##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935449.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 299972 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2060725667729 31.0 31.0 33.0 28.0 34.0 2 31.238332244342807 31.0 31.0 34.0 28.0 34.0 3 31.040427106529943 31.0 31.0 34.0 27.0 34.0 4 34.858753483658475 35.0 35.0 37.0 32.0 37.0 5 34.85839678369981 35.0 35.0 37.0 33.0 37.0 6 35.056248583201096 36.0 35.0 37.0 32.0 37.0 7 35.52814596028963 37.0 35.0 37.0 33.0 37.0 8 35.28213966636886 37.0 35.0 37.0 32.0 37.0 9 37.13427586574747 39.0 37.0 39.0 34.0 39.0 10 36.303068286373396 37.0 35.0 39.0 32.0 39.0 11 36.711989785713335 39.0 35.0 39.0 32.0 39.0 12 36.87307815396104 39.0 37.0 39.0 33.0 39.0 13 36.92449628632006 39.0 37.0 39.0 33.0 39.0 14 38.001466803568334 40.0 37.0 41.0 33.0 41.0 15 38.16487538836958 40.0 37.0 41.0 33.0 41.0 16 38.11478071286653 40.0 37.0 41.0 34.0 41.0 17 38.05388169562492 40.0 37.0 41.0 33.0 41.0 18 38.052944941527876 39.0 37.0 41.0 34.0 41.0 19 37.9250563385916 39.0 37.0 41.0 34.0 41.0 20 37.95180550184684 39.0 37.0 41.0 34.0 41.0 21 38.00995092875335 40.0 37.0 41.0 34.0 41.0 22 38.12990212419826 40.0 37.0 41.0 34.0 41.0 23 38.12344485485312 40.0 37.0 41.0 34.0 41.0 24 38.13601269451816 40.0 37.0 41.0 34.0 41.0 25 37.785366634219194 40.0 36.0 41.0 33.0 41.0 26 37.84774578960703 40.0 36.0 41.0 33.0 41.0 27 37.89131985651994 40.0 37.0 41.0 33.0 41.0 28 37.82066326190444 40.0 36.0 41.0 33.0 41.0 29 37.836221380662195 40.0 36.0 41.0 33.0 41.0 30 37.59224527622578 40.0 36.0 41.0 33.0 41.0 31 37.592468630405506 40.0 36.0 41.0 33.0 41.0 32 37.54526755830544 40.0 36.0 41.0 33.0 41.0 33 37.54824116917579 40.0 36.0 41.0 33.0 41.0 34 37.42562305815209 40.0 36.0 41.0 33.0 41.0 35 37.47987812195805 40.0 36.0 41.0 33.0 41.0 36 37.344162121798036 40.0 36.0 41.0 33.0 41.0 37 37.321163308575464 40.0 36.0 41.0 33.0 41.0 38 37.18872761457736 40.0 36.0 41.0 32.0 41.0 39 37.095275559052176 40.0 36.0 41.0 32.0 41.0 40 37.01117770991959 39.0 36.0 41.0 31.0 41.0 41 36.85806341925247 39.0 35.0 41.0 31.0 41.0 42 36.940811142373285 39.0 35.0 41.0 31.0 41.0 43 36.89485685330631 39.0 35.0 41.0 31.0 41.0 44 36.926389796380995 39.0 35.0 41.0 31.0 41.0 45 36.93729414745376 39.0 35.0 41.0 31.0 41.0 46 36.84995599589295 39.0 35.0 41.0 31.0 41.0 47 36.76155774538957 39.0 35.0 41.0 31.0 41.0 48 36.73370181216914 39.0 35.0 41.0 31.0 41.0 49 36.72800794740842 39.0 35.0 41.0 31.0 41.0 50 36.5843978771352 39.0 35.0 41.0 31.0 41.0 51 35.40420439240996 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 12.0 10 18.0 11 11.0 12 10.0 13 10.0 14 3.0 15 14.0 16 16.0 17 41.0 18 73.0 19 132.0 20 341.0 21 578.0 22 797.0 23 1133.0 24 1452.0 25 1793.0 26 2287.0 27 2491.0 28 2730.0 29 3303.0 30 4087.0 31 5389.0 32 7387.0 33 10451.0 34 18245.0 35 21482.0 36 23835.0 37 37112.0 38 69962.0 39 84763.