##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935483.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 346839 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.219398625875407 31.0 31.0 33.0 28.0 34.0 2 31.21495275906112 31.0 31.0 34.0 28.0 34.0 3 31.02857521789649 31.0 31.0 34.0 27.0 34.0 4 34.85690478867717 35.0 35.0 37.0 32.0 37.0 5 34.90554983724437 35.0 35.0 37.0 33.0 37.0 6 35.0861235328207 37.0 35.0 37.0 32.0 37.0 7 35.48820634357728 37.0 35.0 37.0 33.0 37.0 8 35.25518756541219 37.0 35.0 37.0 32.0 37.0 9 37.03829730797286 39.0 37.0 39.0 33.0 39.0 10 36.47813250528343 38.0 35.0 39.0 32.0 39.0 11 36.75685548626308 39.0 37.0 39.0 33.0 39.0 12 36.80817324464665 39.0 35.0 39.0 33.0 39.0 13 36.82564244505376 39.0 36.0 39.0 33.0 39.0 14 37.721816174075 40.0 37.0 41.0 33.0 41.0 15 37.945205123991244 40.0 37.0 41.0 33.0 41.0 16 37.89413531926917 39.0 37.0 41.0 33.0 41.0 17 37.87822592038381 39.0 37.0 41.0 33.0 41.0 18 37.863259322048556 39.0 37.0 41.0 33.0 41.0 19 37.74104411556947 39.0 36.0 41.0 33.0 41.0 20 37.87929269776467 39.0 36.0 41.0 33.0 41.0 21 37.78972952868622 39.0 36.0 41.0 33.0 41.0 22 37.93491216385701 40.0 36.0 41.0 34.0 41.0 23 38.02986976666407 40.0 36.0 41.0 34.0 41.0 24 38.02309140552245 40.0 36.0 41.0 34.0 41.0 25 37.60787281707074 39.0 36.0 41.0 33.0 41.0 26 37.7143516155911 39.0 36.0 41.0 33.0 41.0 27 37.74087689100707 40.0 36.0 41.0 33.0 41.0 28 37.61141624788446 40.0 36.0 41.0 33.0 41.0 29 37.54127131031977 40.0 36.0 41.0 33.0 41.0 30 37.29260261965926 39.0 35.0 41.0 32.0 41.0 31 37.22630096384778 39.0 35.0 41.0 32.0 41.0 32 37.26539114690101 39.0 35.0 41.0 33.0 41.0 33 37.28041252569636 39.0 35.0 41.0 33.0 41.0 34 37.106400952603366 39.0 35.0 41.0 32.0 41.0 35 37.13579211103711 39.0 35.0 41.0 32.0 41.0 36 36.965975567914796 39.0 35.0 41.0 31.0 41.0 37 36.924342418240165 39.0 35.0 41.0 31.0 41.0 38 36.7572216503911 39.0 35.0 41.0 31.0 41.0 39 36.697156317484485 39.0 35.0 41.0 31.0 41.0 40 36.578648883199406 39.0 35.0 41.0 31.0 41.0 41 36.39976473233979 39.0 35.0 40.0 30.0 41.0 42 36.45509588022108 39.0 35.0 40.0 30.0 41.0 43 36.416556384950944 39.0 35.0 40.0 31.0 41.0 44 36.38781105930994 39.0 35.0 40.0 31.0 41.0 45 36.371547029024995 39.0 35.0 40.0 31.0 41.0 46 36.274398207814 38.0 35.0 40.0 30.0 41.0 47 36.271013352016354 38.0 35.0 40.0 31.0 41.0 48 36.19490311066518 38.0 35.0 40.0 31.0 41.0 49 36.13796603034837 38.0 35.0 40.0 30.0 41.0 50 36.00202687702363 38.0 35.0 40.0 30.0 41.0 51 34.75172630528862 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 12.0 9 15.0 10 17.0 11 10.0 12 12.0 13 17.0 14 15.0 15 13.0 16 29.0 17 53.0 18 104.0 19 184.0 20 315.0 21 550.0 22 772.0 23 1102.0 24 1570.0 25 2069.0 26 2708.0 27 3315.0 28 3842.0 29 4525.0 30 5641.0 31 7399.0 32 9900.0 33 14477.0 34 24887.0 35 26416.0 36 29727.0 37 45978.0 38 78390.0 39 82760.