##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935468.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 644106 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10749162404946 31.0 31.0 33.0 28.0 34.0 2 31.156171499722095 31.0 31.0 34.0 28.0 34.0 3 30.950756552492912 31.0 30.0 34.0 27.0 34.0 4 34.76678372814413 35.0 35.0 37.0 32.0 37.0 5 34.77232784665878 35.0 35.0 37.0 32.0 37.0 6 34.94305129900979 36.0 35.0 37.0 32.0 37.0 7 35.297578348905304 37.0 35.0 37.0 33.0 37.0 8 35.013264897392666 37.0 35.0 37.0 32.0 37.0 9 36.815339400657656 39.0 37.0 39.0 32.0 39.0 10 36.27093677127678 37.0 35.0 39.0 32.0 39.0 11 36.623475018087085 38.0 35.0 39.0 32.0 39.0 12 36.76307936892375 39.0 35.0 39.0 33.0 39.0 13 36.78054078055475 39.0 35.0 39.0 32.0 39.0 14 37.907970116719916 40.0 37.0 41.0 33.0 41.0 15 37.997244242407305 40.0 37.0 41.0 33.0 41.0 16 38.034753596457726 40.0 37.0 41.0 33.0 41.0 17 37.84684508450472 40.0 37.0 41.0 33.0 41.0 18 37.77716400716652 39.0 37.0 41.0 33.0 41.0 19 37.59202367312213 39.0 37.0 40.0 33.0 41.0 20 37.4154859603854 39.0 35.0 41.0 32.0 41.0 21 37.52362965102017 39.0 35.0 41.0 33.0 41.0 22 37.618730457409185 39.0 35.0 41.0 33.0 41.0 23 37.62865584236135 39.0 35.0 41.0 33.0 41.0 24 37.600495881112735 39.0 35.0 41.0 33.0 41.0 25 37.308244295193646 39.0 35.0 41.0 33.0 41.0 26 37.283458002254285 39.0 35.0 41.0 32.0 41.0 27 37.29488158781319 39.0 35.0 41.0 33.0 41.0 28 37.13214905621125 39.0 35.0 41.0 32.0 41.0 29 37.08830223596737 39.0 35.0 41.0 32.0 41.0 30 36.753307685380975 39.0 35.0 41.0 31.0 41.0 31 36.74416167525221 39.0 35.0 41.0 31.0 41.0 32 36.509052857759436 39.0 35.0 41.0 30.0 41.0 33 36.3031581758282 39.0 35.0 41.0 30.0 41.0 34 36.13917584993774 39.0 35.0 41.0 29.0 41.0 35 36.038631840100855 39.0 35.0 41.0 28.0 41.0 36 35.87543354665226 39.0 35.0 41.0 27.0 41.0 37 35.83535318720832 39.0 35.0 41.0 27.0 41.0 38 35.753141563655674 39.0 35.0 41.0 26.0 41.0 39 35.61841373935346 39.0 35.0 41.0 26.0 41.0 40 35.500034155868754 39.0 35.0 41.0 25.0 41.0 41 35.355571908971505 39.0 35.0 40.0 24.0 41.0 42 35.44815139123064 39.0 35.0 40.0 24.0 41.0 43 35.4386948732041 39.0 35.0 40.0 25.0 41.0 44 35.43177209962335 39.0 35.0 40.0 25.0 41.0 45 35.460046948794144 39.0 35.0 40.0 25.0 41.0 46 35.28173778850065 38.0 35.0 40.0 24.0 41.0 47 35.16208512263509 38.0 35.0 40.0 24.0 41.0 48 35.1398496520759 38.0 35.0 40.0 24.0 41.0 49 35.13404625946661 38.0 35.0 40.0 24.0 41.0 50 35.01092366784349 38.0 34.0 40.0 24.0 41.0 51 33.904034429115704 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 14.0 9 22.0 10 18.0 11 25.0 12 24.0 13 18.0 14 27.0 15 38.0 16 71.0 17 178.0 18 264.0 19 577.0 20 1236.0 21 2134.0 22 3457.0 23 4638.0 24 6104.0 25 8117.0 26 9796.0 27 10421.0 28 9885.0 29 10474.0 30 12068.0 31 14854.0 32 18874.0 33 25597.0 34 40780.0 35 48249.0 36 51497.0 37 76493.0 38 134201.0 39 153936.