##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935452.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 339806 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217656545205205 31.0 31.0 33.0 28.0 34.0 2 31.214010347080393 31.0 31.0 34.0 28.0 34.0 3 31.027389157342718 31.0 31.0 34.0 27.0 34.0 4 34.836774512515966 35.0 35.0 37.0 32.0 37.0 5 34.854761246122784 35.0 35.0 37.0 33.0 37.0 6 35.03945780827884 36.0 35.0 37.0 32.0 37.0 7 35.4852003790398 37.0 35.0 37.0 33.0 37.0 8 35.28430045378834 37.0 35.0 37.0 33.0 37.0 9 37.12123682336392 39.0 37.0 39.0 33.0 39.0 10 36.35718910201703 38.0 35.0 39.0 32.0 39.0 11 36.72102905775648 39.0 35.0 39.0 32.0 39.0 12 36.88025814729581 39.0 37.0 39.0 33.0 39.0 13 36.94237300106531 39.0 37.0 39.0 33.0 39.0 14 37.98173663796401 40.0 37.0 41.0 33.0 41.0 15 38.167395513910876 40.0 37.0 41.0 33.0 41.0 16 38.12124859478644 40.0 37.0 41.0 34.0 41.0 17 38.03490226776455 40.0 37.0 41.0 33.0 41.0 18 38.0060181397621 39.0 37.0 41.0 34.0 41.0 19 37.85679475936269 39.0 37.0 41.0 33.0 41.0 20 37.92488949577112 39.0 37.0 41.0 34.0 41.0 21 37.898580366444385 39.0 37.0 41.0 33.0 41.0 22 38.02554692971872 40.0 37.0 41.0 34.0 41.0 23 38.068756878925036 40.0 37.0 41.0 34.0 41.0 24 38.0599018263362 40.0 37.0 41.0 34.0 41.0 25 37.65872291837107 39.0 36.0 41.0 33.0 41.0 26 37.76042506606711 40.0 36.0 41.0 33.0 41.0 27 37.83044737291278 40.0 36.0 41.0 33.0 41.0 28 37.74881255775354 40.0 36.0 41.0 33.0 41.0 29 37.72976639612014 40.0 36.0 41.0 33.0 41.0 30 37.46370576152275 40.0 36.0 41.0 33.0 41.0 31 37.44784671253598 39.0 36.0 41.0 33.0 41.0 32 37.41677604280089 40.0 36.0 41.0 33.0 41.0 33 37.375167007056966 40.0 36.0 41.0 33.0 41.0 34 37.256558153770094 40.0 36.0 41.0 32.0 41.0 35 37.24471904557306 40.0 36.0 41.0 32.0 41.0 36 37.09130503875741 40.0 36.0 41.0 32.0 41.0 37 37.07281801969359 40.0 36.0 41.0 32.0 41.0 38 36.907582561814685 39.0 35.0 41.0 31.0 41.0 39 36.81768126519249 39.0 35.0 41.0 31.0 41.0 40 36.73777684914334 39.0 35.0 41.0 31.0 41.0 41 36.60025426272638 39.0 35.0 41.0 30.0 41.0 42 36.63947075684361 39.0 35.0 41.0 31.0 41.0 43 36.59472169414313 39.0 35.0 41.0 31.0 41.0 44 36.5938476660212 39.0 35.0 41.0 31.0 41.0 45 36.59757332124801 39.0 35.0 41.0 31.0 41.0 46 36.51539702065296 39.0 35.0 41.0 31.0 41.0 47 36.49392594598094 39.0 35.0 41.0 31.0 41.0 48 36.39681171021112 39.0 35.0 41.0 31.0 41.0 49 36.37419292184364 39.0 35.0 41.0 31.0 41.0 50 36.24859478643697 39.0 35.0 40.0 30.0 41.0 51 35.034516753677096 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 12.0 9 14.0 10 22.0 11 13.0 12 8.0 13 8.0 14 14.0 15 9.0 16 29.0 17 45.0 18 109.0 19 171.0 20 344.0 21 639.0 22 941.0 23 1247.0 24 1715.0 25 2384.0 26 3126.0 27 3395.0 28 3618.0 29 4068.0 30 4811.0 31 6357.0 32 8642.0 33 12453.0 34 21195.0 35 24378.0 36 27645.0 37 43506.0 38 79015.0 39 89864.