##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935432.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 481021 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.535180376740307 31.0 31.0 34.0 30.0 34.0 2 31.598786747356144 31.0 31.0 34.0 30.0 34.0 3 31.720292877026157 31.0 31.0 34.0 30.0 34.0 4 35.50478877221577 37.0 35.0 37.0 33.0 37.0 5 35.49398674901927 37.0 35.0 37.0 33.0 37.0 6 35.39696395791452 37.0 35.0 37.0 33.0 37.0 7 35.68031541242482 37.0 35.0 37.0 35.0 37.0 8 35.35900511620075 37.0 35.0 37.0 33.0 37.0 9 37.200797886162974 39.0 37.0 39.0 34.0 39.0 10 36.59214878352504 39.0 35.0 39.0 32.0 39.0 11 36.63166888763692 39.0 35.0 39.0 32.0 39.0 12 36.64965354942923 39.0 35.0 39.0 32.0 39.0 13 36.520975175719975 39.0 35.0 39.0 32.0 39.0 14 37.488465160564715 39.0 36.0 41.0 32.0 41.0 15 37.45324424505375 39.0 36.0 41.0 32.0 41.0 16 37.612416089942016 39.0 36.0 41.0 33.0 41.0 17 37.39537982749194 39.0 36.0 41.0 32.0 41.0 18 37.40182029474805 39.0 36.0 41.0 32.0 41.0 19 37.267790803312124 39.0 36.0 40.0 32.0 41.0 20 37.16291596416789 39.0 35.0 41.0 32.0 41.0 21 37.23919953598699 39.0 35.0 40.0 32.0 41.0 22 37.38918259285977 39.0 35.0 41.0 32.0 41.0 23 37.357728664652896 39.0 35.0 41.0 32.0 41.0 24 37.31065379681968 39.0 35.0 41.0 32.0 41.0 25 37.174298003621466 39.0 35.0 41.0 32.0 41.0 26 37.19353001220321 39.0 35.0 41.0 32.0 41.0 27 37.187783901326554 39.0 35.0 41.0 32.0 41.0 28 37.02941659511747 39.0 35.0 41.0 31.0 41.0 29 37.04576931152694 39.0 35.0 41.0 31.0 41.0 30 36.94192353348399 39.0 35.0 41.0 31.0 41.0 31 37.04039948359843 39.0 35.0 41.0 31.0 41.0 32 36.87790969625027 39.0 35.0 41.0 31.0 41.0 33 36.752877732988786 39.0 35.0 41.0 31.0 41.0 34 36.687710099974844 39.0 35.0 41.0 31.0 41.0 35 36.64410285621626 39.0 35.0 41.0 31.0 41.0 36 36.638496032397754 39.0 35.0 41.0 31.0 41.0 37 36.543113502321106 39.0 35.0 41.0 30.0 41.0 38 36.560547252614754 39.0 35.0 41.0 30.0 41.0 39 36.38099999792109 39.0 35.0 41.0 30.0 41.0 40 36.299824747776086 39.0 35.0 41.0 30.0 41.0 41 36.049320092054195 39.0 35.0 40.0 29.0 41.0 42 36.195644265011296 39.0 35.0 41.0 30.0 41.0 43 36.21673066248667 39.0 35.0 40.0 30.0 41.0 44 36.17671161965902 39.0 35.0 40.0 30.0 41.0 45 36.14339082909062 39.0 35.0 40.0 30.0 41.0 46 36.044634225948556 39.0 35.0 40.0 30.0 41.0 47 35.866309371108535 38.0 35.0 40.0 29.0 41.0 48 35.813577785585245 38.0 35.0 40.0 29.0 41.0 49 35.821043156120005 38.0 35.0 40.0 29.0 41.0 50 35.705033667968756 38.0 35.0 40.0 28.0 41.0 51 34.460185729936946 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 8.0 11 9.0 12 8.0 13 7.0 14 11.0 15 17.0 16 38.0 17 70.0 18 154.0 19 378.0 20 678.0 21 1161.0 22 1720.0 23 2386.0 24 3108.0 25 3964.0 26 4899.0 27 5804.0 28 6154.0 29 6960.0 30 8629.0 31 11190.0 32 14976.0 33 21204.0 34 32780.0 35 39545.0 36 40652.0 37 56339.0 38 97323.0 39 120795.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.840487213655955 17.549337762800377 22.450786971878568 11.159388051665104 2 27.74348729057567 36.255173890537 21.806532355136262 14.194806463751064 3 25.47456348059648 35.90716413628511 25.154203246843693 13.464069136274714 4 23.670484240812772 21.0564611524237 39.18623095457371 16.08682365218982 5 31.61462805158195 24.872094981300194 24.65609609559666 18.8571808715212 6 20.649826099068438 40.6125720082907 25.90760070766141 12.83000118497945 7 