##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935481.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 465028 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.239286666609324 31.0 31.0 33.0 28.0 34.0 2 31.267932253541723 31.0 31.0 34.0 28.0 34.0 3 31.042543674789474 31.0 31.0 34.0 27.0 34.0 4 34.82422348761795 35.0 35.0 37.0 32.0 37.0 5 34.88160067780865 35.0 35.0 37.0 33.0 37.0 6 35.06477674462613 37.0 35.0 37.0 32.0 37.0 7 35.475745546504726 37.0 35.0 37.0 33.0 37.0 8 35.26227022888944 37.0 35.0 37.0 32.0 37.0 9 37.17961714133342 39.0 37.0 39.0 34.0 39.0 10 36.45818316316437 38.0 35.0 39.0 32.0 39.0 11 36.778897184685654 39.0 37.0 39.0 33.0 39.0 12 36.897711535649464 39.0 37.0 39.0 33.0 39.0 13 36.98821791376003 39.0 37.0 39.0 33.0 39.0 14 38.05422039103022 40.0 37.0 41.0 33.0 41.0 15 38.22686590914956 40.0 37.0 41.0 34.0 41.0 16 38.15913235332066 40.0 37.0 41.0 34.0 41.0 17 38.07327515762492 40.0 37.0 41.0 33.0 41.0 18 37.99290795392965 39.0 37.0 41.0 34.0 41.0 19 37.819636667039404 39.0 37.0 41.0 33.0 41.0 20 37.87397533051773 39.0 36.0 41.0 34.0 41.0 21 37.79657999088227 39.0 36.0 41.0 33.0 41.0 22 37.918174819580756 40.0 36.0 41.0 34.0 41.0 23 37.97657130323336 40.0 36.0 41.0 34.0 41.0 24 37.95105456015552 40.0 36.0 41.0 34.0 41.0 25 37.535651616676844 39.0 35.0 41.0 33.0 41.0 26 37.626499909682856 39.0 35.0 41.0 33.0 41.0 27 37.70466939625141 40.0 36.0 41.0 33.0 41.0 28 37.626076279277804 40.0 35.0 41.0 33.0 41.0 29 37.58639479773261 40.0 35.0 41.0 33.0 41.0 30 37.28136155242265 39.0 35.0 41.0 33.0 41.0 31 37.24630559880265 39.0 35.0 41.0 33.0 41.0 32 37.15602501354757 39.0 35.0 41.0 32.0 41.0 33 37.064916521155716 40.0 35.0 41.0 32.0 41.0 34 36.902053209699204 40.0 35.0 41.0 31.0 41.0 35 36.85487325494379 40.0 35.0 41.0 31.0 41.0 36 36.693966814901465 40.0 35.0 41.0 31.0 41.0 37 36.71365810230782 40.0 35.0 41.0 31.0 41.0 38 36.55051953860843 39.0 35.0 41.0 31.0 41.0 39 36.47108991286546 39.0 35.0 41.0 30.0 41.0 40 36.38242428412913 39.0 35.0 41.0 30.0 41.0 41 36.23896625579535 39.0 35.0 41.0 30.0 41.0 42 36.265936674780875 39.0 35.0 41.0 30.0 41.0 43 36.237630852335776 39.0 35.0 41.0 30.0 41.0 44 36.20647358868713 39.0 35.0 41.0 30.0 41.0 45 36.16536208572387 39.0 35.0 41.0 30.0 41.0 46 36.04987871698048 39.0 35.0 41.0 30.0 41.0 47 36.04541662007449 39.0 35.0 41.0 30.0 41.0 48 35.95416405033676 39.0 35.0 41.0 29.0 41.0 49 35.93728334637914 39.0 35.0 41.0 29.0 41.0 50 35.85663013840027 38.0 35.0 40.0 29.0 41.0 51 34.755281402410176 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 17.0 9 33.0 10 28.0 11 30.0 12 25.0 13 28.0 14 32.0 15 35.0 16 53.0 17 85.0 18 152.0 19 284.0 20 511.0 21 793.0 22 1210.0 23 1769.0 24 2611.0 25 4039.0 26 5216.0 27 6066.0 28 6039.0 29 6383.0 30 7461.0 31 9075.0 32 11889.0 33 17002.0 34 30278.0 35 34392.0 36 37216.0 37 57491.0 38 102419.0 39 122350.