##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935436.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 466787 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.836107260913437 33.0 31.0 34.0 30.0 34.0 2 31.90423040915878 33.0 31.0 34.0 30.0 34.0 3 31.969960603015938 33.0 31.0 34.0 30.0 34.0 4 35.69067690402689 37.0 35.0 37.0 33.0 37.0 5 35.70310441379044 37.0 35.0 37.0 35.0 37.0 6 35.646673964784796 37.0 35.0 37.0 33.0 37.0 7 35.914809109936655 37.0 35.0 37.0 35.0 37.0 8 35.745282109398936 37.0 35.0 37.0 35.0 37.0 9 37.558631667120125 39.0 37.0 39.0 35.0 39.0 10 36.97404169353474 39.0 37.0 39.0 32.0 39.0 11 36.92864411391063 39.0 37.0 39.0 33.0 39.0 12 36.95068628732162 39.0 37.0 39.0 33.0 39.0 13 36.9032877950757 39.0 37.0 39.0 33.0 39.0 14 37.92736515798426 40.0 37.0 41.0 33.0 41.0 15 38.00988030943449 40.0 37.0 41.0 33.0 41.0 16 37.98829658923663 40.0 37.0 41.0 33.0 41.0 17 37.95713033996234 40.0 37.0 41.0 33.0 41.0 18 37.77188739189395 39.0 37.0 41.0 33.0 41.0 19 37.548337892871906 39.0 37.0 41.0 33.0 41.0 20 37.428366685447536 39.0 35.0 41.0 33.0 41.0 21 37.41310490652053 39.0 35.0 41.0 33.0 41.0 22 37.534226531587215 39.0 35.0 41.0 33.0 41.0 23 37.540490630630245 39.0 35.0 41.0 33.0 41.0 24 37.534269377681895 39.0 35.0 41.0 33.0 41.0 25 37.26457891929295 39.0 35.0 41.0 33.0 41.0 26 37.33607833979952 39.0 35.0 41.0 33.0 41.0 27 37.34128199799909 39.0 35.0 41.0 33.0 41.0 28 37.20607900391399 39.0 35.0 41.0 33.0 41.0 29 37.13309925083603 39.0 35.0 41.0 33.0 41.0 30 36.92109463202703 39.0 35.0 41.0 32.0 41.0 31 36.79566268983498 39.0 35.0 41.0 31.0 41.0 32 36.56656676385589 39.0 35.0 41.0 31.0 41.0 33 36.24885226023861 39.0 35.0 41.0 30.0 41.0 34 35.97057330216994 39.0 35.0 41.0 28.0 41.0 35 35.79334900072195 39.0 35.0 41.0 27.0 41.0 36 35.62049928554137 39.0 35.0 41.0 25.0 41.0 37 35.498784242063294 39.0 35.0 41.0 25.0 41.0 38 35.3787616193253 39.0 35.0 41.0 24.0 41.0 39 35.3127036528438 39.0 35.0 41.0 24.0 41.0 40 35.21239237596591 39.0 35.0 41.0 23.0 41.0 41 35.0560148418872 38.0 35.0 41.0 23.0 41.0 42 35.04414004674509 38.0 35.0 41.0 23.0 41.0 43 35.01985059566783 38.0 35.0 41.0 23.0 41.0 44 34.88075503388055 38.0 34.0 40.0 23.0 41.0 45 34.9087249644913 38.0 34.0 40.0 23.0 41.0 46 34.83043443797706 38.0 34.0 40.0 23.0 41.0 47 34.74196582167027 38.0 34.0 40.0 23.0 41.0 48 34.66170651710523 38.0 34.0 40.0 23.0 41.0 49 34.601719842240676 38.0 34.0 40.0 22.0 41.0 50 34.45517120228284 38.0 34.0 40.0 22.0 41.0 51 33.310752013230875 36.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 11.0 11 3.0 12 14.0 13 11.0 14 18.0 15 16.0 16 41.0 17 86.0 18 178.0 19 357.0 20 653.0 21 1101.0 22 1531.0 23 2274.0 24 3355.0 25 5683.0 26 8491.0 27 9609.0 28 9438.0 29 8998.0 30 9304.0 31 10846.0 32 13507.0 33 18398.0 34 29487.0 35 32781.0 36 36753.0 37 50944.0 38 90241.0 39 122621.