##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935471.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 173813 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.042706817096533 31.0 30.0 33.0 28.0 34.0 2 31.032045934423778 31.0 31.0 34.0 28.0 34.0 3 30.844844746940677 31.0 30.0 34.0 27.0 34.0 4 34.799318808144385 35.0 35.0 37.0 32.0 37.0 5 34.71467036412697 35.0 35.0 37.0 32.0 37.0 6 34.88522147365272 35.0 35.0 37.0 32.0 37.0 7 35.31119076248612 36.0 35.0 37.0 33.0 37.0 8 34.95111988171195 37.0 35.0 37.0 32.0 37.0 9 36.6638111073395 39.0 37.0 39.0 32.0 39.0 10 36.15334871384764 37.0 35.0 39.0 32.0 39.0 11 36.44845322271637 38.0 35.0 39.0 32.0 39.0 12 36.49124058614718 38.0 35.0 39.0 32.0 39.0 13 36.364943933998035 39.0 35.0 39.0 32.0 39.0 14 37.332840466478345 39.0 36.0 40.0 32.0 41.0 15 37.501533257006095 39.0 36.0 41.0 32.0 41.0 16 37.629417822602456 39.0 36.0 41.0 33.0 41.0 17 37.4070984333738 39.0 36.0 40.0 32.0 41.0 18 37.49307589190682 39.0 36.0 40.0 33.0 41.0 19 37.38865907613354 39.0 36.0 40.0 32.0 41.0 20 37.208062688061304 39.0 35.0 40.0 32.0 41.0 21 37.40719623963685 39.0 35.0 40.0 33.0 41.0 22 37.50480113685398 39.0 35.0 41.0 33.0 41.0 23 37.466133143090566 39.0 35.0 41.0 33.0 41.0 24 37.45273943836192 39.0 35.0 41.0 33.0 41.0 25 37.2022173255165 39.0 35.0 40.0 32.0 41.0 26 37.16863525743184 39.0 35.0 41.0 32.0 41.0 27 37.122988499134124 39.0 35.0 41.0 32.0 41.0 28 36.99449983603068 39.0 35.0 41.0 31.0 41.0 29 36.97355778911819 39.0 35.0 41.0 31.0 41.0 30 36.76697370162186 39.0 35.0 40.0 31.0 41.0 31 36.77601790429945 39.0 35.0 40.0 31.0 41.0 32 36.624763395143056 39.0 35.0 40.0 31.0 41.0 33 36.60626650480689 39.0 35.0 41.0 30.0 41.0 34 36.36769401598269 39.0 35.0 41.0 30.0 41.0 35 36.44390235482962 39.0 35.0 41.0 30.0 41.0 36 36.1965675754978 39.0 35.0 41.0 30.0 41.0 37 36.140990604845435 39.0 35.0 41.0 30.0 41.0 38 36.05976538003487 39.0 35.0 40.0 29.0 41.0 39 35.9419203396754 39.0 35.0 40.0 29.0 41.0 40 35.77859538699637 38.0 35.0 40.0 28.0 41.0 41 35.50488168318825 38.0 35.0 40.0 26.0 41.0 42 35.68750898954624 38.0 35.0 40.0 28.0 41.0 43 35.562132866931705 38.0 35.0 40.0 28.0 41.0 44 35.65740192045474 38.0 35.0 40.0 28.0 41.0 45 35.63274898885584 38.0 35.0 40.0 28.0 41.0 46 35.4989385143804 38.0 35.0 40.0 28.0 41.0 47 35.24662712225208 38.0 34.0 40.0 27.0 41.0 48 35.26540592475822 38.0 34.0 40.0 27.0 41.0 49 35.23480982435146 37.0 34.0 40.0 28.0 41.0 50 35.01665583126694 37.0 34.0 40.0 27.0 41.0 51 33.79529149143045 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 7.0 10 8.0 11 10.0 12 3.0 13 8.0 14 4.0 15 4.0 16 10.0 17 43.0 18 68.0 19 143.0 20 378.0 21 649.0 22 943.0 23 1252.0 24 1379.0 25 1550.0 26 1760.0 27 2001.0 28 2274.0 29 2634.0 30 3400.0 31 4406.0 32 5662.0 33 7935.0 34 13690.0 35 15085.0 36 15067.0 37 22325.0 38 36192.0 39 34914.