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.28676122728094 20.27899395305229 22.87346138297049 15.560783436696285 2 37.53515917321108 22.48058181442838 23.357733297779916 16.626525714580627 3 32.38450157839958 22.37800734579423 28.680423544388724 16.557067531417463 4 27.814024101774514 24.53250126874081 28.412267648399663 19.24120698108501 5 24.038552517267778 29.29156953989867 27.39146890079737 19.27840904203618 6 24.219186801654953 33.91989299569058 27.66586098041408 14.195059222240381 7 76.0300455026364 5.985876119287441 13.095555536440816 4.888522841635343 8 76.69516674264776 5.565041244828269 12.533008765063608 5.2067832474603675 9 70.58026613451233 7.077208254126634 14.996086257171612 7.3464393541894255 10 37.26936872618423 23.17709901339274 23.597718847037168 15.955813413385862 11 29.025564052057078 24.487127656829266 27.19578175937793 19.291526531735723 12 24.93527271476126 21.762345493174603 32.6451310458725 20.65725074619163 13 23.688681111674995 21.734820268887034 34.65038664338491 19.926111976053054 14 20.674023929741864 25.234824569703328 33.20789285806446 20.883258642490347 15 19.717092304119323 24.818075470724345 35.37872988293178 20.086102342224553 16 22.515203385602586 24.252948209570178 33.285522592188 19.94632581263924 17 22.446820406513158 24.69098634920908 31.018132241499437 21.84406100277833 18 23.077105034535556 24.869040143819294 32.085164764272264 19.96869005737289 19 22.454561875844036 26.852146537412803 30.17216167628616 20.521129910457006 20 23.673628254642733 25.95435113584558 30.47300377611671 19.899016833394978 21 23.060546891800062 26.960097026415614 30.77599628409472 19.2033597976896 22 21.972655409996815 24.48046139157212 31.174896995449735 22.371986202981326 23 21.41268912839657 26.022734114935016 31.29402960681937 21.270547149849044 24 21.965989144739673 24.727113206086514 31.64562133893013 21.661276310243686 25 22.185760857410735 25.95413609503084 29.839278495058362 22.020824552500066 26 21.03701282503419 25.50986177176428 30.83513250815005 22.61799289505148 27 21.59611894337545 25.60469477106755 30.943298037967605 21.85588824758939 28 20.387159482869848 26.171972440369185 30.928890303379582 22.51197777338139 29 21.734175146442794 26.671082171396133 29.94894931057915 21.645793371581927 30 22.371771162166578 26.939883189829427 29.873685025417824 20.814660622586167 31 24.141987149160908 26.630224416594267 27.900040427673172 21.32774800657165 32 24.33186818858219 27.571458062740305 27.877031060495284 20.21964268818222 33 23.39213982813938 27.139871147543804 27.9430485906225 21.524940433694315 34 23.37579672621864 26.60893537593435 28.922774542608188 21.092493355238826 35 22.888944321632245 26.938807985755698 27.956596161951534 22.21565153066052 36 23.036677361363186 28.799556155758367 27.460066920701546 20.7036995621769 37 23.66524166286761 27.29964647290056 28.112285711828104 20.922826152403726 38 23.244191747593693 27.369749778507963 27.764134632753297 21.621923841145048 39 23.548474500460188 25.662110668604903 28.49161770904118 22.297797121893737 40 23.494929337588275 24.995699183705067 30.144206370369098 21.365165108337564 41 21.25334388466931 26.19820741976827 29.801001230033457 22.747447465528957 42 21.835889451817955 26.23928021538488 29.343179335437863 22.581650997359297 43 21.804063411235454 25.266005487841593 30.221836104492635 22.708094996430322 