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.34666775210107 19.072082127394292 22.435714790686117 18.145535329818525 2 37.077510727590955 25.89746501080793 22.319387643614753 14.705636617986361 3 27.972287145957363 25.185791378080367 31.879208289862397 14.96271318609987 4 25.212141726311998 22.376587180020007 35.53826477601133 16.87300631765666 5 25.30211852515173 26.682833926394693 30.256626684119308 17.75842086433427 6 23.350907373170205 33.03369631116548 30.257269375539593 13.358126940124727 7 72.00607557622641 5.113038709304243 18.603345851533998 4.277539862935343 8 73.62780026007579 6.470188758470137 15.450087513148395 4.451923468305672 9 67.88878010741516 6.552881721213316 17.03410763367446 8.524230537697065 10 36.54557646206943 26.657768961003626 23.339553158078523 13.457101418848424 11 26.421686979286058 23.222797550060307 32.20590976183998 18.149605708813656 12 23.9477534721404 20.195506730050322 36.115401671426156 19.741338126383127 13 23.04777125326969 21.27994138654247 38.086322026963046 17.58596533322479 14 19.00331414542393 26.254801440485704 35.73128643256989 19.01059798152048 15 17.906668351946394 24.887796789542126 39.13905057338786 18.06648428512362 16 21.594217491061233 24.35307752786603 34.213035067386194 19.839669913686542 17 21.38105817000045 24.745761985659414 33.48936452814667 20.38381531619347 18 21.70497464582347 24.35607675449402 34.05171952089497 19.88722907878754 19 21.27501408565363 26.8846390323638 31.850072945476203 19.990273936506373 20 21.85493597722302 26.38998086921872 33.47801031305499 18.27707284050327 21 21.923918189666807 26.412903529875507 34.24838309550181 17.414795184955878 22 20.694449502663957 22.60559955611446 35.35338387744303 21.346567063778554 23 19.992202010767222 25.49471172076343 34.880577222587604 19.63250904588174 24 21.267087558136794 24.918860208189177 33.44823227724851 20.365819956425522 25 21.595074412954947 26.967974686527256 31.338276344456894 20.098674556060903 26 19.758262333783932 24.796963068808687 32.56624541814575 22.878529179261633 27 20.13380835370308 24.75925850548537 33.13459886415003 21.972334276661517 28 19.180054286001965 25.3111162050357 34.07100026350348 21.43782924545885 29 21.836512156508213 24.90664907120378 32.06387495795727 21.192963814330735 30 21.108557007800133 25.55255394858897 32.84003196318663 20.498857080424262 31 22.377872562860578 26.081488987482516 30.406159554572 21.13447889508491 32 22.475775889217136 29.21332427852532 29.359215230929735 18.951684601327802 33 22.01839382844852 27.466703228667466 29.25702729510462 21.257875647779397 34 23.178023381113867 26.928770509889947 30.202426374342046 19.690779734654136 35 21.48645956292699 28.770509889949807 28.77715103462607 20.965879512497136 36 24.040301036661262 28.88276665802604 28.267068277394188 18.809864027918515 37 21.856864051483868 29.17969009419714 28.66168080944842 20.301765044870574 38 21.125481215200935 30.308684689162295 27.915301840025535 20.650532255611232 39 23.056768933153666 27.183490542795752 28.792789859186307 20.966950664864275 40 22.246977743596116 26.96261892469156 30.630458860251036 20.159944471461287 41 22.18442244535516 26.618564784366317 29.956489790846792 21.240522979431734 42 21.280369847489325 27.43713942333441 30.4376514341659 20.84483929501036 43 22.13172174889189 25.64960035305182 29.76561043902251 22.453067459033775 44 21.664699316819018 25.61789424298449 29.88622219556243 22.831184244634063 45 20.92003419118356 25.26055781330671 29.307157225886755 24.512250769622977 46 23.005353619530965 26.433255424851165 28.76901027663581 