67.76793528764856 5.198317744963318 22.229590807885728 4.804156159502392 8 67.25049426116531 14.875857810781651 11.9406429241135 5.933005003939537 9 63.819874807960566 5.283137326644783 12.156641809817035 18.740346055577614 10 38.76878556237669 24.199775061795638 20.547543662334906 16.483895713492757 11 28.830757908698374 23.80249510936113 26.99923703954713 20.367509942393365 12 22.732063672895777 19.80911436299039 33.10479168269161 24.354030281422226 13 23.449495967951503 21.878878468923393 38.34302452491679 16.328601038208312 14 19.30497836892776 31.379087399510624 28.722030846886103 20.593903384675514 15 15.055683639591619 24.305591647765898 39.62508913332266 21.01363557931982 16 17.85348248829053 25.84460969479503 28.756540774727092 27.545367042187348 17 17.541853682063778 26.39094758856682 32.00920541930602 24.057993310063384 18 17.963249005760662 25.771224125350034 31.198014223911226 25.06751264497808 19 17.623347005640085 28.342629531766804 28.57941753062756 25.454605931965546 20 20.314913486105596 27.234361909355307 33.506437348889136 18.94428725564996 21 19.51952201671029 32.7239351296513 30.11074360578852 17.645799247849887 22 17.289265957203533 22.92436296960008 32.795657570043716 26.99071350315267 23 17.65952006253365 30.40511744809478 31.502366840532947 20.432995648838617 24 21.19720344849809 26.142725577469587 27.607110708264297 25.05296026576802 25 17.862213915816564 34.66231204043066 25.89221676392507 21.5832572798277 26 17.411298051436425 24.45506537136632 30.309903309834706 27.82373326736255 27 20.949605110795577 27.216691163171667 27.73018225815505 24.1035214678777 28 15.067117651828092 25.44712185122895 33.274638737186116 26.21112175975685 29 18.98170765933296 24.04073834614289 28.97586591853578 28.00168807598837 30 17.40630866427869 27.094451177807205 33.31871165707942 22.180528500834683 31 21.33794574457248 24.997869115901388 24.185638464848726 29.478546674677403 32 22.76303945150004 31.06142975046827 24.205180231216517 21.97035056681517 33 18.167813879227726 25.197444602210716 24.278981582924654 32.35575993563691 34 19.93010700156542 27.223551570513553 25.650023595643432 27.196317832277593 35 20.63319480854266 25.645657881880418 27.253487893459955 26.467659416116966 36 18.597316957055927 28.776082541094876 24.62075460322938 28.005845898619814 37 17.10050080973596 28.69916282241316 32.51500454242123 21.68533182542966 38 18.600643215161085 26.314443652148245 23.662376486681456 31.42253664600922 39 19.52534296839431 31.52398751821646 25.90198764710896 23.048681866280265 40 21.229426573891786 23.346589857823254 29.50349361046607 25.920489957818887 41 17.499443891223045 32.25576430135067 25.517596944831933 24.727194862594356 42 21.84935792824014 24.89142885653641 31.188867014122046 22.070346201101408 43 21.09221842705412 26.625448784980282 25.746692971824515 26.53563981614108 44 20.1165853465857 23.534731331896115 30.036942254080383 26.311741067437804 45 19.244482049640244 21.87181017044994 27.95907039401606 30.924637385893757 46 25.914669006134865 26.07495306857705 25.671020599932227 22.339357325355856 47 16.597196380199616 23.78378490751963 36.07493227946389 23.54408643281686 48 19.74653913238715 27.010255269520457 26.627943478559146 26.615262119533245 49 18.820799923496065 21.86453398084491 34.74900264229628 24.565663453362742 50 20.098706709270488 21.24938412252272 31.259342107725026 