44 22.875611791117954 25.167516794687632 29.162760091865437 22.794111322328977 45 22.765510893967676 24.911833265953877 28.785363461985085 23.537292378093362 46 23.16699209509965 25.73070868850908 28.13464995656176 22.967649259829514 47 21.63676165736257 25.9949938498327 30.08399494224004 22.2842495505647 48 21.27377276207024 25.3518067729255 30.144206370369098 23.230214094635162 49 22.160386041270634 24.304342964294623 30.5536440816467 22.981626912788048 50 20.61037184857686 24.46325812639239 31.30091091289127 23.625459112139485 51 20.782189459559426 23.87641174294881 29.994537963305433 25.34686083418633 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 176.0 1 368.0 2 560.0 3 4770.0 4 8980.0 5 5627.5 6 2275.0 7 2145.5 8 2016.0 9 2109.5 10 2203.0 11 2133.0 12 2063.0 13 2024.5 14 1986.0 15 1943.0 16 1900.0 17 1827.5 18 1755.0 19 1753.5 20 1752.0 21 1852.0 22 1952.0 23 2065.5 24 2179.0 25 2551.5 26 3253.5 27 3583.0 28 4411.0 29 5239.0 30 6129.0 31 7019.0 32 8245.0 33 9471.0 34 10879.5 35 12288.0 36 13512.0 37 14736.0 38 15860.0 39 16984.0 40 18502.5 41 20021.0 42 22132.5 43 24244.0 44 26271.0 45 28298.0 46 34066.5 47 39835.0 48 42023.5 49 44212.0 50 43544.0 51 42876.0 52 38341.0 53 33806.0 54 30130.0 55 26454.0 56 24614.5 57 22775.0 58 20973.0 59 19171.0 60 18217.5 61 17264.0 62 15960.0 63 14656.0 64 12567.0 65 10478.0 66 8686.0 67 6894.0 68 5798.5 69 4703.0 70 3911.5 71 3120.0 72 2567.5 73 2015.0 74 1557.0 75 884.0 76 669.0 77 450.5 78 232.0 79 159.5 80 87.0 81 63.0 82 39.0 83 26.5 84 14.0 85 10.5 86 7.0 87 8.0 88 9.0 89 7.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 465028.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.74597775436704 #Duplication Level Percentage of deduplicated Percentage of total 1 72.17105876779907 29.40680355061857 2 9.340158476556264 7.611477790160485 3 4.128525659555873 5.046624440477912 4 2.6080057333578823 4.2506297437864795 5 2.0284965486770954 4.132653762360363 6 1.5293053160448704 3.7387824232319726 7 1.3054361516886617 3.723389067751691 8 1.0873603691888354 3.54444491311589 9 0.9280622336185879 3.4033322813122044 >10 4.810677695563099 29.56026756222211 >50 0.03572181536134124 0.935443341226428 >100 0.020793295508836903 1.441399574787853 >500 0.004798452809731593 1.362106305036901 >1k 0.0010663228466070208 0.5144286651239843 >5k 5.331614233035104E-4 1.3282165787871791 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6114 1.3147595413609503 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTC 1314 0.2825636305770835 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTT 1054 0.2266530187429574 No Hit CGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTG 934 0.20084812097336074 No Hit GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 850 0.18278469253464308 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTC 790 0.16988224364984475 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGC 671 0.14429238669499472 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCG 649 0.13956148877056868 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 648 0.13934644795582202 