##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935455.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 573441 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.197326316046464 31.0 31.0 33.0 28.0 34.0 2 31.247451786670293 31.0 31.0 34.0 28.0 34.0 3 31.007451507652924 31.0 31.0 34.0 27.0 34.0 4 34.751006642357275 35.0 35.0 37.0 32.0 37.0 5 34.83041149830584 35.0 35.0 37.0 33.0 37.0 6 35.05245875338527 37.0 35.0 37.0 32.0 37.0 7 35.410795530839266 37.0 35.0 37.0 33.0 37.0 8 35.245934629717794 37.0 35.0 37.0 32.0 37.0 9 37.21330354822902 39.0 37.0 39.0 34.0 39.0 10 36.49957362658059 38.0 35.0 39.0 32.0 39.0 11 36.86992035797929 39.0 37.0 39.0 33.0 39.0 12 37.001440427175595 39.0 37.0 39.0 33.0 39.0 13 37.075768910838256 39.0 37.0 39.0 33.0 39.0 14 38.129931414042595 40.0 38.0 41.0 33.0 41.0 15 38.31658008408886 40.0 38.0 41.0 34.0 41.0 16 38.24621539094693 40.0 37.0 41.0 34.0 41.0 17 38.173191313491714 40.0 37.0 41.0 34.0 41.0 18 38.07351758942943 39.0 37.0 41.0 34.0 41.0 19 37.852410274117126 39.0 37.0 41.0 34.0 41.0 20 37.87409864310365 39.0 36.0 41.0 34.0 41.0 21 37.78480436522676 39.0 36.0 41.0 33.0 41.0 22 37.90736623296904 40.0 36.0 41.0 34.0 41.0 23 37.954422512516544 40.0 36.0 41.0 34.0 41.0 24 37.94177779405379 40.0 36.0 41.0 34.0 41.0 25 37.51166728573646 39.0 35.0 41.0 33.0 41.0 26 37.64031347601584 39.0 35.0 41.0 33.0 41.0 27 37.72242828817612 40.0 36.0 41.0 33.0 41.0 28 37.59499931117587 40.0 35.0 41.0 33.0 41.0 29 37.53725666633533 40.0 35.0 41.0 33.0 41.0 30 37.23079619350552 39.0 35.0 41.0 33.0 41.0 31 37.14497219417516 39.0 35.0 41.0 32.0 41.0 32 37.030393710948466 39.0 35.0 41.0 32.0 41.0 33 36.87373417666333 40.0 35.0 41.0 31.0 41.0 34 36.65154915675719 40.0 35.0 41.0 31.0 41.0 35 36.581320484583415 40.0 35.0 41.0 30.0 41.0 36 36.40690498237831 40.0 35.0 41.0 30.0 41.0 37 36.3967731641093 40.0 35.0 41.0 30.0 41.0 38 36.230053309756364 39.0 35.0 41.0 29.0 41.0 39 36.14063347406272 39.0 35.0 41.0 29.0 41.0 40 36.05573720748952 39.0 35.0 41.0 29.0 41.0 41 35.88310567259753 39.0 35.0 41.0 27.0 41.0 42 35.91321687845829 39.0 35.0 41.0 28.0 41.0 43 35.88857790077793 39.0 35.0 41.0 28.0 41.0 44 35.87224143373076 39.0 35.0 41.0 28.0 41.0 45 35.8677387909131 39.0 35.0 41.0 28.0 41.0 46 35.75079737932935 39.0 35.0 41.0 27.0 41.0 47 35.75881215329912 39.0 35.0 41.0 27.0 41.0 48 35.66968877356171 39.0 35.0 41.0 27.0 41.0 49 35.6383202456748 39.0 35.0 41.0 27.0 41.0 50 35.53308884436237 39.0 35.0 41.0 27.0 41.0 51 34.47145565106088 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 9.0 9 20.0 10 25.0 11 14.0 12 14.0 13 14.0 14 14.0 15 36.0 16 57.0 17 133.0 18 221.0 19 412.0 20 684.0 21 1114.0 22 1619.0 23 2568.0 24 3931.0 25 6193.0 26 8353.0 27 8993.0 28 8760.0 29 8575.0 30 9636.0 31 11247.0 32 14313.0 33 20100.0 34 33492.0 35 40108.0 36 45237.0 37 68817.0 38 125227.0 39 153485.