##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935450.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 397735 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16279683709002 31.0 31.0 33.0 28.0 34.0 2 31.196364413491395 31.0 31.0 34.0 28.0 34.0 3 30.950366450023257 31.0 30.0 34.0 27.0 34.0 4 34.78485423711768 35.0 35.0 37.0 32.0 37.0 5 34.81593271902146 35.0 35.0 37.0 33.0 37.0 6 35.00378392648371 36.0 35.0 37.0 32.0 37.0 7 35.39219580876714 37.0 35.0 37.0 33.0 37.0 8 35.162935120117666 37.0 35.0 37.0 32.0 37.0 9 36.98315461299609 39.0 37.0 39.0 33.0 39.0 10 36.3753378505789 38.0 35.0 39.0 32.0 39.0 11 36.70549737890806 39.0 35.0 39.0 32.0 39.0 12 36.84214363835217 39.0 37.0 39.0 33.0 39.0 13 36.90053176109721 39.0 37.0 39.0 33.0 39.0 14 37.986428149395955 40.0 37.0 41.0 33.0 41.0 15 38.11718355186242 40.0 37.0 41.0 33.0 41.0 16 38.077767860510136 40.0 37.0 41.0 33.0 41.0 17 37.93408676631425 40.0 37.0 41.0 33.0 41.0 18 37.87295812538499 39.0 37.0 41.0 33.0 41.0 19 37.717108124756436 39.0 37.0 41.0 33.0 41.0 20 37.712225476762164 39.0 36.0 41.0 33.0 41.0 21 37.68019912755981 39.0 36.0 41.0 33.0 41.0 22 37.79850654330144 39.0 36.0 41.0 33.0 41.0 23 37.82614052069845 40.0 36.0 41.0 33.0 41.0 24 37.82818459527072 40.0 36.0 41.0 33.0 41.0 25 37.4614831483274 39.0 35.0 41.0 33.0 41.0 26 37.537739952480926 39.0 35.0 41.0 33.0 41.0 27 37.56163525965781 39.0 36.0 41.0 33.0 41.0 28 37.385153431304765 39.0 35.0 41.0 33.0 41.0 29 37.313570593485615 39.0 35.0 41.0 32.0 41.0 30 37.0272543276302 39.0 35.0 41.0 31.0 41.0 31 36.89323293147447 39.0 35.0 41.0 31.0 41.0 32 36.784695840195106 39.0 35.0 41.0 31.0 41.0 33 36.69048989905339 39.0 35.0 41.0 31.0 41.0 34 36.48989653915295 39.0 35.0 41.0 30.0 41.0 35 36.50777024903516 39.0 35.0 41.0 30.0 41.0 36 36.31150137654468 39.0 35.0 41.0 30.0 41.0 37 36.27192728826983 39.0 35.0 41.0 30.0 41.0 38 36.04971651979333 39.0 35.0 41.0 29.0 41.0 39 36.05995449231272 39.0 35.0 41.0 29.0 41.0 40 36.02161740857606 39.0 35.0 41.0 29.0 41.0 41 35.84127622663331 39.0 35.0 41.0 28.0 41.0 42 35.9006373590456 39.0 35.0 41.0 28.0 41.0 43 35.83708750801413 39.0 35.0 41.0 28.0 41.0 44 35.84022527562322 39.0 35.0 41.0 28.0 41.0 45 35.78830879857191 39.0 35.0 40.0 28.0 41.0 46 35.69712999861717 39.0 35.0 40.0 27.0 41.0 47 35.618467069782646 38.0 35.0 40.0 27.0 41.0 48 35.57259230392095 38.0 35.0 40.0 27.0 41.0 49 35.516409166907614 38.0 35.0 40.0 27.0 41.0 50 35.40820646913146 38.0 35.0 40.0 27.0 41.0 51 34.248564999308584 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 23.0 10 26.0 11 19.0 12 15.0 13 12.0 14 14.0 15 31.0 16 47.0 17 83.0 18 151.0 19 300.0 20 570.0 21 915.0 22 1580.0 23 2122.0 24 2939.0 25 4226.0 26 5209.0 27 5577.0 28 5610.0 29 5939.0 30 6879.0 31 8678.0 32 11034.0 33 15016.0 34 25035.0 35 28994.0 36 33101.0 37 49949.0 38 87972.0 39 95646.