##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935482.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 496635 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16109416372185 31.0 31.0 33.0 28.0 34.0 2 31.167253616841343 31.0 31.0 34.0 28.0 34.0 3 30.961482779103367 31.0 30.0 34.0 27.0 34.0 4 34.825630493219364 35.0 35.0 37.0 32.0 37.0 5 34.793172047882244 35.0 35.0 37.0 32.0 37.0 6 34.972953980287336 36.0 35.0 37.0 32.0 37.0 7 35.360961269342674 37.0 35.0 37.0 33.0 37.0 8 35.03740171353207 37.0 35.0 37.0 32.0 37.0 9 36.78599172430457 39.0 37.0 39.0 32.0 39.0 10 36.24085696739054 37.0 35.0 39.0 32.0 39.0 11 36.59278745960313 38.0 35.0 39.0 32.0 39.0 12 36.665410210718136 39.0 35.0 39.0 33.0 39.0 13 36.62148861840184 39.0 35.0 39.0 32.0 39.0 14 37.58860128665922 39.0 36.0 41.0 32.0 41.0 15 37.73365348797407 40.0 37.0 41.0 33.0 41.0 16 37.84424778761062 39.0 37.0 41.0 33.0 41.0 17 37.66480815890946 39.0 36.0 41.0 33.0 41.0 18 37.671491135340844 39.0 36.0 41.0 33.0 41.0 19 37.58073836922488 39.0 36.0 40.0 33.0 41.0 20 37.458048667532495 39.0 36.0 41.0 32.0 41.0 21 37.545273691946804 39.0 36.0 41.0 33.0 41.0 22 37.67036354666908 39.0 36.0 41.0 33.0 41.0 23 37.677652602011534 40.0 36.0 41.0 33.0 41.0 24 37.70340994895648 40.0 36.0 41.0 33.0 41.0 25 37.37852144935415 39.0 35.0 41.0 32.0 41.0 26 37.39990939019602 39.0 35.0 41.0 33.0 41.0 27 37.391971971367305 39.0 35.0 41.0 33.0 41.0 28 37.2386762914414 39.0 35.0 41.0 32.0 41.0 29 37.232675908866675 39.0 35.0 41.0 32.0 41.0 30 36.99516143646743 39.0 35.0 41.0 31.0 41.0 31 37.02703997905907 39.0 35.0 41.0 31.0 41.0 32 36.930174071501206 39.0 35.0 41.0 31.0 41.0 33 36.89217634681406 39.0 35.0 41.0 31.0 41.0 34 36.707489403686814 39.0 35.0 41.0 31.0 41.0 35 36.69077290162796 39.0 35.0 41.0 31.0 41.0 36 36.59987515982563 39.0 35.0 41.0 31.0 41.0 37 36.596967591893446 39.0 35.0 41.0 31.0 41.0 38 36.45452495293324 39.0 35.0 41.0 30.0 41.0 39 36.289117762541906 39.0 35.0 41.0 30.0 41.0 40 36.22257392249841 39.0 35.0 41.0 30.0 41.0 41 35.968185891046744 39.0 35.0 40.0 28.0 41.0 42 36.04807353488981 39.0 35.0 41.0 29.0 41.0 43 36.100778237538634 39.0 35.0 41.0 30.0 41.0 44 36.20053359106789 39.0 35.0 41.0 30.0 41.0 45 36.21832935656971 39.0 35.0 40.0 30.0 41.0 46 36.104358331571476 39.0 35.0 40.0 30.0 41.0 47 35.968624845208254 38.0 35.0 40.0 30.0 41.0 48 35.91929284081871 38.0 35.0 40.0 29.0 41.0 49 35.91399720116383 38.0 35.0 40.0 29.0 41.0 50 35.781292095804766 38.0 35.0 40.0 29.0 41.0 51 34.6146103275041 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 15.0 9 20.0 10 30.0 11 21.0 12 23.0 13 16.0 14 18.0 15 47.0 16 44.0 17 83.0 18 169.0 19 371.0 20 818.0 21 1526.0 22 2421.0 23 3038.0 24 3792.0 25 4472.0 26 4864.0 27 5309.0 28 5519.0 29 6701.0 30 8264.0 31 10924.0 32 14776.0 33 21129.0 34 34984.0 35 36802.0 36 41081.0 37 62028.0 38 106456.0 39 120861.