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.79997347472458 21.033101813809864 23.00894651408867 13.157978197376883 2 33.434533025409486 23.227491718059387 24.571342899731576 18.766632356799555 3 33.586476722629236 23.04671619973532 26.740072483198258 16.62673459443719 4 29.260261965926553 25.221212147422868 25.3042477922033 20.21427809444728 5 24.967780439915927 30.02488186161302 24.945868255876647 20.0614694425944 6 24.63938599753776 33.73813210163794 25.482428446627974 16.140053454196327 7 76.87457292864988 6.170009716323712 10.80328336778736 6.152133987239036 8 76.90859447755298 5.398758501783249 11.082663714288184 6.609983306375581 9 69.96272045531212 7.79352956270777 14.498081242305508 7.745668739674604 10 39.16255092420403 24.27754664267859 20.872796888469868 15.687105544647517 11 29.66361914317594 25.088585770343013 24.903197160642257 20.34459792583879 12 26.759966439760234 20.814556609839148 31.068017149167193 21.357459801233425 13 25.83907807368837 23.14186120937957 31.48406032770248 19.535000389229584 14 20.41119943258976 25.88492066924423 31.95690219381327 21.74697770435274 15 19.266287816537357 24.56528821729967 35.787497945732746 20.38092602043023 16 22.801934038559676 25.13702322979826 30.454764314278382 21.606278417363676 17 23.203849624753847 24.026133162648954 27.867973324799117 24.902043887798083 18 24.81497178806305 23.504565518871868 30.792673257620972 20.88778943544411 19 24.46437684343456 25.85407062066261 27.556013020450408 22.125539515452413 20 24.40959638333636 25.97112781434614 28.37426010339091 21.245015698926593 21 23.766358454499063 26.710087389249765 29.93953967114425 19.584014485106923 22 22.58973183523191 24.02959298118147 29.468139396088677 23.912535787497944 23 20.93968671343188 26.436761725180848 29.261415238770727 23.362136322616543 24 21.874990990055903 25.293291700183655 29.183281003578028 23.648436306182408 25 21.497582451800405 26.687598568788403 26.73949584677617 25.075323132635024 26 20.675587232116342 25.879154305023366 28.12198166872814 25.32327679413215 27 22.311504761575254 24.959419211795677 29.311294289281193 23.417781737347877 28 19.65378749217937 25.53922713420348 29.95885699128414 24.848128382333012 29 21.159673508457814 26.632529790479154 29.334071427953607 22.873725273109425 30 25.599773958522544 23.92118533382924 28.7669495068317 21.712091200816516 31 24.45630393352535 25.40804234817884 28.447204610784834 21.688449107510976 32 25.027173991390818 26.36929526379675 28.059416616931777 20.544114127880658 33 26.796871170773763 23.161755165941546 27.545345246641812 22.49602841664288 34 21.853943760649756 23.838438007259853 32.614844351413765 21.692773880676626 35 24.08293185022446 24.801997468566107 29.33839620111925 21.776674480090186 36 27.857305550990517 25.51817990479733 27.05606924250156 19.56844530171059 37 23.345990502798127 25.73326529023553 29.980192538901335 20.940551668065012 38 24.308685009471255 25.61130668696427 28.161192945430013 21.918815358134466 39 25.326736612664664 22.071047373565257 29.520324992287488 23.08189102148259 40 26.88048345197628 21.44712676486785 30.762976481883523 20.909413301272348 41 23.698891993114962 23.254593629897446 27.774269906210087 25.272244470777505 42 24.762209555442148 22.795302719705685 