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.95473116522307 19.65580097300967 22.440569726073896 14.948898135693364 2 35.62045080267012 24.925138597307253 22.659308333438094 16.795102266584536 3 29.96542924308899 25.007102719147174 29.48546142532088 15.542006612442957 4 26.27226671024677 23.7816636705344 31.04629967189209 18.89976994732674 5 25.552189271751292 28.057374885287945 27.33754887047909 19.052886972481677 6 22.707330257583568 35.02256527587464 27.889675286308723 14.38042918023307 7 74.29569939784028 5.489333350094912 15.344136171068676 4.87083108099614 8 74.08500634844809 7.0903993865262045 13.199240700466392 5.625353564559317 9 67.9869762530328 7.203540045507688 15.164116811444806 9.645366890014708 10 35.57519453907753 25.394798043923718 23.018089934252707 16.01191748274605 11 28.057374885287945 24.788364111782972 28.00382164003671 19.150439362892378 12 24.278728298993048 21.613134373389318 32.58476121035363 21.523376117264007 13 23.980036959281932 23.08471721120847 34.749770575885954 18.185475253623647 14 20.166442480546092 27.790865777464894 31.66379624624436 20.378895495744654 15 18.668711579317886 24.582196688750045 36.917294178284536 19.83179755364753 16 21.221667693313385 25.17203665757351 32.408261782342514 21.198033866770587 17 20.698455001445687 25.74528266307969 30.934918978716986 22.621343356757638 18 22.514488289941795 24.114548631626587 31.96525324650835 21.405709831923264 19 22.008120985078 26.67630457465398 29.470627427809976 21.844947012458043 20 24.02101902020189 25.774447810728248 30.372987039108956 19.831546129960902 21 22.37343960174488 28.361094698731566 30.640501841678503 18.62496385784505 22 20.92347920097552 24.429079663595108 30.984700868668835 23.662740266760533 23 20.166191056859468 27.109507586709743 30.633461978452992 22.0908393779778 24 20.939067469546305 25.08604975674758 30.790853206280566 23.184029567425547 25 20.42239179353087 28.0126214690686 28.964260122946182 22.60072661445435 26 20.464630972883953 25.859177593121046 30.544457993387557 23.13173344060744 27 23.876450400392223 25.164745370661368 28.742001583969223 22.216802644977182 28 20.116157743220988 26.278300878725787 31.40457842533345 22.200962952719774 29 23.496800633587693 24.714696971601693 30.40315788150402 21.3853445133066 30 24.432599595207865 25.04355915370787 30.288760104089405 20.235081146994858 31 23.32180974769633 25.008359837580297 29.565162733981172 22.104667680742203 32 23.87242762140621 27.29857819905213 28.788012118621698 20.04098206091996 33 22.24521352156587 25.5542006612443 30.00465133820257 22.195934478987265 34 21.36623631312306 25.01288546393956 32.48519743044992 21.13568079248746 35 21.792650885639937 25.3601015751694 29.72758243554125 23.119665103649414 36 22.00736671401813 27.83536776999761 29.85731705784002 20.299948458144243 37 21.023797251939104 28.38573422002087 30.239229637824177 20.351238890215846 38 19.456673413202257 28.079248746024366 29.71098847222397 22.75308936854941 39 21.56360390712409 26.104567111267553 30.23017838510566 22.101650596502697 40 22.21856261078356 23.45079009893522 32.1943002250242 22.136347065257016 41 19.549700177253698 26.199605264812 30.174110902988172 24.07658365494613 42 21.988509937521215 25.88255999597722 29.365029479427257 22.76390058707431 43 22.49336870026525 25.670861251838534 29.225489333350097 22.610280714546118 44 21.800445019925327 24.8989905338982 29.737136535633024 