27.392567060481767 51 18.636400489791505 21.72462324929681 27.906473937728286 31.732502323183397 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2482.0 1 1944.5 2 1407.0 3 3403.0 4 5399.0 5 3370.5 6 1342.0 7 1348.0 8 1354.0 9 1342.0 10 1330.0 11 1345.5 12 1361.0 13 1370.0 14 1379.0 15 1383.5 16 1388.0 17 1376.5 18 1365.0 19 1309.0 20 1253.0 21 1313.0 22 1373.0 23 1708.5 24 2044.0 25 2427.5 26 3192.5 27 3574.0 28 4250.0 29 4926.0 30 5515.0 31 6104.0 32 7042.5 33 7981.0 34 9245.5 35 10510.0 36 12047.5 37 13585.0 38 14574.0 39 15563.0 40 16843.0 41 18123.0 42 20772.0 43 23421.0 44 27250.0 45 31079.0 46 63694.5 47 96310.0 48 74965.0 49 53620.0 50 50705.0 51 47790.0 52 39240.5 53 30691.0 54 26784.0 55 22877.0 56 20942.5 57 19008.0 58 16498.5 59 13989.0 60 12606.0 61 11223.0 62 9707.5 63 8192.0 64 6944.5 65 5697.0 66 4755.0 67 3813.0 68 3089.5 69 2366.0 70 2061.5 71 1757.0 72 1526.5 73 1296.0 74 980.5 75 458.0 76 251.0 77 207.0 78 163.0 79 115.0 80 67.0 81 54.5 82 42.0 83 35.0 84 28.0 85 17.5 86 7.0 87 7.5 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 481021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.185530248531904 #Duplication Level Percentage of deduplicated Percentage of total 1 74.56083483100441 23.997800048090838 2 10.391720486292995 6.689260680917437 3 3.820286684959706 3.6887385797050287 4 1.869045868582155 2.4062492935657813 5 1.1499532725112986 1.850592791840533 6 0.8455220265849241 1.6328144857469447 7 0.6580780770438982 1.4826414298214468 8 0.5777192740155136 1.4875360935188966 9 0.47868012659116427 1.3865916324393899 >10 5.482214199499587 34.86090705446318 >50 0.10241927406432687 2.2102695638289984 >100 0.048616744017876676 2.777962926409582 >500 0.006482232535716889 1.400769289366424 >1k 0.006482232535716889 5.242766081693308 >5k 0.0 0.0 >10k+ 0.001944669760715067 8.88510004859218 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGC 14875 3.0923805821367467 No Hit GAATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTC 14434 3.000700593113398 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCG 13278 2.760378445015914 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 3871 0.8047465703160568 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3617 0.7519422228967134 No Hit GAACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCT 3415 0.7099482143191254 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCT 2884 0.5995580234542774 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTC 2503 0.5203515023252624 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTCACAGATCGTA 2177 0.4525789934327192 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2130 0.44280811024882494 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCACAGAT 2101 0.4367792674332306 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTT 1278 0.26568486614929493 No Hit CTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCT 1153 0.23969847470276767 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTG 942 0.1958334459410296 No Hit CCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 939 0.19520977254631294 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATG 864 0.17961793767839657 No Hit CGTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCT 704 0.14635535662684165 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTCACAGATCGT 571 0.11870583612773662 