21.792380678982063 47 20.35146651470585 25.71965371786275 32.202696304738566 21.726183462692834 48 20.36367765169124 26.51916184469576 30.555692425024688 22.561468078588305 49 20.628252286374725 24.939426333638252 32.56538849625204 21.86693288373498 50 20.573623515650606 24.591730275264737 32.70206753829905 22.132578670785605 51 20.111742614940002 24.71169934038437 30.784490570645712 24.39206747402991 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 778.0 1 809.0 2 840.0 3 7115.0 4 13390.0 5 8729.0 6 4068.0 7 3951.0 8 3834.0 9 3841.0 10 3848.0 11 3721.0 12 3594.0 13 3453.0 14 3312.0 15 3177.0 16 3042.0 17 2927.5 18 2813.0 19 2589.5 20 2366.0 21 2405.5 22 2445.0 23 2538.5 24 2632.0 25 3059.0 26 3872.5 27 4259.0 28 5045.0 29 5831.0 30 6698.0 31 7565.0 32 8594.0 33 9623.0 34 11195.0 35 12767.0 36 13718.0 37 14669.0 38 16068.0 39 17467.0 40 18698.5 41 19930.0 42 21583.0 43 23236.0 44 25572.5 45 27909.0 46 38869.5 47 49830.0 48 46228.0 49 42626.0 50 40776.5 51 38927.0 52 33918.0 53 28909.0 54 26621.5 55 24334.0 56 22581.5 57 20829.0 58 19425.5 59 18022.0 60 16490.5 61 14959.0 62 13084.0 63 11209.0 64 9869.5 65 8530.0 66 7287.5 67 6045.0 68 4832.5 69 3620.0 70 2942.0 71 2264.0 72 1829.0 73 1394.0 74 1082.0 75 589.0 76 408.0 77 331.0 78 254.0 79 164.5 80 75.0 81 55.0 82 35.0 83 30.5 84 26.0 85 18.0 86 10.0 87 5.5 88 1.0 89 2.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 466787.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.74940805770661 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8856185747662 28.268877732326224 2 8.011338014023808 6.0484653555920325 3 3.2677113362258132 3.7006250593794587 4 2.047027657448831 3.090963293857887 5 1.5248781874675397 2.8781624468504092 6 1.306174656658852 2.9584392065309895 7 1.04010437882321 2.7484327233163373 8 0.9229371428170565 2.7872264652651926 9 0.8418610534637108 2.860178079158314 >10 6.0778478315242985 35.462163565669044 >50 0.043222050956778994 1.1099220205084377 >100 0.023317159068788635 1.9203583120789094 >500 0.00398097837759806 1.023618606147819 >1k 0.002843555983998614 2.2531202331210904 >5k 0.0011374223935994457 2.8894469001978806 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8312 1.7806836951328981 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC 5147 1.1026442467335207 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC 3168 0.6786821398196607 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCG 3093 0.6626148543125665 No Hit GAACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 1901 0.407252129986482 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 1230 0.26350348231634557 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT 1103 0.2362962121909993 No Hit CGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 952 0.2039474107033829 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT 723 0.1548886322883885 No Hit CGTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 688 0.14739056571841117 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT 670 0.14353441719670856 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 640 0.13710750299387087 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTC 576 0.12339675269448379 