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.11621084634566 20.331897643780085 23.876561812435828 10.675329697438428 2 33.639139653034285 25.06533943168029 24.385275959089515 16.91024495619591 3 31.639286333391116 25.720067206272585 26.294454149053912 16.346192311282387 4 27.97261077700585 24.69397143733415 28.634339204992465 18.699078580667532 5 25.83774485618658 29.670769271798704 25.71573346845706 18.775752403557668 6 23.337844865520783 36.94711506407265 25.78073953569 13.934300534716574 7 77.66958249436614 6.31592281946315 11.538743616070834 4.475751070099876 8 77.77859266864907 7.29868121024629 9.359540223754218 5.56318589735042 9 72.16140173082822 6.982651714159989 11.748096489005642 9.107850066006161 10 37.271145306895306 22.316416198845225 23.89089648367181 16.521542010587655 11 29.860120277892605 26.813835958022747 23.668875761737763 19.657168002346886 12 25.09067512967877 22.21607350019335 30.250156681290253 22.443094688837625 13 24.521955382502366 24.525622391423198 32.26067766324857 18.691744562825864 14 21.938714279999466 28.161961783099756 29.298401184110517 20.60092275279026 15 19.65150080674196 26.070766604883122 34.23086154707773 20.046871041297187 16 21.131305588521595 25.50404704439081 30.434173856226582 22.930473510861013 17 21.394996866374193 25.724734308535464 29.310068939767714 23.57019988532263 18 21.978384649233927 25.048671209312868 30.55851879508754 22.41442534636566 19 21.73769551824837 27.484231861640417 28.88002880268825 21.89804381742296 20 23.13115890816476 27.503233635139278 29.6817702985612 19.68383715813476 21 22.58510794340805 28.242969343805424 29.903791020495245 19.26813169229128 22 20.226554478417984 25.789407011321057 29.251063432587042 24.732975077673917 23 20.653927699918658 27.13653274305602 29.648433853826354 22.561105703198965 24 21.729694771512005 26.63248569866521 28.780686197378426 22.857133332444363 25 19.81451602149534 29.176056431933645 27.722920805941886 23.286506740629125 26 19.27646580347499 27.619577827263882 29.923126158441455 23.18083021081968 27 21.318323043484057 27.14886722760791 29.787113463923298 21.745696264984733 28 18.35037936874108 27.684917258944168 31.15557452028856 22.809128852026188 29 20.14988065552785 27.413558598802556 29.640099742642644 22.79646100302695 30 21.61135039270332 27.270211886442734 29.950795407571373 21.167642313282574 31 20.31389596362327 28.377315216086835 28.311309055511845 22.997479764778046 32 21.818036350059337 30.06680623524862 26.183110423639537 21.9320469910525 33 22.84046511007694 26.683157094662167 27.998946568346376 22.47743122691451 34 20.351232781726296 28.325977091195178 28.905697865134076 22.41709226194445 35 20.76927179870121 27.4785646660355 27.603242969343807 24.148920565919486 36 22.763457922739455 27.78626005093809 28.762684517221608 20.68759750910085 37 19.590161748429853 28.659674902990943 30.876548477857934 20.873614870721266 38 21.994719507154002 27.396223647540435 27.002186870774608 23.606869974530955 39 22.948475191017828 28.041283853159626 26.949848652540904 22.06039230328164 40 22.79646100302695 26.047431093568736 28.203965703465656 22.95214219993866 41 20.654594428813354 27.32188337578174 26.806168575733736 25.21735361967117 42 21.77569906524609 25.2843598735882 28.796687690851147 24.143253370314564 43 23.319509820916622 25.23168829090715 28.69467816996253 22.7541237182137 44 21.506673956235918 25.66606216580214 29.223394183457124 23.60386969450482 