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.14695903430085 19.419090478923152 20.45788154278293 10.976068943993074 2 33.10056681466268 29.091586376312584 21.641446937892013 16.16639987113272 3 30.058896372587512 29.394827186968296 24.983337863823532 15.562938576620658 4 26.882116645020993 22.408811300049333 32.13768663102681 18.571385423902868 5 28.64518207536722 27.245763991663896 24.027907819626083 20.081146113342797 6 22.919447884261075 37.16592668660083 25.533037341306997 14.381588087831105 7 73.17124246176769 5.635124387125353 16.425342555397826 4.768290595709122 8 72.45180061816022 10.342605736607368 11.384215772146545 5.821377873085868 9 66.07850836127136 6.972726449001781 13.374007067564712 13.57475812216215 10 40.30485165161537 21.219003896221572 22.169601417540044 16.306543034623015 11 31.87854259164175 23.860581714941556 24.892526704722783 19.36834898869391 12 25.37759118869995 19.43056772076072 31.379383249267573 23.81245784127176 13 26.57343924612643 21.121346663042274 34.505421486604845 17.799792604226443 14 21.139065913598518 28.004067373423137 30.53953104392562 20.317335669052724 15 18.83999315392592 23.488880163500358 36.45252549659207 21.218601185981655 16 22.13476698178743 24.683922800447007 28.47221802732389 24.709092190441673 17 22.092885116836307 26.072467707672637 28.805259395733284 23.02938777975777 18 22.797426681566947 23.558549035005587 30.091113191780682 23.552911091646784 19 21.758434262587212 26.099650648866874 27.684315442930924 24.457599645614987 20 23.140535805974206 26.701903812659193 30.506307449132663 19.651252932233934 21 22.372567378457013 28.43335648917213 30.676452525496593 18.517623606874263 22 20.381970662559024 22.612179971206217 32.640671720680174 24.36517764555458 23 21.240548894057003 26.218047459401774 30.517381980730313 22.02402166581091 24 22.061071007883054 25.861648897077334 28.299052624160602 23.778227470879017 25 20.778841603994884 29.812437705759763 27.1617989066417 22.24692178360365 26 19.338951141180143 24.026498333786385 30.940227732640675 25.694322792392803 27 22.996768250324685 24.708890835321714 29.107292075669257 23.187048838684348 28 18.668035881482375 25.533037341306997 31.936532866189456 23.862393911021172 29 20.606682976431383 23.46471754910548 32.71295820874485 23.215641265718283 30 20.986237377550918 25.053409445568676 32.75745769025542 21.202895486624985 31 22.580768572492875 23.052342263432905 30.353277557965104 24.013611606109116 32 23.80279279551381 25.593846587534102 27.634782083421428 22.96857853353066 33 22.648423892798533 22.58298347881241 27.52443947768482 27.244153150704243 34 23.047711095673883 22.829844855880072 30.35911685644387 23.763327192002173 35 20.936704018041418 26.38758847040583 29.094405347991987 23.581302163560764 36 21.061544192414953 27.969434292790478 30.23910920494931 20.729912309845258 37 20.02617616559445 25.16053036938597 31.751084800708767 23.062208664310813 38 19.567489202331693 25.777281101815213 27.759823612914918 26.895406082938173 39 22.778096590051046 24.03998912682352 26.988834858598366 26.193079424527067 40 22.66312281655542 23.595195666837817 28.855598175722612 24.88608334088415 41 20.75226272816052 26.678546618744146 27.46161668025814 25.107573972837194 42 19.85482295851078 25.96373594289569 31.398511985663514 22.78292911293002 43 21.093559656488164 24.999043563180205 29.353952097616965 24.55344468271467 44 21.384920515066398 22.579560441773133 30.289045274698722 25.746473768461748 45 20.480433316218146 