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.84444955976291 20.13180083042545 23.063401465887512 17.960348143924136 2 38.70877736332072 21.390343557576106 23.716476498890035 16.184402580213135 3 30.857228555335247 21.339771659159357 31.530532347704472 16.272467437800923 4 26.909655919266324 24.269454050198714 30.46451160625069 18.356378424284276 5 22.964524685189932 28.753611967055026 29.74203100231759 18.539832345437457 6 22.730498865620003 33.24474531817572 29.65291982959014 14.371835986614142 7 75.0007411398906 5.522625692965797 14.83674868033503 4.639884486808582 8 76.10704501422117 4.913844667542084 14.201112232993454 4.777998085243294 9 69.47410457222277 7.691113819904751 16.740170305227565 6.0946113026449105 10 31.264593916375006 29.08668895317914 24.886082439169854 14.762634691276 11 27.64120458774312 24.875793673629897 29.522479208846246 17.960522529780746 12 24.463022351035242 21.16974544896511 34.313905005048476 20.05332719495118 13 23.269351162543312 21.258507849979335 36.39886230667148 19.07327868080587 14 19.807791908845022 24.529463362403455 35.53007196904302 20.1326727597085 15 18.889301602082863 24.633571718799317 37.16511376061356 19.312012918504255 16 21.766145078569547 24.437736401826864 34.48951156265422 19.306606956949363 17 22.076028745764603 24.06385312525613 32.54371417460558 21.316403954373683 18 22.07323857205885 23.751179284355324 33.895030177472485 20.280551966113343 19 21.939310234182766 25.84206570510305 32.17767826158227 20.040945799131908 20 21.95936460769286 26.115328342410116 31.935281920895086 19.990025129001936 21 21.75219421004079 25.93204880711355 33.652110679215475 18.66364630363019 22 20.555732847843107 23.99008790791032 33.55480337122738 21.899375873019196 23 19.16221546767671 25.37924564166148 33.84550459419539 21.61303429646642 24 20.01600862163675 24.624154882542406 33.408668023388636 21.95116847243221 25 20.43348836235986 26.07016240554826 31.644406312070466 21.851942920021415 26 19.522322261575297 25.485272242480043 32.3914753217855 22.600930174159156 27 20.40959750000436 24.516384423157746 32.4962812216078 22.577736855230093 28 19.423794252590938 25.428771224938572 32.96380970317783 22.183624819292653 29 20.91078245190002 24.41663571317712 31.97905277090407 22.69352906401879 30 21.943321108884785 23.759375419615967 32.48651561363767 21.810787857861577 31 21.196600870882968 26.29302753029518 30.653545874815368 21.85682572400648 32 22.261400911340488 26.24873352271637 30.27390786497652 21.21595770096662 33 22.64051576360951 25.141383333246143 30.698711811677228 21.519389091467126 34 21.26373942567762 26.543271234529797 30.470266339518798 21.722723000273785 35 21.03302693738327 26.997546390997506 30.373830960813752 21.59559571080547 36 21.599780971364098 28.370486240083988 29.92757755375008 20.102155234801835 37 21.054999555316066 28.635203970417184 30.35273027216401 19.957066202102745 38 21.871474135961677 28.208307393437167 29.635132472215975 20.28508599838519 39 22.671905217799214 25.92088811229054 29.698783309878436 21.70842336003181 40 22.57512106738095 25.929956176834235 31.028824238238983 20.466098517545834 41 19.87998765348135 26.855770689573994 30.959941824878236 22.30429983206642 42 20.489640608188115 26.585646997685902 31.579883545124954 21.34482884900103 43 20.900319300503455 25.539331858028984 32.14960213866814 21.410746702799415 44 