##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935454.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 124008 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.031933423650088 31.0 30.0 33.0 28.0 34.0 2 31.039199083930068 31.0 31.0 34.0 28.0 34.0 3 30.855751241855366 31.0 30.0 34.0 27.0 34.0 4 34.69117315011935 35.0 35.0 37.0 32.0 37.0 5 34.72618702019225 35.0 35.0 37.0 32.0 37.0 6 34.92598058189794 36.0 35.0 37.0 32.0 37.0 7 35.3135523514612 37.0 35.0 37.0 33.0 37.0 8 35.07277756273789 37.0 35.0 37.0 32.0 37.0 9 36.82597896909877 39.0 37.0 39.0 32.0 39.0 10 36.269168118185924 37.0 35.0 39.0 32.0 39.0 11 36.53228017547255 38.0 35.0 39.0 32.0 39.0 12 36.537078253015935 38.0 35.0 39.0 33.0 39.0 13 36.40800593510096 39.0 35.0 39.0 32.0 39.0 14 37.34749371008322 39.0 36.0 40.0 32.0 41.0 15 37.58977646603445 39.0 36.0 41.0 33.0 41.0 16 37.61811334752596 39.0 36.0 41.0 33.0 41.0 17 37.559665505451264 39.0 36.0 40.0 33.0 41.0 18 37.595711566995675 39.0 36.0 40.0 33.0 41.0 19 37.43225437068576 39.0 36.0 40.0 33.0 41.0 20 37.454478743306886 39.0 35.0 40.0 33.0 41.0 21 37.462994322946905 39.0 35.0 40.0 33.0 41.0 22 37.607549512934646 39.0 35.0 41.0 33.0 41.0 23 37.64055544803561 39.0 35.0 41.0 33.0 41.0 24 37.65475614476485 39.0 35.0 41.0 33.0 41.0 25 37.27095026127347 39.0 35.0 41.0 33.0 41.0 26 37.31284271982453 39.0 35.0 41.0 33.0 41.0 27 37.29943229469067 39.0 35.0 41.0 33.0 41.0 28 37.17715792529514 39.0 35.0 41.0 32.0 41.0 29 37.14348267853687 39.0 35.0 41.0 32.0 41.0 30 36.90670763176569 39.0 35.0 41.0 31.0 41.0 31 36.86191213470099 39.0 35.0 40.0 31.0 41.0 32 36.87177440165151 39.0 35.0 40.0 32.0 41.0 33 36.77351461196052 39.0 35.0 41.0 31.0 41.0 34 36.64025708018838 39.0 35.0 41.0 31.0 41.0 35 36.70386587962067 39.0 35.0 41.0 31.0 41.0 36 36.52175666086059 39.0 35.0 41.0 31.0 41.0 37 36.484355848009805 39.0 35.0 41.0 31.0 41.0 38 36.29302948196891 39.0 35.0 40.0 30.0 41.0 39 36.19926133797819 39.0 35.0 40.0 30.0 41.0 40 36.08084155860912 39.0 35.0 40.0 30.0 41.0 41 35.88720888974905 38.0 35.0 40.0 29.0 41.0 42 36.00754790013548 38.0 35.0 40.0 29.0 41.0 43 35.93332688213663 38.0 35.0 40.0 29.0 41.0 44 35.89623250112896 38.0 35.0 40.0 29.0 41.0 45 35.92985129991614 38.0 35.0 40.0 29.0 41.0 46 35.81882620476098 38.0 35.0 40.0 29.0 41.0 47 35.742169860009035 38.0 35.0 40.0 29.0 41.0 48 35.716768273014644 38.0 35.0 40.0 29.0 41.0 49 35.68577027288562 38.0 35.0 40.0 29.0 41.0 50 35.48653312689504 38.0 35.0 40.0 28.0 41.0 51 34.156989871621185 36.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 11.0 10 10.0 11 6.0 12 6.0 13 3.0 14 7.0 15 9.0 16 11.0 17 18.0 18 32.0 19 98.0 20 215.0 21 299.0 22 473.0 23 648.0 24 782.0 25 1019.0 26 1182.0 27 1351.0 28 1479.0 29 1803.0 30 2256.0 31 2925.0 32 3991.0 33 5499.0 34 10298.0 35 11219.0 36 10076.0 37 15330.0 38 26311.0 39 26636.