21.652521469489667 28.543095029548866 29.323950184743325 46 23.983811048355435 24.435249227299728 27.766065621633594 23.814874102711247 47 19.23042073152315 24.121336595286277 33.546971115608045 23.101271557582532 48 20.141149939090074 25.687476718314254 29.013460589769146 25.157912752826523 49 21.154972968075146 22.194166742174836 33.08969363818498 23.56116665156503 50 20.65037703746212 22.46136498635819 31.495967863722857 25.392290112456834 51 20.59037321171484 22.245310942643997 28.58034572674097 28.583970118900197 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 357.0 2 559.0 3 2353.0 4 4147.0 5 2653.5 6 1160.0 7 1100.5 8 1041.0 9 1041.0 10 1041.0 11 1047.0 12 1053.0 13 1057.0 14 1061.0 15 1039.0 16 1017.0 17 1069.0 18 1121.0 19 1080.0 20 1039.0 21 1191.0 22 1343.0 23 1544.0 24 1745.0 25 2094.0 26 2719.5 27 2996.0 28 3595.5 29 4195.0 30 5132.5 31 6070.0 32 7599.0 33 9128.0 34 10247.0 35 11366.0 36 12146.0 37 12926.0 38 14907.5 39 16889.0 40 18648.5 41 20408.0 42 24273.5 43 28139.0 44 46954.5 45 65770.0 46 57606.0 47 49442.0 48 50385.0 49 51328.0 50 44947.5 51 38567.0 52 35523.0 53 32479.0 54 30348.5 55 28218.0 56 25688.0 57 23158.0 58 21962.5 59 20767.0 60 18363.0 61 15959.0 62 14627.5 63 13296.0 64 11241.5 65 9187.0 66 7692.0 67 6197.0 68 5340.5 69 4484.0 70 3613.5 71 2743.0 72 2283.0 73 1823.0 74 1436.5 75 837.5 76 625.0 77 435.0 78 245.0 79 189.5 80 134.0 81 96.5 82 59.0 83 53.5 84 48.0 85 28.5 86 9.0 87 5.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 496635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.69927419602407 #Duplication Level Percentage of deduplicated Percentage of total 1 73.65073972011221 27.76579431448511 2 9.84895144506234 7.425966421414653 3 3.674876026180449 4.156204768421162 4 2.13002046783879 3.212009026407921 5 1.4721699002580906 2.774986836648158 6 1.1374362714509099 2.572831312675867 7 0.9644323114166558 2.5450878706121243 8 0.8418589066534942 2.5389975805036085 9 0.7113862573231619 2.4136871016698294 >10 5.473137135381677 33.22602939460267 >50 0.05775054966182068 1.5016257096485865 >100 0.029145137212506913 1.9425502235792398 >500 0.0026986238159728624 0.8208073323471932 >1k 0.0037780733423620075 2.754404773917688 >5k 0.0016191742895837174 4.349017333066164 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 8600 1.7316540316328892 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGC 6845 1.3782757961078056 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCG 5929 1.1938345062269071 No Hit GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 2945 0.592990828274286 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2796 0.5629889154006463 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTT 2258 0.45465986086361215 No Hit GAACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCT 1913 0.3851923444783392 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCT 1354 0.27263483242220143 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTTCCGAAT 1180 0.237599041549629 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTC 1091 0.21967843587342817 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTTCCGAATCGTA 961 0.1935022702789775 No Hit CCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 908 0.18283044892123995 No Hit CTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGCT 800 0.16108409596585016 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 723 0.1455797517291371 No Hit CGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTG 642 0.12926998701259476 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.013551199573127E-4 0.0 0.0 0.1677288149244415 0.0 2 2.013551199573127E-4 0.0 0.0 1.1034260573660737 0.0 3 2.013551199573127E-4 0.0 0.0 1.4723086371278706 0.0 4 2.013551199573127E-4 0.0 0.0 2.2739033696779325 0.0 5 2.013551199573127E-4 0.0 0.0 5.151469388987889 0.0 6 2.013551199573127E-4 0.0 0.0 6.434302858235927 0.0 7 2.013551199573127E-4 0.0 0.0 7.395974911152053 0.0 8 2.013551199573127E-4 0.0 0.0 8.674378567761032 0.0 9 2.013551199573127E-4 0.0 0.0 9.083129461274376 0.0 10 2.013551199573127E-4 0.0 0.0 11.226353358100013 0.0 11 2.013551199573127E-4 0.0 0.0 12.53334944174293 0.0 12 2.013551199573127E-4 0.0 0.0 14.998137465140395 0.0 13 2.013551199573127E-4 0.0 0.0 15.599383853332931 0.0 14 2.013551199573127E-4 0.0 0.0 15.885509478792272 0.0 15 2.013551199573127E-4 0.0 0.0 16.437021152355353 0.0 16 2.013551199573127E-4 0.0 0.0 17.195727244354504 0.0 17 2.013551199573127E-4 0.0 0.0 18.00839650850222 0.0 18 2.013551199573127E-4 0.0 0.0 18.92476365942795 0.0 19 2.013551199573127E-4 0.0 0.0 19.714277084780573 0.0 20 2.013551199573127E-4 0.0 0.0 20.32297361241153 0.0 21 2.013551199573127E-4 0.0 0.0 20.97697504203288 0.0 22 2.013551199573127E-4 0.0 0.0 21.70910225819767 0.0 23 2.013551199573127E-4 0.0 0.0 22.366124014618382 0.0 24 2.013551199573127E-4 0.0 0.0 22.90132592346492 0.0 25 2.013551199573127E-4 0.0 0.0 23.405720498957987 0.0 26 2.013551199573127E-4 0.0 0.0 23.929646521086916 0.0 27 2.013551199573127E-4 0.0 0.0 24.495253053047005 0.0 28 2.013551199573127E-4 0.0 0.0 24.975686369265155 0.0 29 2.013551199573127E-4 0.0 0.0 25.509680147391947 0.0 30 2.013551199573127E-4 0.0 0.0 26.17717237005044 0.0 31 2.013551199573127E-4 0.0 0.0 26.72485829633433 0.0 32 2.013551199573127E-4 0.0 0.0 27.24093146878492 0.0 33 2.013551199573127E-4 0.0 0.0 27.745527399397947 0.0 34 2.013551199573127E-4 0.0 0.0 28.318785425916417 0.0 35 2.013551199573127E-4 0.0 0.0 28.897480040673734 0.0 36 2.013551199573127E-4 0.0 0.0 29.411539661924753 0.0 37 2.013551199573127E-4 0.0 0.0 29.911907135018676 0.0 38 2.013551199573127E-4 0.0 0.0 30.50107221601377 0.0 39 4.027102399146254E-4 0.0 0.0 31.326024142478882 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTACG 50 2.1827873E-11 45.0 1 CAATCGT 20 7.029412E-4 45.0 41 CAATCGA 40 6.8012014E-9 45.0 41 AGTACGG 75 0.0 45.0 2 CCAATCG 60 0.0 44.999996 40 GCGGGTT 60 0.0 44.999996 5 CCGATGA 875 0.0 42.428574 18 GATGAAT 935 0.0 41.14973 20 CGTTTTT 1285 0.0 41.14786 1 CGATGAA 910 0.0 41.043957 19 ACGGGAC 50 1.0786607E-9 40.5 5 ATACGAA 50 1.0786607E-9 40.5 19 GATTACG 45 1.9244908E-8 40.0 1 ATGAATG 970 0.0 39.896908 21 TGCGTAG 40 3.452933E-7 39.375 1 TACGGCT 940 0.0 38.776596 7 GTTGGCG 35 6.2411236E-6 38.57143 1 GTAACGG 35 6.2411236E-6 38.57143 2 ACGACGG 35 6.2411236E-6 38.57143 2 CCACCGA 1160 0.0 38.405174 15 >>END_MODULE