##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935466.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 437500 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.234098285714285 31.0 31.0 33.0 28.0 34.0 2 31.242678857142856 31.0 31.0 34.0 28.0 34.0 3 31.033090285714287 31.0 31.0 34.0 27.0 34.0 4 34.846272 35.0 35.0 37.0 32.0 37.0 5 34.86401828571429 35.0 35.0 37.0 33.0 37.0 6 35.052848 37.0 35.0 37.0 32.0 37.0 7 35.46052114285714 37.0 35.0 37.0 33.0 37.0 8 35.13392685714286 37.0 35.0 37.0 32.0 37.0 9 37.04136457142857 39.0 37.0 39.0 33.0 39.0 10 36.42021942857143 38.0 35.0 39.0 32.0 39.0 11 36.74366628571428 39.0 37.0 39.0 32.0 39.0 12 36.90358857142857 39.0 37.0 39.0 33.0 39.0 13 36.97106514285714 39.0 37.0 39.0 33.0 39.0 14 38.072512 40.0 37.0 41.0 33.0 41.0 15 38.20074057142857 40.0 37.0 41.0 33.0 41.0 16 38.195563428571425 40.0 37.0 41.0 34.0 41.0 17 38.069792 40.0 37.0 41.0 33.0 41.0 18 38.03892571428572 39.0 37.0 41.0 34.0 41.0 19 37.89936914285714 39.0 37.0 41.0 34.0 41.0 20 37.88928457142857 39.0 36.0 41.0 34.0 41.0 21 37.91507657142857 40.0 36.0 41.0 33.0 41.0 22 38.009712 40.0 37.0 41.0 34.0 41.0 23 38.05112914285714 40.0 37.0 41.0 34.0 41.0 24 38.02343771428571 40.0 37.0 41.0 34.0 41.0 25 37.65502857142857 39.0 36.0 41.0 33.0 41.0 26 37.73008228571429 40.0 36.0 41.0 33.0 41.0 27 37.778100571428574 40.0 36.0 41.0 33.0 41.0 28 37.713188571428574 40.0 36.0 41.0 33.0 41.0 29 37.70229257142857 40.0 36.0 41.0 33.0 41.0 30 37.43533942857143 40.0 36.0 41.0 33.0 41.0 31 37.422724571428574 40.0 36.0 41.0 33.0 41.0 32 37.342304 40.0 36.0 41.0 33.0 41.0 33 37.274304 40.0 36.0 41.0 32.0 41.0 34 37.14955428571429 40.0 36.0 41.0 32.0 41.0 35 37.10166857142857 40.0 36.0 41.0 32.0 41.0 36 36.96354514285714 40.0 36.0 41.0 31.0 41.0 37 36.96512 40.0 36.0 41.0 31.0 41.0 38 36.822882285714286 40.0 35.0 41.0 31.0 41.0 39 36.745808 39.0 35.0 41.0 31.0 41.0 40 36.60131657142857 39.0 35.0 41.0 30.0 41.0 41 36.450534857142856 39.0 35.0 41.0 30.0 41.0 42 36.491065142857146 39.0 35.0 41.0 30.0 41.0 43 36.48885257142857 39.0 35.0 41.0 30.0 41.0 44 36.51538057142857 39.0 35.0 41.0 31.0 41.0 45 36.496736 39.0 35.0 41.0 30.0 41.0 46 36.38893028571429 39.0 35.0 41.0 30.0 41.0 47 36.32390857142857 39.0 35.0 41.0 30.0 41.0 48 36.252601142857145 39.0 35.0 41.0 30.0 41.0 49 36.247654857142855 39.0 35.0 41.0 30.0 41.0 50 36.14710171428572 39.0 35.0 41.0 30.0 41.0 51 34.959801142857145 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 22.0 10 21.0 11 17.0 12 14.0 13 15.0 14 17.0 15 21.0 16 38.0 17 63.0 18 119.0 19 206.0 20 471.0 21 837.0 22 1263.0 23 1893.0 24 2450.0 25 3441.0 26 4427.0 27 4759.0 28 5016.0 29 5444.0 30 6337.0 31 8344.0 32 11149.0 33 15552.0 34 26273.0 35 31822.0 36 35443.0 37 54179.0 38 98299.0 39 119524.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.017828571428566 19.65554285714286 22.751314285714287 13.575314285714285 2 34.8144 25.769828571428572 23.03748571428571 16.378285714285713 3 31.068800000000003 25.595885714285714 27.63771428571429 15.697600000000001 4 27.914742857142855 24.032 30.007314285714287 18.045942857142858 5 26.143542857142858 28.958628571428573 25.670628571428573 19.2272 6 23.384457142857144 35.68822857142857 26.58674285714286 14.340571428571428 7 74.98651428571429 5.905371428571429 14.144000000000002 4.9641142857142855 8 74.98354285714287 8.086857142857143 11.5856 5.344 9 68.58537142857143 7.937142857142857 13.8432 9.634285714285715 10 37.06605714285715 24.821714285714286 22.3872 15.72502857142857 11 28.47062857142857 24.976000000000003 26.944228571428567 19.609142857142857 12 24.8704 21.47725714285714 32.04228571428571 21.61005714285714 13 24.15977142857143 23.059885714285713 33.645714285714284 19.13462857142857 14 19.63977142857143 28.130285714285712 30.42674285714286 21.8032 15 18.386514285714288 26.22674285714286 35.082742857142854 20.304 16 20.565485714285714 25.134857142857143 31.99314285714286 22.306514285714286 17 20.019885714285714 26.327542857142856 30.564342857142858 