29.240368009364577 23.20211971548759 43 24.864562520362472 22.342643128367918 29.93665648903382 22.85613786223579 44 23.464200969325827 22.37839458653727 29.659582688221338 24.49782175591557 45 23.883127329971543 22.11688996912112 28.688238635216916 25.311744065690423 46 24.36404210599154 23.23037490016982 29.067377082738677 23.338205911099962 47 22.054613235535797 23.50110570033935 31.41832377558464 23.025957288540216 48 22.926775823941366 23.301012861875396 30.126081553689176 23.646129760494063 49 25.49482612970283 21.910742448225257 30.49714709130173 22.097284330770183 50 22.618563656336224 22.228757435005868 30.875132265979317 24.27754664267859 51 22.599246336196334 21.4514515380335 28.425292426745553 27.52400969902462 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 161.0 1 358.0 2 555.0 3 1398.0 4 2241.0 5 1444.0 6 647.0 7 631.0 8 615.0 9 652.0 10 689.0 11 721.5 12 754.0 13 715.0 14 676.0 15 664.0 16 652.0 17 674.0 18 696.0 19 657.5 20 619.0 21 777.0 22 935.0 23 1042.0 24 1149.0 25 1408.0 26 2033.5 27 2400.0 28 2947.5 29 3495.0 30 4217.0 31 4939.0 32 5481.0 33 6023.0 34 6934.0 35 7845.0 36 8341.0 37 8837.0 38 9743.5 39 10650.0 40 12006.5 41 13363.0 42 15180.5 43 16998.0 44 19047.5 45 21097.0 46 25767.0 47 30437.0 48 34516.0 49 38595.0 50 38999.5 51 39404.0 52 33899.5 53 28395.0 54 24931.0 55 21467.0 56 19996.5 57 18526.0 58 17107.5 59 15689.0 60 14705.0 61 13721.0 62 12111.5 63 10502.0 64 9302.0 65 8102.0 66 6803.0 67 5504.0 68 4438.5 69 3373.0 70 2911.0 71 2449.0 72 1885.0 73 1321.0 74 1068.5 75 641.0 76 466.0 77 344.0 78 222.0 79 169.5 80 117.0 81 69.0 82 21.0 83 12.0 84 3.0 85 2.0 86 1.0 87 2.5 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 346839.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.18696299542227 #Duplication Level Percentage of deduplicated Percentage of total 1 73.71023150234403 30.35900577271053 2 10.263038024620009 8.45406734681272 3 3.7813559112005497 4.672276979614149 4 2.030379455196833 3.3450065395143045 5 1.4677324203069297 3.0225720441181543 6 1.1137380046980052 2.752289159165531 7 0.9128070603621203 2.6317025431966385 8 0.8064472962757536 2.6572091959574244 9 0.7251939556235326 2.6881682953293304 >10 5.086902590972817 33.01742323218136 >50 0.05919032679693066 1.633082543051155 >100 0.03875557111703794 2.8462129908837177 >500 0.001409293495165016 0.31373062538444974 >1k 0.002818586990330032 1.6072527320805572 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1512 0.4359371350972642 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1510 0.4353604986751778 No Hit CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1496 0.43132404372057354 No Hit CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCT 1020 0.2940845752640274 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTG 555 0.1600166071289561 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 526 0.15165537900870432 No Hit TCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 444 0.1280132857031649 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 430 0.12397683074856058 