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCT 631 0.13569075410512915 No Hit CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT 570 0.12257326440558419 No Hit CGTCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCT 527 0.1133265093714787 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1260139174415304 0.0 2 2.1504081474663892E-4 0.0 0.0 0.5442683021237431 0.0 3 2.1504081474663892E-4 0.0 0.0 0.9139234626732153 0.0 4 2.1504081474663892E-4 0.0 0.0 1.390023826522274 0.0 5 2.1504081474663892E-4 0.0 0.0 2.622852817464755 0.0 6 2.1504081474663892E-4 0.0 0.0 3.7728910947297796 0.0 7 2.1504081474663892E-4 0.0 0.0 4.647032006674867 0.0 8 2.1504081474663892E-4 0.0 0.0 5.931470793156541 0.0 9 2.1504081474663892E-4 0.0 0.0 6.592506257687709 0.0 10 2.1504081474663892E-4 0.0 0.0 7.723835984069776 0.0 11 2.1504081474663892E-4 0.0 0.0 8.817963649500674 0.0 12 2.1504081474663892E-4 0.0 0.0 9.851449805173022 0.0 13 2.1504081474663892E-4 0.0 0.0 10.320883903764935 0.0 14 2.1504081474663892E-4 0.0 0.0 10.567535718279329 0.0 15 2.1504081474663892E-4 0.0 0.0 10.88235547106841 0.0 16 2.1504081474663892E-4 0.0 0.0 11.41845222223178 0.0 17 2.1504081474663892E-4 0.0 0.0 12.007879095452317 0.0 18 2.1504081474663892E-4 0.0 0.0 12.675365784425884 0.0 19 2.1504081474663892E-4 0.0 0.0 13.105232373104416 0.0 20 2.1504081474663892E-4 0.0 0.0 13.50348796201519 0.0 21 2.1504081474663892E-4 0.0 0.0 13.9955013461555 0.0 22 2.1504081474663892E-4 0.0 0.0 14.531813138133618 0.0 23 2.1504081474663892E-4 0.0 0.0 15.070490379073949 0.0 24 2.1504081474663892E-4 0.0 0.0 15.514549661525757 0.0 25 2.1504081474663892E-4 0.0 0.0 15.929578433986771 0.0 26 2.1504081474663892E-4 0.0 0.0 16.295792941500295 0.0 27 2.1504081474663892E-4 0.0 0.0 16.661147285754836 0.0 28 2.1504081474663892E-4 0.0 0.0 17.049080915557774 0.0 29 2.1504081474663892E-4 0.0 0.0 17.469270667572705 0.0 30 2.1504081474663892E-4 0.0 0.0 17.98214301074344 0.0 31 2.1504081474663892E-4 0.0 0.0 18.405773415794318 0.0 32 2.1504081474663892E-4 0.0 0.0 18.839940820767783 0.0 33 2.1504081474663892E-4 0.0 0.0 19.253679348340317 0.0 34 2.1504081474663892E-4 0.0 0.0 19.667417875912847 0.0 35 2.1504081474663892E-4 0.0 0.0 20.126314974582176 0.0 36 2.1504081474663892E-4 0.0 0.0 20.535967726674524 0.0 37 2.1504081474663892E-4 0.0 0.0 20.956802601133695 0.0 38 2.1504081474663892E-4 0.0 0.0 21.422796046689662 0.0 39 2.1504081474663892E-4 0.0 0.0 21.927496838900023 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGGAT 35 1.2098462E-7 45.0 5 TGCGACG 20 7.02895E-4 45.0 1 TATTACG 20 7.02895E-4 45.0 1 GGACGTA 20 7.02895E-4 45.0 8 CGTCGGT 20 7.02895E-4 45.0 26 AATAGCG 40 6.7993824E-9 45.0 10 CGTCATA 20 7.02895E-4 45.0 38 GCCGCAT 30 2.1627038E-6 44.999996 19 TACGCGG 30 2.1627038E-6 44.999996 2 CGTTTTT 2475 0.0 43.272728 1 CGTAAGG 70 0.0 41.785713 2 AGCGAAT 45 1.924127E-8 40.0 13 CTCGTAA 35 6.2402687E-6 38.571426 33 ATTGCGG 35 6.2402687E-6 38.571426 2 TACGGGT 65 9.094947E-12 38.07692 4 ACAACGG 30 1.138877E-4 37.499996 2 CGCGGGT 85 0.0 37.058823 4 GTTTTTT 3055 0.0 36.30933 2 TCGTTCA 50 4.8683432E-8 36.0 16 TCCATCG 25 0.0021058216 36.0 30 >>END_MODULE