##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935485.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 231980 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.07617467023019 31.0 30.0 33.0 28.0 34.0 2 31.06845417708423 31.0 31.0 34.0 28.0 34.0 3 30.89497801534615 31.0 30.0 34.0 27.0 34.0 4 34.75430209500819 35.0 35.0 37.0 32.0 37.0 5 34.75077161824295 35.0 35.0 37.0 32.0 37.0 6 34.92762738167083 36.0 35.0 37.0 32.0 37.0 7 35.36369945684973 37.0 35.0 37.0 33.0 37.0 8 34.99477110095698 37.0 35.0 37.0 32.0 37.0 9 36.76408311061299 39.0 37.0 39.0 32.0 39.0 10 36.189943098542976 37.0 35.0 39.0 32.0 39.0 11 36.55727217863609 38.0 35.0 39.0 32.0 39.0 12 36.6873954651263 39.0 35.0 39.0 33.0 39.0 13 36.656332442451934 39.0 35.0 39.0 33.0 39.0 14 37.622971807914475 39.0 36.0 41.0 33.0 41.0 15 37.82513147685145 39.0 37.0 41.0 33.0 41.0 16 37.7999051642383 39.0 36.0 41.0 33.0 41.0 17 37.73849900853522 39.0 36.0 41.0 33.0 41.0 18 37.760026726441936 39.0 36.0 41.0 33.0 41.0 19 37.62597206655746 39.0 36.0 40.0 33.0 41.0 20 37.705000431071646 39.0 36.0 41.0 33.0 41.0 21 37.69072333821881 39.0 36.0 41.0 33.0 41.0 22 37.82664453832227 39.0 36.0 41.0 33.0 41.0 23 37.883636520389686 40.0 36.0 41.0 34.0 41.0 24 37.85746616087594 40.0 36.0 41.0 33.0 41.0 25 37.46969135270282 39.0 36.0 41.0 33.0 41.0 26 37.5631821708768 39.0 36.0 41.0 33.0 41.0 27 37.55739287869644 39.0 36.0 41.0 33.0 41.0 28 37.47879127510992 39.0 36.0 41.0 33.0 41.0 29 37.44250797482542 39.0 36.0 41.0 33.0 41.0 30 37.20131045779809 39.0 35.0 41.0 32.0 41.0 31 37.23642124321062 39.0 35.0 41.0 32.0 41.0 32 37.240025002155356 39.0 35.0 41.0 32.0 41.0 33 37.23707647210966 39.0 35.0 41.0 32.0 41.0 34 37.21061298387792 40.0 35.0 41.0 32.0 41.0 35 37.2462324338305 40.0 35.0 41.0 32.0 41.0 36 37.10699198206742 40.0 35.0 41.0 32.0 41.0 37 37.09492628674886 40.0 35.0 41.0 32.0 41.0 38 36.927347185102164 39.0 35.0 41.0 31.0 41.0 39 36.85337098025692 39.0 35.0 41.0 31.0 41.0 40 36.7234890938874 39.0 35.0 41.0 31.0 41.0 41 36.58129149064575 39.0 35.0 41.0 30.0 41.0 42 36.66949737046297 39.0 35.0 41.0 31.0 41.0 43 36.61871713078714 39.0 35.0 41.0 31.0 41.0 44 36.60990602638159 39.0 35.0 41.0 31.0 41.0 45 36.583671006121214 39.0 35.0 41.0 31.0 41.0 46 36.45520734546081 39.0 35.0 40.0 31.0 41.0 47 36.41769118027416 39.0 35.0 40.0 31.0 41.0 48 36.416497111819986 39.0 35.0 40.0 31.0 41.0 49 36.39750409518062 39.0 35.0 40.0 31.0 41.0 50 36.26129838779205 39.0 35.0 40.0 30.0 41.0 51 35.06389774980602 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 17.0 11 7.0 12 7.0 13 8.0 14 12.0 15 6.0 16 19.0 17 33.0 18 71.0 19 105.0 20 252.0 21 458.0 22 688.0 23 905.0 24 1213.0 25 1413.0 26 1773.0 27 2101.0 28 2449.0 29 2975.0 30 3858.0 31 5039.0 32 6646.0 33 9467.0 34 16677.0 35 18378.0 36 19362.0 37 29100.0 38 51805.0 39 57118.