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.74231570579998 18.158036099648196 19.563860606794535 16.535787587757294 2 35.36157092155639 27.910002390910815 21.06190595957808 15.666520727954717 3 28.61827090572049 27.809397832033856 28.826776959071953 14.745554303173702 4 25.260749007150995 22.23655733683586 35.24528571384214 17.25740794217101 5 26.932368274787073 27.027538945453077 27.414587040021367 18.62550573973849 6 22.030380092717657 35.72315736850767 28.704281593402325 13.542180945372346 7 69.69427392385725 5.603736031025949 19.78276867472124 4.919221370395556 8 69.4277028936231 9.63273125851956 15.255253017360495 5.684312830496844 9 63.41906456390718 7.030985583118307 16.734046880482406 12.815902972492104 10 36.71352230843992 21.164528819790533 25.779452450373075 16.342496421396476 11 29.169888186106014 22.935044852865833 28.067429895079382 19.82763706594877 12 23.905537287340902 19.559824004123545 33.39512440498924 23.13951430354631 13 23.745315212092418 20.769252265931385 36.82188956476108 18.663542957215117 14 19.602053078220045 27.369873902742714 32.50334572259845 20.524727296438787 15 17.946269713370157 23.998379148773648 37.851533753761025 20.203817384095167 16 19.72905080840731 24.36151813521377 32.05931942878967 23.85011162758925 17 19.49585937718326 25.974761918069383 32.56358425476552 21.965794449981836 18 20.221671588216847 24.935957746085272 31.90887835232089 22.93349231337699 19 20.60375155642084 26.12132164581606 29.704738040012046 23.570188757751055 20 22.903994063088994 25.327818713068968 32.87083181960733 18.897355404234705 21 21.424889692069318 28.46115390944969 31.70394313979376 18.410013258687236 22 20.136902932126077 23.02679993665639 33.29032798949241 23.54596914172512 23 21.150245456493185 26.208419111140092 32.11350305695026 20.52783237541647 24 21.582627704135653 24.651843019627204 30.994122085495245 22.771407190741897 25 20.26964505842206 29.220811481340025 28.854412161973343 21.65513129826457 26 20.193104861622153 23.996205593489268 32.15417959155791 23.656509953330662 27 23.371618957128174 24.652464035422742 29.707377357143077 22.268539650306003 28 19.28844010147398 25.771689752928868 31.88403772049942 23.055832425097734 29 23.088435754363413 23.78692327039338 31.063831108544242 22.06080986669896 30 20.443839989070124 26.32470431885435 32.82021903227108 20.41123665980444 31 21.48869906506072 24.153167335811187 28.956569260339137 25.40156433878896 32 22.943273312156695 28.367691032221405 27.739223047138207 20.949812608483697 33 20.78027529630216 26.938733686691318 28.178591722480462 24.102399294526055 34 21.409985312976435 24.982378676801645 30.876750100138793 22.730885910083124 35 20.269024042626523 24.470040645483817 30.006706970591797 25.254228341297864 36 20.584810574656967 26.33370904788963 27.809397832033856 25.272082545419543 37 18.755608548903442 26.32097822408113 32.021592719210815 22.901820507804615 38 18.81600233501939 26.95876144609738 27.23775279224227 26.987483426640956 39 21.227251415139744 26.472661332140984 29.239286701257246 23.060800551462027 40 20.85029482724893 24.831161330588444 30.86929791059236 23.44924593157027 41 18.6362182622115 25.257488674224426 30.336311104072934 25.76998195949114 42 20.43343797449488 24.18592591902575 30.418129935134903 24.96250617134447 43 21.962999878901922 23.90802135052305 28.415198740579967 25.713780029995064 44 21.034891772472232 23.642071336084435 30.09970408597343 25.223332805469905 45 20.66383483463902 22.978050196706754 28.99383020807134 27.364284760582887 46 23.481228245040413 25.644071006946064 28.13325756940628 22.74144317860725 47 18.92902720980708 24.702300553014567 33.4632808885494 22.905391348628953 48 