45 20.897283746483005 25.624058245436242 28.115624124918327 25.363033883162426 46 23.670209219527155 26.63648607203339 27.424559625565053 22.268745082874403 47 19.392476631152242 26.760497646447 31.21591348525862 22.631112237142133 48 20.412571840038403 25.97809128852026 28.87569506487272 24.733641806568613 49 21.548677876601815 23.986238715613457 30.963889963063217 23.50119344472151 50 21.416332191004493 23.763884629232063 29.86112037123465 24.958662808528796 51 20.291227181203578 24.339605029802783 27.461229714773378 27.90793807422026 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 87.0 1 174.5 2 262.0 3 945.5 4 1629.0 5 1110.0 6 591.0 7 587.0 8 583.0 9 576.0 10 569.0 11 603.5 12 638.0 13 624.0 14 610.0 15 600.5 16 591.0 17 594.5 18 598.0 19 624.5 20 651.0 21 694.5 22 738.0 23 867.0 24 996.0 25 1298.0 26 1816.5 27 2033.0 28 2443.0 29 2853.0 30 3426.5 31 4000.0 32 4729.5 33 5459.0 34 6460.5 35 7462.0 36 8172.5 37 8883.0 38 10083.0 39 11283.0 40 13393.5 41 15504.0 42 17837.5 43 20171.0 44 27606.5 45 35042.0 46 34981.0 47 34920.0 48 34355.5 49 33791.0 50 30058.5 51 26326.0 52 23088.0 53 19850.0 54 17942.0 55 16034.0 56 14743.0 57 13452.0 58 11703.0 59 9954.0 60 8819.5 61 7685.0 62 6726.0 63 5767.0 64 4876.5 65 3986.0 66 3073.0 67 2160.0 68 1614.0 69 1068.0 70 1005.0 71 942.0 72 768.0 73 594.0 74 429.5 75 221.5 76 178.0 77 132.5 78 87.0 79 57.0 80 27.0 81 29.5 82 32.0 83 21.5 84 11.0 85 8.5 86 6.0 87 3.5 88 1.0 89 1.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 299972.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.88981240518512 #Duplication Level Percentage of deduplicated Percentage of total 1 68.62246089750235 24.628472483935106 2 12.084021180602328 8.673865065442023 3 4.431880599405962 4.77178089944578 4 2.4481718242821233 3.5145771003658095 5 1.69423957503863 3.0402970258788486 6 1.2970363503040845 2.793023477707174 7 1.062389705529866 2.6690277062866716 8 0.9401336242746935 2.699297552882043 9 0.8983906209130835 2.901876376603351 >10 6.44077831823096 38.13595152171788 >50 0.05366486927727515 1.3289552428660294 >100 0.01987587751010191 1.5279775256140822 >500 0.0029813816265152867 0.7828923129605301 >1k 0.003975175502020382 2.5320057082946703 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTC 2133 0.7110663661941782 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGC 1886 0.6287253476991186 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCG 1695 0.5650527382555705 No Hit GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 1385 0.46170975957756055 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 935 0.31169575827077195 No Hit CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 644 0.21468670409238197 No Hit CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGCT 616 0.2053524995666262 No Hit GAATGACTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCT 413 0.13767951675489715 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATTAGACGT 396 0.132012321149974 No Hit TCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 368 0.12267811662421826 No Hit GAACTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCT 366 0.12201138772952143 