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.24010690576774 20.30735408224847 22.932580394861628 11.519958617122166 2 32.965341839813775 25.663850331925165 23.796447969652558 17.574359858608503 3 31.955340977670488 25.01379429261143 26.579015432364862 16.45184929735322 4 29.317613587378222 24.415897922234674 27.38943012328649 18.877058367100613 5 26.56004828002414 28.776187602379515 24.650831968273128 20.012932149323216 6 24.054228812828693 35.70092249331839 24.886197085955686 15.358651607897233 7 74.49564617639452 6.5992757996378995 13.18906802310544 5.716010000862144 8 72.51788947323044 8.556772135528925 11.38115354771963 7.544184843520993 9 65.92982153633933 9.076644538322268 14.190016380722476 10.803517544615914 10 37.222174325372876 24.578843003707217 22.327786878179154 15.871195792740753 11 30.195275454780585 24.953444262436417 25.196137598068795 19.6551426847142 12 27.03983101991551 20.37158375722045 31.547116130700925 21.04146909216312 13 24.240020691438918 24.39779291318217 32.03638244676265 19.32580394861626 14 19.215449607724803 29.89136994568497 28.68307612725235 22.210104319337873 15 17.510992326924736 25.659108543839988 36.91180274161566 19.91809638761962 16 19.425812570049143 24.629278386067767 32.24200362100181 23.702905422881283 17 19.218898180877662 25.273730494008106 29.569359427536856 25.93801189757738 18 20.82334684024485 25.41425984998707 31.03974480558669 22.722648504181393 19 21.63979653418398 27.035520303474435 27.827398913699458 23.497284248642124 20 23.36882489869816 26.078110181912233 30.02543322700233 20.527631692387274 21 21.940253470126734 28.916716958358478 28.914130528493835 20.228899043020952 22 19.132252780412102 25.994913354599536 28.503319251659626 26.369514613328736 23 19.622812311406157 27.43253728769722 29.255108198982672 23.68954220191396 24 21.401844986636778 24.66031554444349 29.43055435813432 24.50728511078541 25 18.63307181653591 28.436503146823 27.30623329597379 25.6241917406673 26 18.017501508750755 26.34494352961462 29.280541425984996 26.357013535649624 27 21.23545133201138 27.685145271144062 27.440296577291146 23.639106819553408 28 17.078196396241054 27.71833778774032 29.043020950081903 26.160444865936718 29 19.143029571514784 24.86507457539443 28.198120527631694 27.79377532545909 30 19.812914906457454 28.210621605310806 28.249418053280458 23.72704543495129 31 19.844814208121388 25.62548495559962 26.430726786791965 28.098974049487026 32 20.952237261832916 26.146650573325285 26.126390206052246 26.77472195878955 33 19.936632468316233 24.9344771100957 28.118372273471852 27.01051814811622 34 17.976980774204673 22.493749461160444 31.4863350288818 28.042934735753082 35 17.684714199499957 23.987412707992068 29.82282955427192 28.505043538236052 36 19.039572376929044 25.452194154668504 28.474437451504443 27.03379601689801 37 18.2701094921976 25.991464781446677 30.669885334942666 25.068540391413052 38 17.943357185964306 24.86722993361497 28.6860936287611 28.503319251659626 39 20.549616346236746 21.81524269333563 30.434520217260108 27.200620743167512 40 20.374170187085095 21.464350375032332 34.130959565479785 24.030519872402795 41 16.747995516854903 24.19562031209587 30.47288559358565 28.583498577463573 42 18.875765152168288 23.006724717648073 30.53797741184585 27.57953271833779 43 20.396585912578672 23.58134321924304 28.085179756875593 27.936891111302696 44 19.593499439606862 22.91016466936805 28.8943012328649 28.602034658160186 45 18.844727993792567 22.529097335977237 28.336494525390123 30.28968014484007 46 21.194930597465298 24.373652901112163 29.444348650745756 24.987067850676784 47 17.316579015432364 23.056729028364515 33.89559444779722 25.7310975084059 48 18.42270885421157 22.04931459608587 30.701784636606604 