20.08613489084095 24.012196750224344 30.412696046923955 25.488972312010755 49 19.612765600693052 22.434506121663205 33.837132397462526 24.11559588018121 50 19.53296507096658 22.70635578615942 32.50381148444511 25.256867658428895 51 19.396496849897378 21.898414236166097 30.460980025026934 28.24410888890959 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 278.0 1 513.5 2 749.0 3 7672.5 4 14596.0 5 9297.5 6 3999.0 7 3857.0 8 3715.0 9 3687.5 10 3660.0 11 3541.5 12 3423.0 13 3355.0 14 3287.0 15 3143.0 16 2999.0 17 2900.0 18 2801.0 19 2809.0 20 2817.0 21 2808.0 22 2799.0 23 2801.0 24 2803.0 25 3132.0 26 4021.5 27 4582.0 28 5384.5 29 6187.0 30 7552.0 31 8917.0 32 10184.5 33 11452.0 34 13332.5 35 15213.0 36 16521.0 37 17829.0 38 19249.5 39 20670.0 40 22903.5 41 25137.0 42 27430.5 43 29724.0 44 33154.0 45 36584.0 46 61340.5 47 86097.0 48 73560.5 49 61024.0 50 60221.0 51 59418.0 52 52047.0 53 44676.0 54 40083.0 55 35490.0 56 32920.0 57 30350.0 58 27975.0 59 25600.0 60 24086.5 61 22573.0 62 20556.0 63 18539.0 64 15406.5 65 12274.0 66 10088.0 67 7902.0 68 6373.5 69 4845.0 70 3953.0 71 3061.0 72 2554.0 73 2047.0 74 1642.5 75 955.5 76 673.0 77 500.5 78 328.0 79 238.0 80 148.0 81 112.5 82 77.0 83 61.5 84 46.0 85 27.5 86 9.0 87 6.5 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 644106.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.49130142476418 #Duplication Level Percentage of deduplicated Percentage of total 1 74.22666255040298 28.57080841981816 2 9.105167263808337 7.009394753482839 3 3.6898482845930114 4.260811876017559 4 2.221230637954221 3.419922320776686 5 1.640018640776787 3.1563225922185674 6 1.2578747594294868 2.905034191188186 7 1.0573087451485657 2.8488032725986825 8 0.9060956324199015 2.79014400857094 9 0.7802772682329459 2.70304987738013 >10 5.041316150696041 30.03740117257404 >50 0.04362311608052368 1.1342626880095161 >100 0.022423097001971933 1.5036669974952712 >500 8.153853455262521E-4 0.169166460373607 >1k 0.005707697418683764 3.7083233998967597 >5k 0.001223078018289378 3.8941240391197196 >10k+ 4.0769267276312605E-4 1.8887639304793449 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTC 12036 1.8686365287701092 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9691 1.504566018636684 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGC 7925 1.2303875449072048 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCG 7199 1.1176731780172828 No Hit GAACTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCT 3469 0.5385759486792546 No Hit GCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 3423 0.5314342670305819 TruSeq Adapter, Index 20 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT 1974 0.3064712950973908 No Hit CGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTG 1766 0.2741784737294793 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCT 1623 0.25197715903904017 No Hit CGTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTC 1540 0.2390910812816524 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCAATCCT 1478 0.2294653364508326 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT 1469 0.22806805091087493 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTC 1423 0.22092636926220216 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCT 1173 0.18211288204115472 