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.60289658731695 20.63899103283659 24.079091671505065 12.6790207083414 2 31.322979162634667 26.95955099670989 25.417714986129923 16.299754854525514 3 29.981130249661312 26.366847300174186 27.065189342623057 16.586833107541448 4 26.95793819753564 23.583155925424165 30.73027546609896 18.72863041094123 5 25.676569253596544 27.713534610670283 26.454744855170638 20.155151280562546 6 22.997709825172567 34.944519708405906 26.929714211986322 15.128056254435199 7 73.25978969098767 5.933488162054061 15.03209470356751 5.774627443390749 8 72.4098445261596 8.021256693116573 12.04841623121089 7.520482549512934 9 68.0044835817044 6.499580672214695 14.295851880523838 11.20008386555706 10 39.62486291207019 23.249306496355075 21.27685310625121 15.848977485323529 11 30.85042900458035 24.346009934842915 26.552319205212566 18.25124185536417 12 28.29252951422489 19.786626669247145 31.56893103670731 20.35191277982066 13 24.005709309076835 25.081446358299463 33.591381201212826 17.321463131410876 14 17.519031030256112 32.030998000129024 29.183601057996256 21.266369911618604 15 14.93452035352558 24.23633959099413 42.04728727178892 18.781852783691374 16 17.610154183601058 24.075866073156572 33.55589961937939 24.758080123862978 17 17.892394039094253 23.826688600735434 30.818979420682535 27.461937939487775 18 19.919682601122506 23.675085478356237 32.99222630798013 23.413005612541127 19 20.757531772143732 26.301528933617185 28.885233210760596 24.055706083478483 20 21.953422359847753 26.104767434359072 30.782691439261985 21.15911876653119 21 20.26320882523708 28.97313076575705 31.509257467260177 19.254402941745692 22 17.758531707631768 24.468582672085674 29.634378427198243 28.138507193084315 23 17.501290239339397 27.596606670537383 29.570672859815495 25.33143023030772 24 20.973646861492806 23.949261337978196 30.357718856847942 24.719372943681055 25 18.205277078898135 28.272369524546804 28.815882846267982 24.70647055028708 26 18.429456164118445 26.171698600090316 30.848816205406106 24.550029030385137 27 21.004290045803497 28.570737371782467 28.270756725372557 22.154215857041482 28 17.292432746274432 27.569995484162312 31.96164763563641 23.17592413392684 29 20.984130056125412 24.09683246242178 31.742306947938843 23.176730533513968 30 20.361589574866137 29.02393393974582 28.3376878911038 22.276788594284238 31 21.535707373717823 30.45126120895426 24.344397135668665 23.668634281659248 32 23.297690471582477 28.43929423908135 26.085413844268114 22.17760144506806 33 22.48000129023934 27.32404361008967 24.23714599058125 25.958809109089735 34 21.63650732210825 27.076478936842786 27.485323527514353 23.80169021353461 35 20.001935359009096 25.304819043932646 27.032933359138124 27.66031223792013 36 25.041126378943297 28.57396297013096 25.054835171924395 21.330075479001355 37 19.921295400296753 30.238371717953683 29.749693568156893 20.09063931359267 38 19.174569382620476 27.9312624991936 25.424166182826912 27.470001935359008 39 22.670311592800466 24.710502548222696 28.280433520418036 24.338752338558802 40 22.336462163731372 22.92916586026708 28.36994387458874 26.364428101412813 41 20.04709373588801 26.537804012644344 24.72179214244242 28.693310109025223 42 22.852557899490357 23.907328559447777 28.15060318689117 25.089510354170695 43 24.313753951357977 23.69766466679569 28.297367911747628 