22.003484229415058 25.18637488425139 30.30372784645674 22.50641303987681 45 21.67651074827227 24.231961091027674 29.912754755938277 24.17877340476178 46 21.68034723711768 25.670818793912538 29.874564253340797 22.774269715628982 47 20.16842186031344 25.922631970856635 31.613714401307195 22.29523176752273 48 20.56497529824341 25.06221215434543 31.600809847918093 22.77200269949306 49 21.56141608291001 24.221497939631103 31.726018892963705 22.491067084495178 50 20.167026773460563 23.967766518264302 32.19930210780185 23.665904600473283 51 20.07094016646874 23.80279749791173 30.963080770297207 25.163181565322322 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 263.0 1 491.5 2 720.0 3 7864.5 4 15009.0 5 9410.0 6 3811.0 7 3695.0 8 3579.0 9 3552.5 10 3526.0 11 3547.0 12 3568.0 13 3394.5 14 3221.0 15 3109.0 16 2997.0 17 2895.5 18 2794.0 19 2709.5 20 2625.0 21 2667.0 22 2709.0 23 2865.0 24 3021.0 25 3401.0 26 4383.0 27 4985.0 28 5729.5 29 6474.0 30 7429.0 31 8384.0 32 10006.5 33 11629.0 34 12952.5 35 14276.0 36 15951.0 37 17626.0 38 19040.5 39 20455.0 40 23436.0 41 26417.0 42 29765.5 43 33114.0 44 40734.5 45 48355.0 46 52647.0 47 56939.0 48 56700.5 49 56462.0 50 50306.5 51 44151.0 52 40274.0 53 36397.0 54 32641.0 55 28885.0 56 27356.5 57 25828.0 58 23883.0 59 21938.0 60 19971.0 61 18004.0 62 16301.5 63 14599.0 64 12262.5 65 9926.0 66 7912.0 67 5898.0 68 5027.5 69 4157.0 70 3376.0 71 2595.0 72 2217.5 73 1840.0 74 1502.5 75 941.0 76 717.0 77 527.5 78 338.0 79 246.5 80 155.0 81 104.5 82 54.0 83 38.0 84 22.0 85 20.5 86 19.0 87 12.5 88 6.0 89 4.5 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 573441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.24768557865233 #Duplication Level Percentage of deduplicated Percentage of total 1 73.9755899173461 30.51321873406015 2 9.363461697564231 7.7244224805776724 3 3.7904303879710564 4.690394425523979 4 2.3402471002669474 3.8611910627265558 5 1.6808199552982017 3.4664966515232347 6 1.3079684988030909 3.2370404031247064 7 1.0589185970993564 3.057455894257932 8 0.9122414055273398 3.0102277333615666 9 0.7491852441785374 2.781194165283796 >10 4.749037052140439 31.083786183758395 >50 0.04650245962040834 1.2951701477186848 >100 0.020478147347441085 1.4994761990662955 >500 0.00213314034869178 0.6284038853263398 >1k 0.0025597684184301356 1.330013039847795 >5k 0.0 0.0 >10k+ 4.266280697383559E-4 1.8215089938428852 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10351 1.8050680017647849 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT 1691 0.29488648352664004 No Hit CGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG 1459 0.25442896479323945 No Hit CGTTCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTC 1228 0.21414583191644823 No Hit GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC 1120 0.1953121594026238 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCT 1059 0.1846746221494452 No Hit CCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC 1001 0.17456024246609503 No Hit CGTCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT 903 0.15747042851836543 No Hit CTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGCT 819 0.14282201656316865 No Hit GAATCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTC 668 0.11648975221513634 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCC 650 0.11335080679616562 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.487717132189711E-4 0.0 0.0 0.15014622254076707 0.0 2 3.487717132189711E-4 0.0 0.0 0.645402055311706 0.0 3 3.487717132189711E-4 0.0 0.0 1.1167670257271454 0.0 4 3.487717132189711E-4 0.0 0.0 1.66102528420535 0.0 5 3.487717132189711E-4 0.0 0.0 2.9288104617563095 0.0 6 3.487717132189711E-4 0.0 0.0 4.336453096308077 0.0 7 3.487717132189711E-4 0.0 0.0 5.370212454289107 0.0 8 3.487717132189711E-4 0.0 0.0 6.897309400618372 0.0 9 3.487717132189711E-4 0.0 0.0 7.659724365715043 0.0 10 3.487717132189711E-4 0.0 0.0 8.96587443172009 0.0 11 3.487717132189711E-4 0.0 0.0 10.35189322005228 0.0 12 3.487717132189711E-4 0.0 0.0 11.48139041331192 0.0 13 3.487717132189711E-4 0.0 0.0 12.070117065225542 0.0 14 3.487717132189711E-4 0.0 0.0 12.385581079832102 0.0 15 5.231575698284567E-4 0.0 0.0 12.716739821533514 0.0 16 6.975434264379422E-4 0.0 0.0 13.371384327245524 0.0 17 6.975434264379422E-4 0.0 0.0 14.041026016625947 0.0 18 6.975434264379422E-4 0.0 0.0 14.804312911005665 0.0 19 6.975434264379422E-4 0.0 0.0 15.247776144363588 0.0 20 6.975434264379422E-4 0.0 0.0 15.748961096259249 0.0 21 6.975434264379422E-4 0.0 0.0 16.30403127784724 0.0 22 6.975434264379422E-4 0.0 0.0 16.886131267209706 0.0 23 6.975434264379422E-4 0.0 0.0 17.45079267091122 0.0 24 6.975434264379422E-4 0.0 0.0 17.900010637537253 0.0 25 6.975434264379422E-4 0.0 0.0 18.349228604163287 0.0 26 6.975434264379422E-4 0.0 0.0 18.76897536102232 0.0 27 6.975434264379422E-4 0.0 0.0 19.20511438840264 0.0 28 6.975434264379422E-4 0.0 0.0 19.638288856220605 0.0 29 6.975434264379422E-4 0.0 0.0 20.086460507706985 0.0 30 6.975434264379422E-4 0.0 0.0 20.639263673159054 0.0 31 6.975434264379422E-4 0.0 0.0 21.099642334608095 0.0 32 8.719292830474277E-4 0.0 0.0 21.536478905414857 0.0 33 8.719292830474277E-4 0.0 0.0 21.98552248618428 0.0 34 8.719292830474277E-4 0.0 0.0 22.45026079404856 0.0 35 8.719292830474277E-4 0.0 0.0 22.93069382900769 0.0 36 8.719292830474277E-4 0.0 0.0 23.38601530061506 0.0 37 8.719292830474277E-4 0.0 0.0 23.837325897520408 0.0 38 8.719292830474277E-4 0.0 0.0 24.33484874642727 0.0 39 8.719292830474277E-4 0.0 0.0 24.922703469057847 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTCA 35 1.210501E-7 45.000004 16 AACTCGA 30 2.1635915E-6 45.000004 24 AGTAGCG 25 3.8883525E-5 45.0 1 CGTTTTT 4305 0.0 43.37979 1 TTGTGCG 55 6.002665E-11 40.909092 1 CGTTTCT 220 0.0 40.909092 1 ATTACGG 45 1.9254003E-8 40.000004 2 CGCACGG 45 1.9254003E-8 40.000004 2 TACCGTG 40 3.454188E-7 39.375 1 GGCCGAT 70 0.0 38.57143 8 TCGAGTT 35 6.2428135E-6 38.57143 27 GCGTAAG 65 9.094947E-12 38.07692 1 CGCGGTA 30 1.13920825E-4 37.500004 31 CGAAAGG 60 1.546141E-10 37.500004 2 AACGAAG 30 1.13920825E-4 37.500004 1 CATCGAC 30 1.13920825E-4 37.500004 32 CGTAAGG 165 0.0 36.81818 2 TTTAGCG 50 4.8716174E-8 36.0 1 TCGTTTA 25 0.0021062302 36.0 38 CGCATCG 25 0.0021062302 36.0 21 >>END_MODULE