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCAATCCTCGTA 1147 0.17807627937016576 No Hit CCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGC 1117 0.17341866090364008 TruSeq Adapter, Index 20 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCTGCT 1019 0.15820377391298948 TruSeq Adapter, Index 22 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTTCT 1010 0.15680648837303177 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.105078977683797E-4 0.0 0.0 0.16612172530608316 0.0 2 3.105078977683797E-4 0.0 0.0 0.9839995280279954 0.0 3 3.105078977683797E-4 0.0 0.0 1.4565925484314695 0.0 4 3.105078977683797E-4 0.0 0.0 2.450838837085821 0.0 5 3.105078977683797E-4 0.0 0.0 5.405942500147491 0.0 6 3.105078977683797E-4 0.0 0.0 6.846233383946121 0.0 7 3.105078977683797E-4 0.0 0.0 7.9741533225897605 0.0 8 3.105078977683797E-4 0.0 0.0 9.292104094667648 0.0 9 3.105078977683797E-4 0.0 0.0 9.85691796070833 0.0 10 3.105078977683797E-4 0.0 0.0 11.91931141768591 0.0 11 3.105078977683797E-4 0.0 0.0 12.9779880951272 0.0 12 3.105078977683797E-4 0.0 0.0 15.150456601863668 0.0 13 3.105078977683797E-4 0.0 0.0 15.679562059660988 0.0 14 4.657618466525696E-4 0.0 0.0 15.960571707141371 0.0 15 4.657618466525696E-4 0.0 0.0 16.444343011864508 0.0 16 4.657618466525696E-4 0.0 0.0 17.01769584509382 0.0 17 4.657618466525696E-4 0.0 0.0 17.643058751199337 0.0 18 4.657618466525696E-4 0.0 0.0 18.30707989057702 0.0 19 4.657618466525696E-4 0.0 0.0 18.987713202485306 0.0 20 4.657618466525696E-4 0.0 0.0 19.448506922773582 0.0 21 4.657618466525696E-4 0.0 0.0 19.95277174874943 0.0 22 4.657618466525696E-4 0.0 0.0 20.54677335718034 0.0 23 4.657618466525696E-4 0.0 0.0 21.09637233623037 0.0 24 4.657618466525696E-4 0.0 0.0 21.54909285117667 0.0 25 4.657618466525696E-4 0.0 0.0 21.95259786432668 0.0 26 4.657618466525696E-4 0.0 0.0 22.367591669694118 0.0 27 4.657618466525696E-4 0.0 0.0 22.816120328020542 0.0 28 6.210157955367595E-4 0.0 0.0 23.232666672876825 0.0 29 6.210157955367595E-4 0.0 0.0 23.66085706389942 0.0 30 6.210157955367595E-4 0.0 0.0 24.170555778086214 0.0 31 6.210157955367595E-4 0.0 0.0 24.584773313709235 0.0 32 6.210157955367595E-4 0.0 0.0 25.00194067436105 0.0 33 6.210157955367595E-4 0.0 0.0 25.427181240354848 0.0 34 6.210157955367595E-4 0.0 0.0 25.847608933933234 0.0 35 6.210157955367595E-4 0.0 0.0 26.28061219737124 0.0 36 6.210157955367595E-4 0.0 0.0 26.698711081716365 0.0 37 6.210157955367595E-4 0.0 0.0 27.118673013448095 0.0 38 6.210157955367595E-4 0.0 0.0 27.572480306036585 0.0 39 6.210157955367595E-4 0.0 0.0 28.015264568254292 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGACAG 35 1.2108103E-7 45.000004 1 TACGTAG 35 1.2108103E-7 45.000004 1 TTCGCAC 20 7.030975E-4 45.0 22 TACGAAT 30 2.1640099E-6 44.999996 12 TACACGG 30 2.1640099E-6 44.999996 2 TAGTACG 30 2.1640099E-6 44.999996 1 CGTTTTT 4180 0.0 43.81579 1 CGATGAA 835 0.0 43.383232 19 CTCGAAT 125 0.0 43.199997 43 CCGATGA 855 0.0 42.63158 18 CGGGATC 60 3.6379788E-12 41.249996 6 CACCGAT 955 0.0 41.230366 16 TACGGGT 55 6.002665E-11 40.909092 4 CTAGCGG 50 1.0804797E-9 40.500004 2 CCCTCGA 150 0.0 40.5 41 ACCGATG 910 0.0 40.302197 17 TACGGCT 950 0.0 40.026314 7 GTACGAG 45 1.9261279E-8 40.0 1 GATGAAT 925 0.0 39.405403 20 CCACCGA 1165 0.0 39.012875 15 >>END_MODULE