28.826191913095954 49 18.757220450038798 20.817742908871452 33.6563496853177 26.768686955772047 50 18.663677903267523 20.69919820674196 32.30019829295629 28.33692559703423 51 17.521769118027418 21.02551944133115 29.534011552720063 31.91869988792137 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 146.0 1 250.5 2 355.0 3 758.0 4 1161.0 5 791.0 6 421.0 7 397.5 8 374.0 9 383.5 10 393.0 11 397.5 12 402.0 13 451.5 14 501.0 15 454.0 16 407.0 17 443.5 18 480.0 19 485.5 20 491.0 21 535.5 22 580.0 23 666.5 24 753.0 25 1077.5 26 1534.0 27 1666.0 28 2134.5 29 2603.0 30 3060.5 31 3518.0 32 4046.5 33 4575.0 34 5246.0 35 5917.0 36 6011.0 37 6105.0 38 6788.5 39 7472.0 40 8686.0 41 9900.0 42 11466.0 43 13032.0 44 14552.0 45 16072.0 46 21682.0 47 27292.0 48 27093.5 49 26895.0 50 26412.5 51 25930.0 52 21633.0 53 17336.0 54 14802.5 55 12269.0 56 11030.5 57 9792.0 58 9174.5 59 8557.0 60 8471.0 61 8385.0 62 7391.0 63 6397.0 64 5180.5 65 3964.0 66 3097.0 67 2230.0 68 2014.0 69 1798.0 70 1395.5 71 993.0 72 813.5 73 634.0 74 529.5 75 314.5 76 204.0 77 137.0 78 70.0 79 48.5 80 27.0 81 34.0 82 41.0 83 25.5 84 10.0 85 6.0 86 2.0 87 2.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 231980.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.79144753858091 #Duplication Level Percentage of deduplicated Percentage of total 1 74.63541446506319 30.444865936718685 2 10.385932282199771 8.473144236572118 3 3.690239675360359 4.515906543667557 4 1.91486663566809 3.1244072764893525 5 1.2607262121148075 2.57134235709975 6 0.9827957898296488 2.4053797741184586 7 0.7883501711966859 2.251056125528063 8 0.7038085978780065 2.2967497198034312 9 0.619267024559327 2.2734718510216396 >10 4.913978949148244 33.49469781877748 >50 0.06763325865494357 1.9527545478058455 >100 0.029589550661537813 2.371756185878093 >500 0.0021135393329669867 0.6043624450383654 >1k 0.005283848332417466 3.2201051814811623 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 1783 0.7686007414432279 TruSeq Adapter, Index 27 (96% over 25bp) GAATCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTC 1688 0.7276489352530391 TruSeq Adapter, Index 27 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGC 1549 0.6677299767221312 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCG 1432 0.6172945943615828 No Hit CCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 1018 0.43883093370118115 TruSeq Adapter, Index 27 (96% over 25bp) CTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGCT 723 0.31166479868954217 TruSeq Adapter, Index 27 (100% over 25bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 679 0.29269764634882317 No Hit TCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 422 0.18191223381325977 TruSeq Adapter, Index 27 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCT 357 0.15389257694628847 No Hit ACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTGC 333 0.14354685748771445 TruSeq Adapter, Index 27 (100% over 24bp) CGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCTG 310 0.13363220967324768 TruSeq Adapter, Index 27 (100% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTT 290 0.12501077679110267 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCACCTTTCT 283 0.12199327528235192 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTC 278 0.11983791706181568 