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT 519 0.11118561570909215 No Hit CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 486 0.10411601008597068 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAAAGAGT 483 0.10347331866568692 No Hit CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT 469 0.100474092037696 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1423047342792323E-4 0.0 0.0 0.11075715476223631 0.0 2 2.1423047342792323E-4 0.0 0.0 0.5827068877239512 0.0 3 2.1423047342792323E-4 0.0 0.0 0.9556821419619655 0.0 4 2.1423047342792323E-4 0.0 0.0 1.777684468504907 0.0 5 2.1423047342792323E-4 0.0 0.0 3.652843802419519 0.0 6 2.1423047342792323E-4 0.0 0.0 4.879527493267807 0.0 7 2.1423047342792323E-4 0.0 0.0 5.731522086090658 0.0 8 2.1423047342792323E-4 0.0 0.0 6.766041042274099 0.0 9 2.1423047342792323E-4 0.0 0.0 7.280836869921399 0.0 10 2.1423047342792323E-4 0.0 0.0 8.658124583589517 0.0 11 2.1423047342792323E-4 0.0 0.0 9.45527617521482 0.0 12 2.1423047342792323E-4 0.0 0.0 10.771722434429408 0.0 13 2.1423047342792323E-4 0.0 0.0 11.164192661749363 0.0 14 2.1423047342792323E-4 0.0 0.0 11.403273870094926 0.0 15 2.1423047342792323E-4 0.0 0.0 11.683273098865222 0.0 16 2.1423047342792323E-4 0.0 0.0 12.024756473509331 0.0 17 2.1423047342792323E-4 0.0 0.0 12.403730181003327 0.0 18 4.2846094685584647E-4 0.0 0.0 12.849543796206834 0.0 19 4.2846094685584647E-4 0.0 0.0 13.251011703410763 0.0 20 4.2846094685584647E-4 0.0 0.0 13.560360507040684 0.0 21 4.2846094685584647E-4 0.0 0.0 13.89605965890224 0.0 22 4.2846094685584647E-4 0.0 0.0 14.2870302729082 0.0 23 4.2846094685584647E-4 0.0 0.0 14.66471859756163 0.0 24 4.2846094685584647E-4 0.0 0.0 14.959928189945307 0.0 25 4.2846094685584647E-4 0.0 0.0 15.254280860435273 0.0 26 4.2846094685584647E-4 0.0 0.0 15.578625797205149 0.0 27 4.2846094685584647E-4 0.0 0.0 15.91903801948212 0.0 28 4.2846094685584647E-4 0.0 0.0 16.212319537604944 0.0 29 4.2846094685584647E-4 0.0 0.0 16.52059718886773 0.0 30 4.2846094685584647E-4 0.0 0.0 16.920993943704516 0.0 31 4.2846094685584647E-4 0.0 0.0 17.250266181363234 0.0 32 4.2846094685584647E-4 0.0 0.0 17.57675342286739 0.0 33 4.2846094685584647E-4 0.0 0.0 17.92016487177235 0.0 34 4.2846094685584647E-4 0.0 0.0 18.287141672754384 0.0 35 4.2846094685584647E-4 0.0 0.0 18.67532729060578 0.0 36 6.426914202837697E-4 0.0 0.0 19.00524221968478 0.0 37 6.426914202837697E-4 0.0 0.0 19.327659082193804 0.0 38 6.426914202837697E-4 0.0 0.0 19.72312853614175 0.0 39 6.426914202837697E-4 0.0 0.0 20.258062028291278 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 25 3.887233E-5 45.0 21 TACGGGT 25 3.887233E-5 45.0 4 TAGCCGT 25 3.887233E-5 45.0 44 GGACGTA 25 3.887233E-5 45.0 8 TAGTGCG 35 1.2098462E-7 45.0 1 AGTACGG 50 2.1827873E-11 45.0 2 CGGTCTA 65 0.0 44.999996 31 CGTTTTT 4330 0.0 44.012703 1 CGACGGT 75 0.0 42.000004 28 TCACGAC 70 0.0 41.785713 25 ACGGTCT 70 0.0 41.785713 30 CACGGGC 40 3.4523327E-7 39.375 4 GACGGTC 80 0.0 39.375 29 GACGGGT 40 3.4523327E-7 39.375 4 TGTAGCG 40 3.4523327E-7 39.375 1 CACGACG 75 0.0 39.000004 26 CGGGCTT 35 6.240318E-6 38.571426 6 TTGCGCG 35 6.240318E-6 38.571426 14 GCCTAAC 35 6.240318E-6 38.571426 10 TTTACGG 65 9.094947E-12 38.07692 2 >>END_MODULE