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.72436037032895 20.525535158296204 24.029004785083252 11.72109968629159 2 34.313402353107364 24.403336021141474 24.556364513869678 16.726897111881485 3 32.29430910578389 23.767090634067674 27.731411452416964 16.20718880773147 4 27.98567417879614 24.510455966051218 28.205799779874397 19.298070075278247 5 24.734701565010624 29.913538901608565 26.149037980494754 19.20272155288606 6 23.90746484758951 35.7315644809097 26.089592296781106 14.271378374719692 7 77.43447731941167 5.918965527389157 11.915328157831233 4.731228995367945 8 78.12987410463617 5.9342683766619775 10.62253167984085 5.313325838860997 9 71.72151168607971 7.249430557435713 12.715490603461976 8.313567153022607 10 37.25920083812528 23.927770551432285 22.094960065449108 16.71806854499332 11 28.646345267593865 25.070775677886793 26.269989346862623 20.012889707656722 12 24.418344584851358 21.33982331094801 31.91438644402983 22.327445660170802 13 24.27708751464071 22.75739686762447 33.89845970936358 19.06705590837125 14 20.504346597764606 26.944491857118475 31.25754106755031 21.29362047756661 15 19.891644055725916 25.412441216458802 34.87372206494294 19.822192662872347 16 21.752117384625343 25.149349923191465 31.281083912585416 21.81744877959777 17 22.08936863975327 25.20055561114283 29.2684649476466 23.4416108014573 18 22.970753900755135 24.48691312101611 31.233409651389323 21.308923326839434 19 22.47959129621019 27.185217447602454 28.777302343101653 21.5578889130857 20 23.267393748197502 26.199949382883176 29.805830385572946 20.72682648334638 21 22.432799891702913 28.305856871273612 29.785524681730163 19.475818555293316 22 21.019346332907602 24.23265039463694 29.985638864528585 24.762364407926878 23 20.37221238000506 27.25908312390011 29.6168990541662 22.75180544192863 24 21.58113747255787 25.429804064672197 29.93943603114718 23.049622431622748 25 20.37280095113094 27.97831703972267 28.20344549537089 23.44543651377551 26 19.07058733512651 25.973938070546136 31.16484111522457 23.790633479102784 27 21.408391847112764 25.361824099633317 30.21577017474677 23.014013878507146 28 20.050558259712894 25.23174988081435 31.819037921637637 22.898653937835117 29 21.21180909106961 24.2535446696056 32.25546341147596 22.27918282784883 30 21.82245163416773 25.365061240825646 31.641289441622572 21.17119768338405 31 22.913662501544998 25.1246299359046 28.374425407438363 23.587282155112035 32 22.321559948912025 26.751146242267648 29.828784659482178 21.098509149338152 33 22.40601990547548 25.320624120821883 29.09159932432035 23.181756649382297 34 21.128231991194976 24.641707327121946 30.691335644455954 23.538725037227124 35 20.042318263950605 25.945098085378127 31.335232456166167 22.6773511945051 36 23.787984909036332 26.63254916040329 29.068350764848176 20.5111151657122 37 21.553768915204557 26.071346591878896 30.52094430351436 21.853940189402188 38 21.918388727685798 28.65546812004497 27.706397179567166 21.71974597270207 39 22.570819820721237 25.38948694254957 28.450645368239524 23.58904786848967 40 21.36130615704255 25.873880979146925 29.764630406761505 23.00018245704902 41 20.63971795671648 26.105778002742742 28.24641118755996 25.008092852980816 42 21.838931625692307 25.766172463111303 29.73167042371235 22.663225487484034 