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 277 0.11940684541770841 No Hit GAACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCCGTCTTCT 273 0.11768255884127943 TruSeq Adapter, Index 27 (100% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACCTTTCTCGTA 269 0.1159582722648504 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACCTTTCTCGTATGCC 263 0.11337184240020691 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.310716441072506E-4 0.0 0.0 0.32804552116561775 0.0 2 4.310716441072506E-4 0.0 0.0 1.9510302612294164 0.0 3 4.310716441072506E-4 0.0 0.0 2.5653073540822486 0.0 4 4.310716441072506E-4 0.0 0.0 3.459349943960686 0.0 5 4.310716441072506E-4 0.0 0.0 6.1117337701525996 0.0 6 4.310716441072506E-4 0.0 0.0 7.336408311061298 0.0 7 4.310716441072506E-4 0.0 0.0 8.629192171738943 0.0 8 4.310716441072506E-4 0.0 0.0 10.563410638848177 0.0 9 4.310716441072506E-4 0.0 0.0 11.235020260367273 0.0 10 4.310716441072506E-4 0.0 0.0 13.315372014828865 0.0 11 8.621432882145012E-4 0.0 0.0 15.23665833261488 0.0 12 8.621432882145012E-4 0.0 0.0 17.45840158634365 0.0 13 8.621432882145012E-4 0.0 0.0 18.208897318734373 0.0 14 8.621432882145012E-4 0.0 0.0 18.55590999224071 0.0 15 8.621432882145012E-4 0.0 0.0 19.229243900336236 0.0 16 8.621432882145012E-4 0.0 0.0 20.31985515992758 0.0 17 8.621432882145012E-4 0.0 0.0 21.604448659367186 0.0 18 8.621432882145012E-4 0.0 0.0 22.995085783257178 0.0 19 8.621432882145012E-4 0.0 0.0 23.85550478489525 0.0 20 8.621432882145012E-4 0.0 0.0 24.598241227692043 0.0 21 8.621432882145012E-4 0.0 0.0 25.461677730838865 0.0 22 8.621432882145012E-4 0.0 0.0 26.3794292611432 0.0 23 8.621432882145012E-4 0.0 0.0 27.27217863608932 0.0 24 8.621432882145012E-4 0.0 0.0 28.00586257435986 0.0 25 8.621432882145012E-4 0.0 0.0 28.636520389688766 0.0 26 8.621432882145012E-4 0.0 0.0 29.24734890938874 0.0 27 8.621432882145012E-4 0.0 0.0 29.857746357444608 0.0 28 8.621432882145012E-4 0.0 0.0 30.456935942753685 0.0 29 8.621432882145012E-4 0.0 0.0 31.011725148719716 0.0 30 8.621432882145012E-4 0.0 0.0 31.653590826795412 0.0 31 8.621432882145012E-4 0.0 0.0 32.25709112854556 0.0 32 8.621432882145012E-4 0.0 0.0 32.86921286317786 0.0 33 8.621432882145012E-4 0.0 0.0 33.45719458574015 0.0 34 8.621432882145012E-4 0.0 0.0 34.033106302267434 0.0 35 8.621432882145012E-4 0.0 0.0 34.627554099491334 0.0 36 0.001293214932321752 0.0 0.0 35.218553323562375 0.0 37 0.001293214932321752 0.0 0.0 35.76170359513751 0.0 38 0.001293214932321752 0.0 0.0 36.302698508492114 0.0 39 0.001293214932321752 0.0 0.0 36.95663419260281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTTTAG 30 2.1579872E-6 45.000004 1 GCGAACC 30 2.1579872E-6 45.000004 33 GCGCGAC 30 2.1579872E-6 45.000004 9 CGCGACC 30 2.1579872E-6 45.000004 10 AGGGCGT 30 2.1579872E-6 45.000004 6 CGGGTCC 25 3.8811508E-5 45.0 6 AGGTACG 25 3.8811508E-5 45.0 1 GGTAACT 20 7.0216344E-4 45.0 8 GTTTACG 20 7.0216344E-4 45.0 1 GGGTACT 20 7.0216344E-4 45.0 7 GTTAGCG 20 7.0216344E-4 45.0 1 TACGGGA 55 1.8189894E-12 45.0 4 AACGGGA 35 1.2063356E-7 45.0 4 GGGCGTA 20 7.0216344E-4 45.0 7 TACGAGG 20 7.0216344E-4 45.0 2 TAGGGCG 45 3.8198777E-10 45.0 5 GCGGCTA 20 7.0216344E-4 45.0 24 CGCAAGG 35 1.2063356E-7 45.0 2 CGCCGCA 20 7.0216344E-4 45.0 18 TCAAGTA 20 7.0216344E-4 45.0 24 >>END_MODULE