094681173705361 8 68.49363105618318 12.939760406399273 11.572617332625674 6.993991204791872 9 62.9677193115475 6.866517552505876 13.336397755705512 16.82936538024111 10 37.772954735006444 25.09477594965502 21.47433467283342 15.657934642505117 11 30.203673515808628 22.491754492380014 27.506823868375164 19.797748123436197 12 24.541758283417998 18.751895518993102 32.44844188338767 24.257904314201227 13 24.24605732049435 23.579782394419592 35.840473121540676 16.33368716354538 14 18.66517552505876 31.55754795663053 28.504814618242474 21.272461900068237 15 15.100652058533626 23.945617560087953 39.49977253772083 21.45395784365759 16 17.265334748654183 25.31702555159603 29.841629388126467 27.57601031162332 17 17.671449692925922 26.552903935097426 30.22073318674653 25.554913185230117 18 18.50358253089696 24.10578891500493 31.721036469785428 25.669592084312686 19 18.817764804003335 26.23066570627038 28.11338994616726 26.838179543559026 20 21.43689817271969 25.838293274698614 33.42226476609296 19.30254378648874 21 19.859826370460233 30.95619455606945 30.923496853438472 18.260482220031847 22 17.080995526575176 23.010178936992947 33.00998938509364 26.898836151338234 23 18.558078701948595 28.131397376601715 30.470941693835773 22.83958222761392 24 20.744085980741527 25.62362574873 29.243119266055047 24.389169004473423 25 16.961103950261585 33.57817120327546 26.288479035559938 23.172245810903025 26 15.94273637121844 24.893850936386382 31.21256349988627 27.950849192508908 27 21.732599135643337 25.807964970809007 27.307320494351355 25.1521153991963 28 14.681268481310184 26.23066570627038 34.446318902115394 24.64174691030404 29 17.429771021305633 23.070361665023885 30.38327394040488 29.116593373265598 30 17.48000227462279 26.670899992417922 28.920407157479715 26.928690575479564 31 21.4842861475472 23.659394192129803 27.494029115171735 27.362290545151264 32 21.161100159223594 30.01459549624687 24.062665857911895 24.761638486617635 33 20.05932974448404 24.41096747289408 24.41096747289408 31.118735309727803 34 22.132553643187507 22.53345591022822 27.14714913943438 28.186841307149894 35 18.7424179240276 23.41060732428539 24.170710440518615 33.676264311168396 36 18.914436272651454 26.8196982333763 26.820172113124574 27.445693380847676 37 17.64206914853287 26.0325839714914 30.00606566077792 26.319281219197816 38 16.170672530138752 26.105561452725755 27.249981044810067 30.473784972325426 39 22.16762074455986 27.302581696868604 26.193703085904918 24.336094472666616 40 20.284896504662978 21.417942982788688 27.593069982561225 30.70409052998711 41 19.947494123891122 25.55823034346804 24.599097732959287 29.895177799681555 42 18.051975130790808 23.256122526347713 29.597581317764803 29.09432102509667 43 20.493877473652287 25.52695428008189 26.65668359996967 27.322484646296157 44 19.252786412919857 22.58558268253848 29.908920312381532 28.252710592160135 45 18.824873000227463 21.471965274092046 26.85429145500038 32.848870270680116 46 25.215141405716885 25.171070589127304 25.598036242323147 24.015751762832664 47 16.58057851239669 22.823470316172568 34.68420653574949 25.91174463568125 48 19.021059216013345 24.522329213738722 27.812950185760858 28.643661384487075 49 18.713037379634546 20.414739555690346 34.98227689741451 25.889946167260597 50 20.903783455910226 21.0298354689514 30.353419516263553 27.71296155887482 51 18.329668663280003 20.38109409356282 27.28030934869967 34.0089278944575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 108.0 1 176.0 2 244.0 3 726.0 4 1208.0 5 794.0 6 380.0 7 387.0 8 394.0 9 402.0 10 410.0 11 413.0 12 416.0 13 410.0 14 404.0 15 376.0 16 348.0 17 355.0 18 362.0 19 351.5 20 341.0 21 402.0 22 463.0 23 516.5 24 570.0 25 860.5 26 1205.0 27 1259.0 28 1614.5 29 1970.0 30 2416.0 31 2862.0 32 3414.0 33 3966.0 34 4551.0 35 5136.0 36 5502.0 37 5868.0 38 6433.5 39 6999.0 40 7782.0 41 8565.0 42 9570.0 43 10575.0 44 11743.5 45 12912.0 46 13867.5 47 14823.0 48 26334.0 49 37845.0 50 31265.0 51 24685.0 52 23764.5 53 22844.0 54 18657.5 55 14471.0 56 12081.0 57 9691.0 58 8272.0 59 6853.0 60 5674.0 61 4495.0 62 3739.5 63 2984.0 64 2519.5 65 2055.0 66 1734.5 67 1414.0 68 1131.0 69 848.0 70 662.0 71 476.0 72 384.0 73 292.0 74 219.0 75 127.0 76 108.0 77 78.5 78 49.0 79 37.5 80 26.0 81 14.5 82 3.0 83 3.0 84 3.0 85 1.5 86 0.0 87 1.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 211024.