43 23.038145294668134 24.069321907205875 30.199290183222192 22.693242614903795 44 21.671483140380097 24.378616033854613 29.94355602902833 24.00634479673696 45 21.25065478537754 23.95690482216323 29.685467590330955 25.106972802128276 46 22.568759821780663 25.48689546388233 28.98124223821828 22.963102476118728 47 20.15414677786737 24.688204446066283 31.82080363501527 23.33684514105107 48 20.878972119385768 24.66613302884587 30.405878648405267 24.049016203363095 49 22.121445766113606 22.94426820009064 31.61333231314338 23.32095372065237 50 20.74242361818214 22.970753900755135 31.158072547276976 25.12874993378575 51 20.56967799273703 22.701776896229024 29.09365932326092 27.634885787773023 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 136.0 1 289.0 2 442.0 3 1809.0 4 3176.0 5 2096.0 6 1016.0 7 972.5 8 929.0 9 952.0 10 975.0 11 946.0 12 917.0 13 902.5 14 888.0 15 846.0 16 804.0 17 801.0 18 798.0 19 906.5 20 1015.0 21 1017.0 22 1019.0 23 1139.5 24 1260.0 25 1702.5 26 2190.0 27 2235.0 28 2901.0 29 3567.0 30 4049.5 31 4532.0 32 5275.5 33 6019.0 34 7089.0 35 8159.0 36 9012.0 37 9865.0 38 11032.0 39 12199.0 40 14040.0 41 15881.0 42 19109.5 43 22338.0 44 28696.5 45 35055.0 46 35991.5 47 36928.0 48 37196.5 49 37465.0 50 32581.0 51 27697.0 52 24840.5 53 21984.0 54 19230.5 55 16477.0 56 15887.0 57 15297.0 58 13873.0 59 12449.0 60 11548.0 61 10647.0 62 9442.0 63 8237.0 64 7158.5 65 6080.0 66 5106.0 67 4132.0 68 3633.5 69 3135.0 70 2378.5 71 1622.0 72 1365.0 73 1108.0 74 877.0 75 468.5 76 291.0 77 216.5 78 142.0 79 98.5 80 55.0 81 35.5 82 16.0 83 14.5 84 13.0 85 11.0 86 9.0 87 5.5 88 2.0 89 1.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 339806.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.371200813292205 #Duplication Level Percentage of deduplicated Percentage of total 1 75.01423349705688 31.78443151358988 2 9.73151341605602 8.246718183379134 3 3.6960634231959215 4.698199365686957 4 1.9615147802472483 3.3244694660838756 5 1.4595412134522339 3.0921256925230387 6 1.1064109786320604 2.8127977054590105 7 0.874551445178545 2.5939056433650527 8 0.7528027547830856 2.551772535657095 9 0.6097871792616818 2.3253673523280955 >10 4.720082380997542 32.60392577797488 >50 0.04689931796475813 1.4144572269482951 >100 0.021699684431455254 1.8296889563942196 >500 0.0013999796407390488 0.38053022062794356 >1k 0.003499949101847622 2.341610359982552 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2051 0.6035796895875882 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC 1934 0.5691482787237424 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC 1348 0.3966969388415743 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG 1286 0.3784512339393654 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 1276 0.3755083783099769 No Hit CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 659 0.19393418597670437 No Hit CTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGCT 624 0.1836341912738445 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTG 488 0.14361135471416042 