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATTAGACGTCGTA 332 0.11067699651967518 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTC 319 0.10634325870414571 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3336444734841916E-4 0.0 0.0 0.21768698411851772 0.0 2 3.3336444734841916E-4 0.0 0.0 1.1794434147187072 0.0 3 3.3336444734841916E-4 0.0 0.0 1.5464776712493167 0.0 4 3.3336444734841916E-4 0.0 0.0 2.1722027389222993 0.0 5 3.3336444734841916E-4 0.0 0.0 4.180056805301828 0.0 6 3.3336444734841916E-4 0.0 0.0 5.041137172802795 0.0 7 3.3336444734841916E-4 0.0 0.0 5.962889869721174 0.0 8 3.3336444734841916E-4 0.0 0.0 7.468030349499287 0.0 9 3.3336444734841916E-4 0.0 0.0 7.984078513994639 0.0 10 3.3336444734841916E-4 0.0 0.0 9.802581574280266 0.0 11 3.3336444734841916E-4 0.0 0.0 11.504407077993946 0.0 12 3.3336444734841916E-4 0.0 0.0 13.471924046244316 0.0 13 3.3336444734841916E-4 0.0 0.0 14.087981544944196 0.0 14 3.3336444734841916E-4 0.0 0.0 14.312002453562332 0.0 15 3.3336444734841916E-4 0.0 0.0 14.802714920059206 0.0 16 3.3336444734841916E-4 0.0 0.0 15.702132199005241 0.0 17 3.3336444734841916E-4 0.0 0.0 16.76056431933647 0.0 18 3.3336444734841916E-4 0.0 0.0 17.953675676396465 0.0 19 3.3336444734841916E-4 0.0 0.0 18.743749416612218 0.0 20 3.3336444734841916E-4 0.0 0.0 19.39314336004694 0.0 21 3.3336444734841916E-4 0.0 0.0 20.159548224500952 0.0 22 3.3336444734841916E-4 0.0 0.0 20.989959062845866 0.0 23 3.3336444734841916E-4 0.0 0.0 21.847372421425998 0.0 24 3.3336444734841916E-4 0.0 0.0 22.514434680570186 0.0 25 3.3336444734841916E-4 0.0 0.0 23.13382582374355 0.0 26 3.3336444734841916E-4 0.0 0.0 23.68854426413132 0.0 27 3.3336444734841916E-4 0.0 0.0 24.285599989332336 0.0 28 3.3336444734841916E-4 0.0 0.0 24.846652354219728 0.0 29 3.3336444734841916E-4 0.0 0.0 25.44437480831544 0.0 30 3.3336444734841916E-4 0.0 0.0 26.093102022855465 0.0 31 3.3336444734841916E-4 0.0 0.0 26.68715746803035 0.0 32 3.3336444734841916E-4 0.0 0.0 27.263544597495766 0.0 33 3.3336444734841916E-4 0.0 0.0 27.855933220433908 0.0 34 3.3336444734841916E-4 0.0 0.0 28.449321936714092 0.0 35 3.3336444734841916E-4 0.0 0.0 29.023042150600723 0.0 36 3.3336444734841916E-4 0.0 0.0 29.59142853332978 0.0 37 3.3336444734841916E-4 0.0 0.0 30.16214846719027 0.0 38 3.3336444734841916E-4 0.0 0.0 30.736868774418944 0.0 39 3.3336444734841916E-4 0.0 0.0 31.37059458882829 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAT 20 7.024941E-4 45.000004 31 GCGACAG 30 2.160119E-6 45.000004 1 CGCATGG 25 3.88389E-5 45.000004 2 GGCCGTT 20 7.024941E-4 45.000004 13 CGTCTGG 35 1.2079181E-7 45.000004 2 AGGCGAC 25 3.88389E-5 45.000004 9 TAGCACG 25 3.88389E-5 45.000004 1 GCTAGCG 35 1.2079181E-7 45.000004 1 TTACGAG 40 6.7866495E-9 45.000004 1 GGTCTCG 20 7.024941E-4 45.000004 8 CTGGGCG 20 7.024941E-4 45.000004 5 CTAGGCG 20 7.024941E-4 45.000004 1 CCGTTGG 30 2.160119E-6 45.000004 2 TAGTACG 20 7.024941E-4 45.000004 1 ACGGTTA 30 2.160119E-6 45.000004 34 CTAGCGG 50 2.1827873E-11 45.000004 2 GGCGTAG 55 1.8189894E-12 45.0 1 CGTTTTT 595 0.0 43.865547 1 CGTATGG 60 3.6379788E-12 41.250004 2 TAGGGTA 210 0.0 40.714287 5 >>END_MODULE