23.563427910543453 45 21.56083824657121 23.55789658943769 29.88899644235483 24.992268721636265 46 23.079185890102707 25.158962625868988 28.713087860007292 23.048763624021017 47 20.17448803851811 24.59376217833482 32.575458533948485 22.65629124919859 48 20.539806655184986 24.39991451594655 30.553006398732823 24.507272430135643 49 20.95013011175783 23.393465498384604 32.362754095063295 23.293650294794272 50 20.284360189573462 23.292644600047772 32.195557343457324 24.22743786692144 51 20.326599368926544 22.484820294919984 29.57421398669969 27.614366349453785 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 311.5 2 477.0 3 3352.5 4 6228.0 5 4134.0 6 2040.0 7 1961.0 8 1882.0 9 1870.0 10 1858.0 11 1860.5 12 1863.0 13 1721.5 14 1580.0 15 1587.0 16 1594.0 17 1529.0 18 1464.0 19 1392.0 20 1320.0 21 1399.5 22 1479.0 23 1588.0 24 1697.0 25 2058.0 26 2789.0 27 3159.0 28 3703.5 29 4248.0 30 5128.5 31 6009.0 32 6583.0 33 7157.0 34 8196.5 35 9236.0 36 9947.0 37 10658.0 38 12304.5 39 13951.0 40 15968.5 41 17986.0 42 20590.5 43 23195.0 44 33077.5 45 42960.0 46 42353.5 47 41747.0 48 41451.5 49 41156.0 50 35919.0 51 30682.0 52 27450.0 53 24218.0 54 22377.5 55 20537.0 56 18852.0 57 17167.0 58 15888.5 59 14610.0 60 13879.5 61 13149.0 62 11484.5 63 9820.0 64 8407.5 65 6995.0 66 5716.5 67 4438.0 68 3687.0 69 2936.0 70 2620.5 71 2305.0 72 1865.5 73 1426.0 74 1114.5 75 670.5 76 538.0 77 399.5 78 261.0 79 211.5 80 162.0 81 145.5 82 129.0 83 79.0 84 29.0 85 18.5 86 8.0 87 8.0 88 8.0 89 4.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 397735.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.51396812419338 #Duplication Level Percentage of deduplicated Percentage of total 1 75.613510104953 32.146303583603455 2 9.081497772672371 7.721810136546527 3 3.544308195860023 4.52047816983331 4 2.1101650309242506 3.588459554460045 5 1.4671309931212326 3.118678013778613 6 1.1606764974858115 2.960697816996732 7 0.9656431742719802 2.8737326191240715 8 0.8309391399239894 2.826121608629852 9 0.6895791633282934 2.6385071911962306 >10 4.47034127238414 29.75980094105322 >50 0.03996378279296747 1.1832272532824941 >100 0.01670128236124014 1.210107255178753 >500 0.005964743700442907 1.7740801251530924 >1k 0.0035788462202657437 3.677995731163587 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3827 0.9621984487158536 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 3300 0.8296981658642061 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 2347 0.5900913925100884 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 2295 0.5770173608055614 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1632 0.4103234565728437 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 1103 0.27732032634794523 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 950 0.23885250229424113 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 938 0.23583541805473493 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 900 0.2262813179629653 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 810 0.20365318616666875 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 645 0.16216827787345844 No Hit CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 631 0.15864834626070123 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 547 0.1375287565841578 No Hit CGTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 539 0.13551736709115364 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTATTCAT 520 0.13074031704526884 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 516 0.12973462229876676 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTC 462 0.11615774322098886 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16493393842633913 0.0 2 0.0 0.0 0.0 0.9727582435541252 0.0 3 0.0 0.0 0.0 1.5057764592002212 0.0 4 0.0 0.0 0.0 2.2318880661747142 0.0 5 0.0 0.0 0.0 4.358932455026588 0.0 6 0.0 0.0 0.0 5.752573949991829 0.0 7 0.0 0.0 0.0 6.8550668158447206 0.0 8 0.0 0.0 0.0 8.493092134209965 0.0 9 0.0 0.0 0.0 9.21618665694495 0.0 10 2.51423686625517E-4 0.0 0.0 11.059625127283242 0.0 11 2.51423686625517E-4 0.0 0.0 12.534225049341899 0.0 12 2.51423686625517E-4 0.0 0.0 14.318578953323193 0.0 13 2.51423686625517E-4 0.0 0.0 14.997925754585339 0.0 14 2.51423686625517E-4 0.0 0.0 15.30415980489522 0.0 15 2.51423686625517E-4 0.0 0.0 15.74767118810263 0.0 16 2.51423686625517E-4 0.0 0.0 16.462468729178976 0.0 17 2.51423686625517E-4 0.0 0.0 17.288144116057175 0.0 18 2.51423686625517E-4 0.0 0.0 18.229474398783108 0.0 19 5.02847373251034E-4 0.0 0.0 18.902535607879617 0.0 20 7.542710598765509E-4 0.0 0.0 19.46773605541378 0.0 21 7.542710598765509E-4 0.0 0.0 20.110877845801852 0.0 22 7.542710598765509E-4 0.0 0.0 20.777653462732722 0.0 23 7.542710598765509E-4 0.0 0.0 21.472337108879028 0.0 24 0.001005694746502068 0.0 0.0 22.002338240285617 0.0 25 0.001005694746502068 0.0 0.0 22.51700252680805 0.0 26 0.001257118433127585 0.0 0.0 23.011301494713816 0.0 27 0.001257118433127585 0.0 0.0 23.521691578563615 0.0 28 0.0015085421197531018 0.0 0.0 24.005682175317737 0.0 29 0.0015085421197531018 0.0 0.0 24.53492903566445 0.0 30 0.0015085421197531018 0.0 0.0 25.15192276264347 0.0 31 0.0015085421197531018 0.0 0.0 25.699272128427218 0.0 32 0.0015085421197531018 0.0 0.0 26.259192678542245 0.0 33 0.0015085421197531018 0.0 0.0 26.81257621280501 0.0 34 0.0015085421197531018 0.0 0.0 27.341823073151723 0.0 35 0.0015085421197531018 0.0 0.0 27.863024375526418 0.0 36 0.0015085421197531018 0.0 0.0 28.360591851358315 0.0 37 0.0015085421197531018 0.0 0.0 28.879530340553384 0.0 38 0.0017599658063786189 0.0 0.0 29.401988761361206 0.0 39 0.0017599658063786189 0.0 0.0 29.93752121387356 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAA 25 3.8861897E-5 45.0 31 GCACGTG 35 1.209246E-7 45.0 12 CTAACGG 40 6.7957444E-9 45.0 2 GCGATAC 20 7.0277177E-4 45.0 9 TACTCAC 25 3.8861897E-5 45.0 30 CCAGTAT 20 7.0277177E-4 45.0 11 ATGTTAG 25 3.8861897E-5 45.0 1 GGCCTAT 40 6.7957444E-9 45.0 8 CGGAGAT 20 7.0277177E-4 45.0 22 GCATCCG 20 7.0277177E-4 45.0 9 ATCGAAT 25 3.8861897E-5 45.0 43 TACCGGA 20 7.0277177E-4 45.0 19 CGTTTTT 1960 0.0 43.27806 1 TAGGGTA 105 0.0 40.714287 5 CGTTTCT 100 0.0 40.5 1 ATGGGCG 90 0.0 40.0 5 CGTTCTG 90 0.0 40.0 1 GTAGGGT 125 0.0 39.600002 4 TTTAGCG 40 3.450623E-7 39.375 1 CGTGGCA 40 3.450623E-7 39.375 15 >>END_MODULE