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 569 0.11829005386459218 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTAT 544 0.11309277557528673 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTT 538 0.11184542878585342 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCC 530 0.11018229973327569 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 513 0.10664815049654795 No Hit TCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 497 0.10332189239139247 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0789113157221827E-4 0.0 0.0 0.2557060918338285 0.0 2 2.0789113157221827E-4 0.0 0.0 1.5138632201088933 0.0 3 2.0789113157221827E-4 0.0 0.0 2.0294332264079946 0.0 4 2.0789113157221827E-4 0.0 0.0 3.3418499400234087 0.0 5 2.0789113157221827E-4 0.0 0.0 7.689892956856354 0.0 6 2.0789113157221827E-4 0.0 0.0 8.960939335288895 0.0 7 2.0789113157221827E-4 0.0 0.0 10.394140796347768 0.0 8 2.0789113157221827E-4 0.0 0.0 12.080137873398458 0.0 9 2.0789113157221827E-4 0.0 0.0 12.493009660700885 0.0 10 2.0789113157221827E-4 0.0 0.0 16.28182553360456 0.0 11 2.0789113157221827E-4 0.0 0.0 17.60214211021972 0.0 12 2.0789113157221827E-4 0.0 0.0 21.95600607873669 0.0 13 4.1578226314443654E-4 0.0 0.0 22.64765987347746 0.0 14 4.1578226314443654E-4 0.0 0.0 22.972593712124834 0.0 15 4.1578226314443654E-4 0.0 0.0 23.745740830441914 0.0 16 6.236733947166548E-4 0.0 0.0 24.485209585444295 0.0 17 6.236733947166548E-4 0.0 0.0 25.292450849339218 0.0 18 6.236733947166548E-4 0.0 0.0 26.189916864336485 0.0 19 6.236733947166548E-4 0.0 0.0 27.230204086723866 0.0 20 6.236733947166548E-4 0.0 0.0 27.832048912625435 0.0 21 6.236733947166548E-4 0.0 0.0 28.486282303683208 0.0 22 6.236733947166548E-4 0.0 0.0 29.28770261589411 0.0 23 6.236733947166548E-4 0.0 0.0 29.981019539687455 0.0 24 6.236733947166548E-4 0.0 0.0 30.599495656114804 0.0 25 6.236733947166548E-4 0.0 0.0 31.099681718677562 0.0 26 6.236733947166548E-4 0.0 0.0 31.642277572081053 0.0 27 6.236733947166548E-4 0.0 0.0 32.27717708790261 0.0 28 6.236733947166548E-4 0.0 0.0 32.77008696086034 0.0 29 6.236733947166548E-4 0.0 0.0 33.322661588579294 0.0 30 6.236733947166548E-4 0.0 0.0 33.88417553495585 0.0 31 6.236733947166548E-4 0.0 0.0 34.452341997542725 0.0 32 6.236733947166548E-4 0.0 0.0 34.903673644186014 0.0 33 6.236733947166548E-4 0.0 0.0 35.402196577696195 0.0 34 6.236733947166548E-4 0.0 0.0 35.907372027416685 0.0 35 6.236733947166548E-4 0.0 0.0 36.4460179493203 0.0 36 6.236733947166548E-4 0.0 0.0 36.92167285835754 0.0 37 6.236733947166548E-4 0.0 0.0 37.38776477534245 0.0 38 6.236733947166548E-4 0.0 0.0 37.85988553514296 0.0 39 6.236733947166548E-4 0.0 0.0 38.455701518228935 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACTTCG 35 1.2099554E-7 45.000004 11 CGGTCTA 95 0.0 45.000004 31 CACAACG 60 0.0 45.000004 12 TCACGAC 100 0.0 45.0 25 CATGCGG 40 6.8012014E-9 45.0 2 CGACGCC 50 2.1827873E-11 45.0 45 CGCATCG 40 6.8012014E-9 45.0 21 AAACGCC 25 3.8874117E-5 45.0 23 ACTACGC 25 3.8874117E-5 45.0 23 TCCGTGC 20 7.0291926E-4 45.0 45 TCTCCGT 20 7.0291926E-4 45.0 43 CCGACTC 25 3.8874117E-5 45.0 27 ATAACGC 45 3.8380676E-10 45.0 11 TAGGCGT 25 3.8874117E-5 45.0 1 CCGAACC 25 3.8874117E-5 45.0 18 ATACGCA 20 7.0291926E-4 45.0 38 CGGTAAT 20 7.0291926E-4 45.0 6 CGCCCTA 25 3.8874117E-5 45.0 26 TTTTACG 20 7.0291926E-4 45.0 1 TGCGTAG 20 7.0291926E-4 45.0 1 >>END_MODULE