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCT 450 0.13242850332248401 No Hit TCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 345 0.10152851921390442 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9428556293885333E-4 0.0 0.0 0.19010847365849926 0.0 2 2.9428556293885333E-4 0.0 0.0 0.9732023566387881 0.0 3 2.9428556293885333E-4 0.0 0.0 1.4110992742918018 0.0 4 2.9428556293885333E-4 0.0 0.0 2.0338075254704155 0.0 5 2.9428556293885333E-4 0.0 0.0 3.802463758732924 0.0 6 2.9428556293885333E-4 0.0 0.0 4.920160326774689 0.0 7 2.9428556293885333E-4 0.0 0.0 5.870408409504247 0.0 8 2.9428556293885333E-4 0.0 0.0 7.48397615109798 0.0 9 2.9428556293885333E-4 0.0 0.0 8.14376438320689 0.0 10 2.9428556293885333E-4 0.0 0.0 9.8450292225564 0.0 11 2.9428556293885333E-4 0.0 0.0 11.435642690240902 0.0 12 2.9428556293885333E-4 0.0 0.0 13.123664679258164 0.0 13 5.885711258777067E-4 0.0 0.0 13.759027209643149 0.0 14 5.885711258777067E-4 0.0 0.0 14.032712783176283 0.0 15 5.885711258777067E-4 0.0 0.0 14.46972684414048 0.0 16 5.885711258777067E-4 0.0 0.0 15.340223539313609 0.0 17 5.885711258777067E-4 0.0 0.0 16.306657328004803 0.0 18 5.885711258777067E-4 0.0 0.0 17.38256534610925 0.0 19 5.885711258777067E-4 0.0 0.0 18.117984967893445 0.0 20 5.885711258777067E-4 0.0 0.0 18.76541320635892 0.0 21 5.885711258777067E-4 0.0 0.0 19.549978517153907 0.0 22 5.885711258777067E-4 0.0 0.0 20.371329523316245 0.0 23 5.885711258777067E-4 0.0 0.0 21.19621195623385 0.0 24 5.885711258777067E-4 0.0 0.0 21.82304020529361 0.0 25 5.885711258777067E-4 0.0 0.0 22.414259901237767 0.0 26 5.885711258777067E-4 0.0 0.0 22.986939606716774 0.0 27 5.885711258777067E-4 0.0 0.0 23.571096449150396 0.0 28 5.885711258777067E-4 0.0 0.0 24.16084471727986 0.0 29 5.885711258777067E-4 0.0 0.0 24.760304408986304 0.0 30 5.885711258777067E-4 0.0 0.0 25.46953261566894 0.0 31 5.885711258777067E-4 0.0 0.0 26.08282372883351 0.0 32 5.885711258777067E-4 0.0 0.0 26.687580560672856 0.0 33 5.885711258777067E-4 0.0 0.0 27.28851168019399 0.0 34 5.885711258777067E-4 0.0 0.0 27.88473423070811 0.0 35 5.885711258777067E-4 0.0 0.0 28.478308211155777 0.0 36 5.885711258777067E-4 0.0 0.0 29.04716220431658 0.0 37 5.885711258777067E-4 0.0 0.0 29.61778191085502 0.0 38 5.885711258777067E-4 0.0 0.0 30.21282731911738 0.0 39 5.885711258777067E-4 0.0 0.0 30.87732412023331 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGCGAG 25 3.8849867E-5 45.000004 1 ACGACTC 25 3.8849867E-5 45.000004 40 GTACGAG 25 3.8849867E-5 45.000004 1 AACGTCT 40 6.7902874E-9 45.0 33 TAACGTC 40 6.7902874E-9 45.0 32 CACGACT 20 7.026267E-4 45.0 39 CGATGTT 20 7.026267E-4 45.0 13 CGTTTTT 965 0.0 42.901554 1 ATAACGT 45 1.9213985E-8 40.0 31 ACGGGCG 40 3.4486402E-7 39.375 5 TACGGGC 75 0.0 39.0 4 CGTCGGG 35 6.2353065E-6 38.57143 3 AATGGGT 65 9.094947E-12 38.07692 4 CGTAAGG 65 9.094947E-12 38.07692 2 ACGTTAG 30 1.13823015E-4 37.500004 1 TGTTCGG 30 1.13823015E-4 37.500004 2 AGCTGCG 30 1.13823015E-4 37.500004 1 CGATGTA 30 1.13823015E-4 37.500004 10 GTAAGCG 30 1.13823015E-4 37.500004 1 CTAATGG 30 1.13823015E-4 37.500004 2 >>END_MODULE