23.08822857142857 18 20.79497142857143 25.743771428571428 31.058285714285716 22.402971428571426 19 21.492800000000003 27.464228571428574 28.566399999999998 22.47657142857143 20 23.378285714285717 26.095085714285716 30.662628571428574 19.864 21 22.573485714285717 27.86994285714286 30.17142857142857 19.385142857142856 22 20.3248 25.0672 30.126399999999997 24.4816 23 20.542628571428573 27.071085714285715 30.519542857142856 21.866742857142857 24 21.1792 25.8528 30.10034285714286 22.86765714285714 25 20.189714285714285 28.68045714285714 28.1872 22.94262857142857 26 19.380114285714285 26.788114285714286 30.83954285714286 22.992228571428573 27 22.110857142857142 27.381028571428573 28.807314285714288 21.7008 28 19.171657142857143 26.60617142857143 31.232914285714287 22.98925714285714 29 19.864228571428573 25.3888 31.278628571428573 23.468342857142858 30 20.599314285714286 28.110400000000002 29.230171428571428 22.060114285714285 31 21.13942857142857 26.543542857142853 27.032 25.28502857142857 32 21.658057142857142 27.479771428571432 27.962285714285713 22.899885714285713 33 20.773485714285712 28.10834285714286 26.61874285714286 24.499428571428574 34 21.2592 26.252571428571432 29.164114285714287 23.324114285714288 35 20.81417142857143 25.803199999999997 29.408228571428573 23.974400000000003 36 19.864228571428573 29.745371428571428 28.12662857142857 22.263771428571427 37 20.162742857142856 27.978285714285718 29.30102857142857 22.55794285714286 38 20.03382857142857 27.66697142857143 27.209371428571426 25.089828571428573 39 22.083657142857145 26.325257142857144 27.84114285714286 23.74994285714286 40 21.688914285714286 25.690057142857142 31.736685714285713 20.884342857142858 41 19.969142857142856 27.26422857142857 29.789714285714286 22.976914285714287 42 19.920914285714286 26.637485714285713 31.186514285714285 22.255085714285713 43 21.216228571428573 26.826285714285714 28.669942857142853 23.287542857142856 44 20.67474285714286 25.57302857142857 28.917942857142858 24.834285714285713 45 20.551771428571428 24.388571428571428 28.33074285714286 26.728914285714282 46 22.3504 26.5152 28.1216 23.0128 47 20.088 25.31657142857143 32.2448 22.350628571428572 48 19.687314285714287 25.257600000000004 30.20937142857143 24.845714285714283 49 19.840914285714288 24.3824 32.009142857142855 23.767542857142857 50 19.560914285714286 24.015771428571426 31.203657142857143 25.219657142857145 51 19.126857142857144 23.834285714285713 29.434057142857146 27.6048 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 165.0 1 380.5 2 596.0 3 3429.0 4 6262.0 5 3979.5 6 1697.0 7 1661.5 8 1626.0 9 1594.0 10 1562.0 11 1509.0 12 1456.0 13 1429.0 14 1402.0 15 1393.0 16 1384.0 17 1365.5 18 1347.0 19 1317.0 20 1287.0 21 1438.5 22 1590.0 23 1757.5 24 1925.0 25 2364.0 26 3334.0 27 3865.0 28 4719.0 29 5573.0 30 6482.0 31 7391.0 32 8007.5 33 8624.0 34 10190.5 35 11757.0 36 12626.0 37 13495.0 38 14870.0 39 16245.0 40 18309.5 41 20374.0 42 23384.0 43 26394.0 44 37511.0 45 48628.0 46 46161.0 47 43694.0 48 43448.0 49 43202.0 50 37733.0 51 32264.0 52 28774.5 53 25285.0 54 22882.0 55 20479.0 56 19424.5 57 18370.0 58 17801.0 59 17232.0 60 16164.5 61 15097.0 62 13483.0 63 11869.0 64 9956.5 65 8044.0 66 6603.0 67 5162.0 68 4170.0 69 3178.0 70 2866.0 71 2554.0 72 2087.0 73 1620.0 74 1286.0 75 770.5 76 589.0 77 397.5 78 206.0 79 173.0 80 140.0 81 97.5 82 55.0 83 49.5 84 44.0 85 26.0 86 8.0 87 6.0 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 437500.