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCC 408 0.11763383010561096 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 370 0.10667773808597071 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.766364220863283E-4 0.0 0.0 0.3024458033842792 0.0 2 5.766364220863283E-4 0.0 0.0 1.4447625555372954 0.0 3 5.766364220863283E-4 0.0 0.0 1.960852153304559 0.0 4 5.766364220863283E-4 0.0 0.0 2.587655944112398 0.0 5 5.766364220863283E-4 0.0 0.0 4.280083842935771 0.0 6 5.766364220863283E-4 0.0 0.0 5.347726178428608 0.0 7 5.766364220863283E-4 0.0 0.0 6.3865366928171285 0.0 8 5.766364220863283E-4 0.0 0.0 8.048114543058883 0.0 9 5.766364220863283E-4 0.0 0.0 8.694235654006613 0.0 10 5.766364220863283E-4 0.0 0.0 10.033185426091068 0.0 11 5.766364220863283E-4 0.0 0.0 11.818163470659297 0.0 12 5.766364220863283E-4 0.0 0.0 13.329815851158607 0.0 13 5.766364220863283E-4 0.0 0.0 14.069640380695366 0.0 14 5.766364220863283E-4 0.0 0.0 14.390538549586408 0.0 15 5.766364220863283E-4 0.0 0.0 14.91095292051932 0.0 16 5.766364220863283E-4 0.0 0.0 15.825498285948235 0.0 17 5.766364220863283E-4 0.0 0.0 16.90582662272697 0.0 18 5.766364220863283E-4 0.0 0.0 18.080723332727864 0.0 19 5.766364220863283E-4 0.0 0.0 18.76749731143268 0.0 20 5.766364220863283E-4 0.0 0.0 19.469552155322788 0.0 21 5.766364220863283E-4 0.0 0.0 20.31115301335778 0.0 22 5.766364220863283E-4 0.0 0.0 21.1328599148308 0.0 23 5.766364220863283E-4 0.0 0.0 21.946782224605652 0.0 24 5.766364220863283E-4 0.0 0.0 22.60068792725155 0.0 25 5.766364220863283E-4 0.0 0.0 23.285731996690107 0.0 26 5.766364220863283E-4 0.0 0.0 23.845645962535933 0.0 27 5.766364220863283E-4 0.0 0.0 24.508489529724166 0.0 28 5.766364220863283E-4 0.0 0.0 25.05283431217366 0.0 29 5.766364220863283E-4 0.0 0.0 25.646481508711535 0.0 30 5.766364220863283E-4 0.0 0.0 26.40418176733297 0.0 31 5.766364220863283E-4 0.0 0.0 26.98254809868556 0.0 32 5.766364220863283E-4 0.0 0.0 27.58052006838908 0.0 33 5.766364220863283E-4 0.0 0.0 28.17820371988156 0.0 34 5.766364220863283E-4 0.0 0.0 28.822018285140945 0.0 35 5.766364220863283E-4 0.0 0.0 29.474482396731624 0.0 36 5.766364220863283E-4 0.0 0.0 30.02978327120076 0.0 37 5.766364220863283E-4 0.0 0.0 30.619682330995072 0.0 38 5.766364220863283E-4 0.0 0.0 31.266956714786975 0.0 39 5.766364220863283E-4 0.0 0.0 32.15872494154348 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCTCGG 20 7.026466E-4 45.000004 2 TACCCCG 20 7.026466E-4 45.000004 29 CCGATTA 20 7.026466E-4 45.000004 11 TATGCGG 40 6.7921064E-9 45.000004 2 CAGTCTA 20 7.026466E-4 45.000004 27 CCTCTCA 20 7.026466E-4 45.000004 25 CACGACG 25 3.885154E-5 45.0 26 TTCGGCC 35 1.2086457E-7 45.0 12 AGGGCCG 25 3.885154E-5 45.0 6 CGGTCTA 30 2.161103E-6 44.999996 31 CGCCGCA 30 2.161103E-6 44.999996 18 CGTTTTT 695 0.0 42.08633 1 GTGCACG 65 0.0 41.53846 1 TGCATTA 185 0.0 41.351353 15 TGCGGGT 60 3.6379788E-12 41.249996 4 TATGGGC 105 0.0 40.714287 4 CTACGAA 50 1.0768417E-9 40.5 11 TACGAAT 50 1.0768417E-9 40.5 12 CGAATAT 50 1.0768417E-9 40.5 14 GCTACGA 50 1.0768417E-9 40.5 10 >>END_MODULE