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.79926453863068 #Duplication Level Percentage of deduplicated Percentage of total 1 75.3042173695616 29.97052467965729 2 10.512466363441526 8.367768595041323 3 3.722048912914057 4.444044279323679 4 1.8205415188245662 2.8982485404503753 5 1.2287762246088634 2.445219501099401 6 0.9382516133641321 2.2405034498445673 7 0.7263115281118282 2.023466525134582 8 0.6501083513918987 2.0699067404655396 9 0.5941466434882003 2.128193949503374 >10 4.404305479484676 28.755970884828265 >50 0.060724406448693834 1.647679884752445 >100 0.022622818088729076 1.6808514671317005 >500 0.00952539708999119 3.1413488513154904 >1k 0.004762698544995595 5.786071726438699 >5k 0.0011906746362488987 2.4002009250132685 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 5065 2.4002009250132685 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGC 4886 2.31537645007203 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCG 3913 1.854291455000379 No Hit GCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 2331 1.104613693229206 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTT 1080 0.5117901281370839 No Hit GAACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT 981 0.46487603305785125 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCT 954 0.4520812798544241 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTACGCAT 887 0.4203313367199939 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTACGCATCGTA 836 0.396163469557965 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 831 0.39379407081658957 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTC 773 0.36630904541663506 No Hit CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 729 0.34545833649253166 No Hit CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT 638 0.3023352793994996 No Hit TCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 394 0.18670862082038062 No Hit ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 262 0.12415649404807036 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCC 252 0.11941769656531957 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATG 237 0.11230950034119341 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCTACGCATCGT 224 0.10614906361361741 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.738797482750777E-4 0.0 0.0 0.31607779209947684 0.0 2 4.738797482750777E-4 0.0 0.0 2.1514140571688527 0.0 3 4.738797482750777E-4 0.0 0.0 2.665099704299037 0.0 4 4.738797482750777E-4 0.0 0.0 3.7834559102282204 0.0 5 4.738797482750777E-4 0.0 0.0 7.8341799984835845 0.0 6 4.738797482750777E-4 0.0 0.0 9.251080445826068 0.0 7 4.738797482750777E-4 0.0 0.0 10.61111532337554 0.0 8 4.738797482750777E-4 0.0 0.0 12.434604594738039 0.0 9 4.738797482750777E-4 0.0 0.0 12.919383577223444 0.0 10 4.738797482750777E-4 0.0 0.0 15.974960194101145 0.0 11 4.738797482750777E-4 0.0 0.0 17.78518083251194 0.0 12 4.738797482750777E-4 0.0 0.0 21.731177496398512 0.0 13 4.738797482750777E-4 0.0 0.0 22.543407384941997 0.0 14 4.738797482750777E-4 0.0 0.0 22.918720145575858 0.0 15 4.738797482750777E-4 0.0 0.0 23.818143907801957 0.0 16 4.738797482750777E-4 0.0 0.0 24.85641443627265 0.0 17 4.738797482750777E-4 0.0 0.0 26.113617408446434 0.0 18 4.738797482750777E-4 0.0 0.0 27.442376222609752 0.0 19 4.738797482750777E-4 0.0 0.0 28.645556903480173 0.0 20 4.738797482750777E-4 0.0 0.0 29.39191750701342 0.0 21 4.738797482750777E-4 0.0 0.0 30.23352793994996 0.0 22 4.738797482750777E-4 0.0 0.0 31.165649404807038 0.0 23 4.738797482750777E-4 0.0 0.0 32.025741147926304 0.0 24 4.738797482750777E-4 0.0 0.0 32.683012358783834 0.0 25 4.738797482750777E-4 0.0 0.0 33.27157100614148 0.0 26 4.738797482750777E-4 0.0 0.0 33.918416862536965 0.0 27 4.738797482750777E-4 0.0 0.0 34.623076048222 0.0 28 4.738797482750777E-4 0.0 0.0 35.2391197209796 0.0 29 4.738797482750777E-4 0.0 0.0 35.81014481765107 0.0 30 4.738797482750777E-4 0.0 0.0 36.47547198422928 0.0 31 9.477594965501554E-4 0.0 0.0 37.05597467586625 0.0 32 9.477594965501554E-4 0.0 0.0 37.63079081052392 0.0 33 9.477594965501554E-4 0.0 0.0 38.20371142618849 0.0 34 0.0014216392448252332 0.0 0.0 38.77426264311168 0.0 35 0.0014216392448252332 0.0 0.0 39.394097353855486 0.0 36 0.0014216392448252332 0.0 0.0 39.9584881340511 0.0 37 0.0018955189931003109 0.0 0.0 40.491602850860566 0.0 38 0.0018955189931003109 0.0 0.0 41.05741527030101 0.0 39 0.0018955189931003109 0.0 0.0 41.68009325953446 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGACCT 20 7.0201844E-4 45.000004 11 GTCTGCG 20 7.0201844E-4 45.000004 1 ACTGACG 20 7.0201844E-4 45.000004 43 TTAGCGG 20 7.0201844E-4 45.000004 2 GCGCGAC 20 7.0201844E-4 45.000004 9 CGGTTGG 20 7.0201844E-4 45.000004 2 CGACCTC 20 7.0201844E-4 45.000004 12 ACGGGTG 20 7.0201844E-4 45.000004 5 TGGCCGG 20 7.0201844E-4 45.000004 2 AGTTGCG 20 7.0201844E-4 45.000004 1 TAGGGCG 20 7.0201844E-4 45.000004 5 TAGGCTA 20 7.0201844E-4 45.000004 24 TAAGCAA 20 7.0201844E-4 45.000004 19 ACGAGAG 20 7.0201844E-4 45.000004 3 AAGTGCG 20 7.0201844E-4 45.000004 1 AGAGCGG 20 7.0201844E-4 45.000004 2 TTGGGCA 20 7.0201844E-4 45.000004 5 GGCTAAC 20 7.0201844E-4 45.000004 9 CGCGGGA 70 0.0 45.0 4 TCGGGAC 25 3.8799506E-5 45.0 5 >>END_MODULE