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.316293948093644 19.03137279720159 21.420146939526962 11.232186315177806 2 29.977619625689677 31.237594426193667 22.328019193040795 16.456766755075858 3 28.294201239262883 31.388906468445978 24.88651596831077 15.430376323980369 4 27.31556327777554 22.04380569922848 33.059092242812675 17.5815387801833 5 30.18013612330493 26.967488047499323 23.52298159516262 19.329394234033128 6 22.270486097127375 38.43671071784044 24.56260463831819 14.730198546713996 7 71.35312088278782 5.553094417563704 17.960681882252764 5.133102817395708 8 70.32557978977407 11.904748206405735 11.035423127153896 6.734248876666301 9 65.36852824587343 6.438528763671301 12.629665214914878 15.56327777554038 10 42.59347689758533 21.053085787599315 20.45646758297711 15.89696973183824 11 32.33244924142613 21.904575607117994 25.277741020522054 20.48523413093382 12 25.998055381358125 18.58376531099515 30.87456059097996 24.543618716666764 13 25.08615581113035 22.781955319797714 34.45887246638629 17.673016402685647 14 19.5641292653599 31.189266625626395 27.75051348288103 21.496090626132684 15 15.817574059477716 23.012663034410544 40.126457744817706 21.043305161294036 16 18.7828298228556 23.245672072859914 30.578265147025828 27.39323295725866 17 18.535437510427872 25.52513333294978 30.72670053448246 25.212728622139885 18 19.782179698871776 24.054587401402657 31.354961941857052 24.808270957868515 19 20.98347074154407 25.77310097633664 26.990501285864692 26.252926996254594 20 23.93721988573927 25.437683027161373 31.594299620856898 19.030797466242454 21 21.669840575791223 29.3579881827021 29.847594828925338 19.124576412581337 22 18.39390609448085 23.390655474561743 31.271538952782592 26.94389947817482 23 20.240718473301765 27.624516002830628 29.037528838464326 23.097236685403278 24 22.54952161230748 24.93541909983718 27.974317225984247 24.54074206187109 25 18.59066928250476 31.21860850454224 26.920886239809448 23.26983597314355 26 19.660209535535316 24.9037758970848 30.240545874014025 25.195468693365857 27 24.394607998250994 27.13260803277085 26.39215708836508 22.08062688061307 28 17.182259094544136 26.66083664628077 31.685201912400107 24.471702346774983 29 24.31923964260441 23.0891820519754 29.22911404785603 23.362464257564163 30 23.911905323537365 27.06471897959301 27.98122119749386 21.042154499375766 31 23.594322634095263 25.72477317576936 22.609931363016575 28.0709728271188 32 26.85069586279507 28.6020033023997 22.768722707737627 21.778578127067597 33 25.760443695235686 23.208275560516185 24.60287780545759 26.42840293879054 34 23.690978235229814 26.510675265946738 25.211002629262484 24.587343869560964 35 24.853146772680983 23.34060168111706 24.665588880003224 27.14066266619873 36 26.55842773555488 24.082778618400237 26.595248916939468 22.763544729105416 37 23.057538849223018 27.19877109307129 28.223435531289375 21.52025452641632 38 21.652005316058062 25.87378389418513 23.04488156812206 29.42932922163475 39 23.19791960325177 28.771725935344307 26.44738886044197 21.582965600961952 40 24.513701506791783 22.623739306035798 27.240770253088087 25.621788934084332 41 20.149816181758556 25.74260843550252 26.68902786327835 27.418547519460567 42 21.669840575791223 21.883288361630026 