23.691213470098702 44 20.71398619443907 25.039513579769046 28.35623508160764 25.890265144184244 45 19.74469389071673 23.567027933681697 27.603864266821493 29.08441390878008 46 23.544448745242242 25.34352622411457 26.828914263595898 24.283110767047287 47 18.879427133733305 24.82662408876847 31.881814076511194 24.412134700987036 48 20.52286949229082 23.329946455067414 28.98280756080253 27.16437649183924 49 21.573608154312627 20.356751177343398 32.78175601574092 25.28788465260306 50 21.338139474872587 21.275240307076963 30.26256370556738 27.124056512483065 51 19.589865169989032 21.597800141926328 26.667634346171216 32.14470034191342 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 67.0 1 109.0 2 151.0 3 556.5 4 962.0 5 633.0 6 304.0 7 309.0 8 314.0 9 336.5 10 359.0 11 342.5 12 326.0 13 323.5 14 321.0 15 311.0 16 301.0 17 298.0 18 295.0 19 315.5 20 336.0 21 356.0 22 376.0 23 397.5 24 419.0 25 417.0 26 566.0 27 717.0 28 903.5 29 1090.0 30 1241.0 31 1392.0 32 1467.0 33 1542.0 34 1895.5 35 2249.0 36 2354.5 37 2460.0 38 3153.0 39 3846.0 40 4559.0 41 5272.0 42 6184.5 43 7097.0 44 8507.5 45 9918.0 46 13917.5 47 17917.0 48 16972.5 49 16028.0 50 15780.5 51 15533.0 52 12592.0 53 9651.0 54 8119.5 55 6588.0 56 5576.0 57 4564.0 58 4107.0 59 3650.0 60 3377.0 61 3104.0 62 2739.5 63 2375.0 64 2012.0 65 1649.0 66 1267.0 67 885.0 68 673.0 69 461.0 70 447.0 71 433.0 72 353.0 73 273.0 74 231.0 75 130.0 76 71.0 77 62.0 78 53.0 79 37.0 80 21.0 81 11.5 82 2.0 83 11.5 84 21.0 85 12.5 86 4.0 87 3.5 88 3.0 89 2.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 124008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.71163150764467 #Duplication Level Percentage of deduplicated Percentage of total 1 76.18944558669696 34.06554415844139 2 10.37225408505573 9.275208051093479 3 3.681059048443531 4.937584671956648 4 1.7909317173466075 3.20301916005419 5 1.1885438083901454 2.6570866395716406 6 0.8530822782527144 2.2885620282562416 7 0.705190635934062 2.207115669956777 8 0.5951736825018937 2.128894910005806 9 0.5789416729791148 2.3296884071995354 >10 3.962413880171699 28.231243145603507 >50 0.046892471954694655 1.3749112960454164 >100 0.023446235977347327 2.1635700922521126 >500 0.005410669840926307 1.3813624927424037 >1k 0.00721422645456841 3.7562092768208504 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC 1212 0.9773562995935746 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGC 1202 0.9692923037223405 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 1138 0.9176827301464421 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 1106 0.891877943358493 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 603 0.4862589510354171 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 602 0.48545255144829363 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 508 0.40965099025869295 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTT 281 0.2265982839816786 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCT 280 0.22579188439455516 No Hit TCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 273 0.22014708728469135 No Hit GAACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT 236 0.1903103025611251 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAATCACGT 231 0.18627830462550804 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTA 223 0.17982710792852075 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTC 209 0.16853751370879297 No Hit ACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 206 0.16611831494742274 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCC 184 0.1483775240307077 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 159 0.12821753435262243 No Hit CGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 159 0.12821753435262243 No Hit ACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 132 0.1064447455002903 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.42819818076253147 0.0 2 0.0 0.0 0.0 2.285336429907748 0.0 3 0.0 0.0 0.0 2.9610992839171666 0.0 4 0.0 0.0 0.0 4.024740339332946 0.0 5 0.0 0.0 0.0 7.168085929940004 0.0 6 0.0 0.0 0.0 8.60912199212954 0.0 7 0.0 0.0 0.0 10.09128443326237 0.0 8 0.0 0.0 0.0 12.407264047480808 0.0 9 0.0 0.0 0.0 13.194310044513257 0.0 10 0.0 0.0 0.0 15.921553448164634 0.0 11 0.0 0.0 0.0 18.42381136700858 0.0 12 0.0 0.0 0.0 21.395393845558353 0.0 13 0.0 0.0 0.0 22.34371976001548 0.0 14 0.0 0.0 0.0 22.75901554738404 0.0 15 0.0 0.0 0.0 23.488000774143604 0.0 16 0.0 0.0 0.0 24.835494484226825 0.0 17 0.0 0.0 0.0 26.337816915037738 0.0 18 0.0 0.0 0.0 28.161892781110897 0.0 19 0.0 0.0 0.0 29.189245855106122 0.0 20 0.0 0.0 0.0 30.09644539061996 0.0 21 0.0 0.0 0.0 31.12702406296368 0.0 22 0.0 0.0 0.0 32.163247532417266 0.0 23 0.0 0.0 0.0 33.160763821688924 0.0 24 0.0 0.0 0.0 33.93087542739178 0.0 25 0.0 0.0 0.0 34.60825108057545 0.0 26 0.0 0.0 0.0 35.304980323850074 0.0 27 0.0 0.0 0.0 35.950906393135924 0.0 28 0.0 0.0 0.0 36.58312366944068 0.0 29 0.0 0.0 0.0 37.22340494161667 0.0 30 0.0 0.0 0.0 37.95642216631185 0.0 31 0.0 0.0 0.0 38.595897038900716 0.0 32 0.0 0.0 0.0 39.263595897038904 0.0 33 8.063995871234114E-4 0.0 0.0 39.881297980775436 0.0 34 8.063995871234114E-4 0.0 0.0 40.48529127153087 0.0 35 8.063995871234114E-4 0.0 0.0 41.16992452099865 0.0 36 8.063995871234114E-4 0.0 0.0 41.74891942455326 0.0 37 8.063995871234114E-4 0.0 0.0 42.34323592026321 0.0 38 8.063995871234114E-4 0.0 0.0 42.947229211018644 0.0 39 8.063995871234114E-4 0.0 0.0 43.539126507967225 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAG 25 3.8706377E-5 45.000004 6 GGAATGC 30 2.1498145E-6 45.000004 8 CGTTGGG 25 3.8706377E-5 45.000004 3 TACGGGA 30 2.1498145E-6 45.000004 4 ACGGGTA 25 3.8706377E-5 45.000004 5 CCTCGAT 30 2.1498145E-6 45.000004 15 ACGGGCT 30 2.1498145E-6 45.000004 5 CAGGGAG 50 2.1827873E-11 45.000004 5 AGACGGG 50 2.1827873E-11 45.000004 3 CGGGCAT 30 2.1498145E-6 45.000004 6 TCGTCGG 30 2.1498145E-6 45.000004 2 GCCTCGA 30 2.1498145E-6 45.000004 14 CGGGATA 25 3.8706377E-5 45.000004 6 CTCGATC 30 2.1498145E-6 45.000004 16 CGATCAG 30 2.1498145E-6 45.000004 18 GAGTGGG 20 7.0089404E-4 45.0 3 ACTATGG 20 7.0089404E-4 45.0 2 AATTTGC 20 7.0089404E-4 45.0 11 CGTGCGG 20 7.0089404E-4 45.0 2 ACGTTAA 20 7.0089404E-4 45.0 21 >>END_MODULE