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.36442944494944 #Duplication Level Percentage of deduplicated Percentage of total 1 73.55490345108086 28.218919037790602 2 9.35887711188639 7.18095961285835 3 3.7452509722494414 4.31053250035476 4 2.212736356066627 3.395614712503705 5 1.587722364744936 3.0456031320212693 6 1.2720501901262633 2.928088786172013 7 1.0266249858126044 2.7570117284240916 8 0.8932677689555215 2.74157666380332 9 0.7497715021815979 2.5888100305751705 >10 5.515114613716901 34.277385436986165 >50 0.04575346706182684 1.2511172045474632 >100 0.030100965172254506 2.219537813494761 >500 0.00361211582067054 0.9245379674734161 >1k 0.004214135124115631 4.160305372994915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 4393 1.0041142857142857 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4220 0.9645714285714285 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGC 2954 0.6752 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCG 2499 0.5712 No Hit GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 1758 0.4018285714285715 TruSeq Adapter, Index 21 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT 1169 0.2672 TruSeq Adapter, Index 15 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 1020 0.23314285714285715 TruSeq Adapter, Index 21 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 831 0.18994285714285714 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGCT 827 0.18902857142857143 TruSeq Adapter, Index 15 (95% over 24bp) CGTTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTT 626 0.1430857142857143 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCT 611 0.13965714285714287 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTC 565 0.12914285714285714 No Hit CGTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 543 0.1241142857142857 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTT 500 0.1142857142857143 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACCAGTAT 497 0.1136 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 483 0.1104 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACCAGTATCGTA 476 0.1088 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19451428571428572 0.0 2 0.0 0.0 0.0 0.9766857142857143 0.0 3 0.0 0.0 0.0 1.3945142857142858 0.0 4 0.0 0.0 0.0 2.120457142857143 0.0 5 0.0 0.0 0.0 4.2 0.0 6 0.0 0.0 0.0 5.336 0.0 7 0.0 0.0 0.0 6.2708571428571425 0.0 8 0.0 0.0 0.0 7.662171428571429 0.0 9 0.0 0.0 0.0 8.222857142857142 0.0 10 0.0 0.0 0.0 9.830857142857143 0.0 11 0.0 0.0 0.0 11.130285714285714 0.0 12 0.0 0.0 0.0 12.893257142857143 0.0 13 0.0 0.0 0.0 13.495085714285715 0.0 14 0.0 0.0 0.0 13.765942857142857 0.0 15 0.0 0.0 0.0 14.2128 0.0 16 0.0 0.0 0.0 14.904228571428572 0.0 17 0.0 0.0 0.0 15.664685714285714 0.0 18 0.0 0.0 0.0 16.50057142857143 0.0 19 0.0 0.0 0.0 17.135314285714287 0.0 20 0.0 0.0 0.0 17.645942857142856 0.0 21 0.0 0.0 0.0 18.259657142857144 0.0 22 0.0 0.0 0.0 18.927314285714285 0.0 23 0.0 0.0 0.0 19.576228571428572 0.0 24 4.5714285714285713E-4 0.0 0.0 20.10902857142857 0.0 25 6.857142857142857E-4 0.0 0.0 20.62034285714286 0.0 26 6.857142857142857E-4 0.0 0.0 21.052342857142857 0.0 27 6.857142857142857E-4 0.0 0.0 21.520685714285715 0.0 28 6.857142857142857E-4 0.0 0.0 21.978285714285715 0.0 29 6.857142857142857E-4 0.0 0.0 22.463085714285715 0.0 30 6.857142857142857E-4 0.0 0.0 23.04114285714286 0.0 31 6.857142857142857E-4 0.0 0.0 23.567542857142858 0.0 32 6.857142857142857E-4 0.0 0.0 24.04274285714286 0.0 33 6.857142857142857E-4 0.0 0.0 24.516571428571428 0.0 34 6.857142857142857E-4 0.0 0.0 25.0064 0.0 35 6.857142857142857E-4 0.0 0.0 25.515657142857144 0.0 36 6.857142857142857E-4 0.0 0.0 25.999771428571428 0.0 37 6.857142857142857E-4 0.0 0.0 26.477942857142857 0.0 38 6.857142857142857E-4 0.0 0.0 26.976 0.0 39 6.857142857142857E-4 0.0 0.0 27.481828571428572 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCCGTC 25 3.8868307E-5 45.000004 30 ATACGCG 25 3.8868307E-5 45.000004 1 CCGCAGG 25 3.8868307E-5 45.000004 2 CTGAACG 20 7.028491E-4 45.0 1 TCCCGTG 20 7.028491E-4 45.0 28 TAGTACG 20 7.028491E-4 45.0 1 GCGCGAG 30 2.1624073E-6 44.999996 1 CGTTTTT 1620 0.0 42.36111 1 GGCGAAC 75 0.0 42.000004 32 TACGAAT 110 0.0 40.909092 12 ATCCTGC 95 0.0 40.263157 20 TCGGGCA 45 1.9235813E-8 40.0 5 CCGATGA 365 0.0 39.452057 18 CGTATGG 40 3.451678E-7 39.375 2 AACGGGA 80 0.0 39.375 4 CTACGAA 115 0.0 39.130436 11 CGAATAT 115 0.0 39.130436 14 GCGAACC 75 0.0 39.000004 33 TACGCGG 75 0.0 39.000004 2 CGTCTGG 35 6.239423E-6 38.571426 2 >>END_MODULE