29.74748724203598 26.699383820542767 43 25.00273282205589 22.55527492189882 27.09751284426366 25.344479411781627 44 22.711764942783336 23.648403744253883 28.073274150955335 25.56655716200745 45 20.70385989540483 23.224384827371946 26.17525731677147 29.89649796045175 46 27.34663114956879 25.739731780706855 25.422724422223887 21.490912647500473 47 19.425474504208545 23.848043587073462 33.45146795694223 23.275013951775758 48 21.38562708197891 24.875009349128085 27.1234027374247 26.6159608314683 49 21.187137901077595 20.375921248698315 34.01701828977119 24.4199225604529 50 22.654231846869912 21.813673315574782 29.52253283701449 26.00956200054081 51 20.39720849418628 22.153693912423122 26.51815456841548 30.930943024975114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 108.0 1 161.5 2 215.0 3 611.5 4 1008.0 5 701.5 6 395.0 7 377.0 8 359.0 9 369.5 10 380.0 11 374.0 12 368.0 13 361.0 14 354.0 15 355.0 16 356.0 17 338.5 18 321.0 19 352.0 20 383.0 21 374.0 22 365.0 23 489.5 24 614.0 25 660.5 26 948.5 27 1190.0 28 1177.5 29 1165.0 30 1533.0 31 1901.0 32 2357.0 33 2813.0 34 2815.0 35 2817.0 36 3244.0 37 3671.0 38 4158.0 39 4645.0 40 5556.0 41 6467.0 42 7554.0 43 8641.0 44 9087.5 45 9534.0 46 10868.0 47 12202.0 48 20182.0 49 28162.0 50 24145.0 51 20128.0 52 19398.0 53 18668.0 54 15622.5 55 12577.0 56 10802.0 57 9027.0 58 7927.5 59 6828.0 60 6243.5 61 5659.0 62 4974.5 63 4290.0 64 3483.5 65 2677.0 66 2279.5 67 1882.0 68 1468.0 69 1054.0 70 893.0 71 732.0 72 592.0 73 452.0 74 406.5 75 282.0 76 203.0 77 137.0 78 71.0 79 53.5 80 36.0 81 24.5 82 13.0 83 8.5 84 4.0 85 3.5 86 3.0 87 4.0 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 173813.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.08173151605461 #Duplication Level Percentage of deduplicated Percentage of total 1 75.41508664319923 28.71937081806309 2 9.681074466317172 7.373441572264445 3 3.4249369249595865 3.9128258530719795 4 1.8446616609508846 2.809916404411638 5 1.2116450877007447 2.3070771461283104 6 0.8747412790258493 1.9986997520323564 7 0.7372603526159146 1.9653305564025707 8 0.6632321614721035 2.020562328479458 9 0.5907147497393905 2.0245896451933976 >10 5.473553806408726 35.29712967384488 >50 0.046834161744043756 1.2801113840736884 >100 0.021150911755374598 1.5729548422730177 >500 0.009064676466589114 2.0671641361693314 >1k 0.006043117644392742 6.650825887591837 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC 3436 1.9768371755852554 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 3206 1.8445110549843795 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 3172 1.8249498023738158 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1746 1.0045278546483865 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCT 699 0.4021563404348351 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCAGACTT 694 0.3992796856391639 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTA 575 0.33081530150218913 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 572 0.3290893086247864 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTC 541 0.3112540488916249 No Hit GAACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 512 0.2945694510767319 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 470 0.2704055507930937 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 469 0.2698302198339595 No Hit TCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 274 0.1576406828027823 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATG 174 0.10010758688935809 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.28593948668971825 0.0 2 0.0 0.0 0.0 1.9417419870780666 0.0 3 0.0 0.0 0.0 2.3772675231426876 0.0 4 0.0 0.0 0.0 3.239113299925782 0.0 5 0.0 0.0 0.0 6.6364426136134815 0.0 6 0.0 0.0 0.0 7.451686582706702 0.0 7 0.0 0.0 0.0 8.672538877989563 0.0 8 0.0 0.0 0.0 10.328916709337046 0.0 9 0.0 0.0 0.0 10.773072209788682 0.0 10 0.0 0.0 0.0 13.717040727678597 0.0 11 0.0 0.0 0.0 15.223832509651176 0.0 12 0.0 0.0 0.0 18.557300086874974 0.0 13 0.0 0.0 0.0 19.231012640021174 0.0 14 0.0 0.0 0.0 19.539390034117126 0.0 15 0.0 0.0 0.0 20.260855056871467 0.0 16 0.0 0.0 0.0 21.156070029284347 0.0 17 0.0 0.0 0.0 22.27278742096391 0.0 18 0.0 0.00862996438701363 0.0 23.388354150725206 0.0 19 0.0 0.00862996438701363 0.0 24.500468894731693 0.0 20 0.0 0.00862996438701363 0.0 25.16842813828655 0.0 21 0.0 0.00862996438701363 0.0 25.85594863445197 0.0 22 0.0 0.00862996438701363 0.0 26.641850724629343 0.0 23 0.0 0.00862996438701363 0.0 27.40358891452308 0.0 24 0.0 0.00862996438701363 0.0 28.00193311202269 0.0 25 0.0 0.00862996438701363 0.0 28.49671773687814 0.0 26 0.0 0.00862996438701363 0.0 28.9782697496735 0.0 27 0.0 0.00862996438701363 0.0 29.474205036447216 0.0 28 0.0 0.00862996438701363 0.0 29.96553767554786 0.0 29 0.0 0.00862996438701363 0.0 30.47182891958599 0.0 30 0.0 0.00862996438701363 0.0 31.048885871597637 0.0 31 0.0 0.00862996438701363 0.0 31.562656418104513 0.0 32 0.0 0.00862996438701363 0.0 32.0413317761042 0.0 33 0.0 0.00862996438701363 0.0 32.543020372469265 0.0 34 0.0 0.00862996438701363 0.0 33.064270221444886 0.0 35 0.0 0.00862996438701363 0.0 33.57171212740129 0.0 36 0.0 0.00862996438701363 0.0 34.05383947115578 0.0 37 0.0 0.00862996438701363 0.0 34.52503552668673 0.0 38 0.0 0.00862996438701363 0.0 35.03247743264313 0.0 39 0.0 0.00862996438701363 0.0 35.59802776547209 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGGTC 25 3.8771068E-5 45.000004 6 AAGCATA 25 3.8771068E-5 45.000004 25 GTCCGGG 25 3.8771068E-5 45.000004 3 CGAGCAC 50 2.1827873E-11 45.000004 34 GAACCGT 25 3.8771068E-5 45.000004 36 CGTCCTA 25 3.8771068E-5 45.000004 40 TCACGGG 40 6.7575456E-9 45.0 3 TCACGAC 20 7.0167525E-4 45.0 25 ACAACGG 20 7.0167525E-4 45.0 2 CTCACGA 20 7.0167525E-4 45.0 24 TCGGGGT 20 7.0167525E-4 45.0 5 AACGGGC 20 7.0167525E-4 45.0 4 CCATCGA 40 6.7575456E-9 45.0 41 CGAATGC 40 6.7575456E-9 45.0 45 CCCATCG 45 3.8016879E-10 45.0 40 ATCGAGG 20 7.0167525E-4 45.0 2 ATCGAAT 40 6.7575456E-9 45.0 43 CCCTCGA 30 2.154844E-6 44.999996 41 GGATCCT 30 2.154844E-6 44.999996 8 GCATTCT 30 2.154844E-6 44.999996 9 >>END_MODULE