##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935428.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 312734 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.830843464413846 33.0 31.0 34.0 30.0 34.0 2 31.89364124143841 33.0 31.0 34.0 30.0 34.0 3 31.98929121873541 33.0 31.0 34.0 30.0 34.0 4 35.70422787416782 37.0 35.0 37.0 33.0 37.0 5 35.712321014024695 37.0 35.0 37.0 35.0 37.0 6 35.65721347854726 37.0 35.0 37.0 33.0 37.0 7 35.917210792558535 37.0 35.0 37.0 35.0 37.0 8 35.699325944732585 37.0 35.0 37.0 35.0 37.0 9 37.550634085197004 39.0 37.0 39.0 35.0 39.0 10 37.018872268445385 39.0 37.0 39.0 33.0 39.0 11 36.897737374254156 39.0 37.0 39.0 33.0 39.0 12 36.97072911803642 39.0 37.0 39.0 33.0 39.0 13 36.94657120747984 39.0 37.0 39.0 33.0 39.0 14 38.08913645462278 40.0 37.0 41.0 33.0 41.0 15 38.12172005602205 40.0 37.0 41.0 33.0 41.0 16 38.13934206066497 40.0 37.0 41.0 33.0 41.0 17 38.05390203815383 40.0 37.0 41.0 33.0 41.0 18 37.95717446775854 39.0 37.0 41.0 33.0 41.0 19 37.79466255667756 39.0 37.0 41.0 33.0 41.0 20 37.71745317106551 39.0 36.0 41.0 33.0 41.0 21 37.76732942372751 39.0 36.0 41.0 33.0 41.0 22 37.8670115817276 40.0 36.0 41.0 33.0 41.0 23 37.83022952413233 40.0 36.0 41.0 33.0 41.0 24 37.84505042624083 40.0 36.0 41.0 33.0 41.0 25 37.63752262305985 39.0 36.0 41.0 33.0 41.0 26 37.63090677700538 39.0 36.0 41.0 33.0 41.0 27 37.629985866583105 40.0 36.0 41.0 33.0 41.0 28 37.53698030914451 40.0 36.0 41.0 33.0 41.0 29 37.506519917885484 40.0 36.0 41.0 33.0 41.0 30 37.41025600030697 39.0 36.0 41.0 33.0 41.0 31 37.38946836608747 40.0 36.0 41.0 33.0 41.0 32 37.247648161057 40.0 36.0 41.0 32.0 41.0 33 37.06920258110727 40.0 35.0 41.0 32.0 41.0 34 36.935545863257595 40.0 35.0 41.0 31.0 41.0 35 36.86402821567211 40.0 35.0 41.0 31.0 41.0 36 36.80536174512525 40.0 35.0 41.0 31.0 41.0 37 36.72817794035826 40.0 35.0 41.0 31.0 41.0 38 36.64025337827035 40.0 35.0 41.0 30.0 41.0 39 36.540168321960515 40.0 35.0 41.0 30.0 41.0 40 36.41917412241713 39.0 35.0 41.0 30.0 41.0 41 36.267441339924666 39.0 35.0 41.0 30.0 41.0 42 36.28904436358055 39.0 35.0 41.0 30.0 41.0 43 36.30026156414077 39.0 35.0 41.0 30.0 41.0 44 36.13177332813189 39.0 35.0 41.0 29.0 41.0 45 36.12338920616243 39.0 35.0 41.0 29.0 41.0 46 35.97036139338863 39.0 35.0 41.0 28.0 41.0 47 35.846198366663046 39.0 35.0 41.0 28.0 41.0 48 35.76235394936272 39.0 35.0 41.0 27.0 41.0 49 35.72607391585181 39.0 35.0 40.0 27.0 41.0 50 35.604302698139634 39.0 35.0 40.0 27.0 41.0 51 34.32728772695006 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 2.0 10 4.0 11 2.0 12 3.0 13 6.0 14 5.0 15 7.0 16 21.0 17 44.0 18 92.0 19 208.0 20 370.0 21 721.0 22 1046.0 23 1300.0 24 1738.0 25 2462.0 26 3356.0 27 4076.0 28 4277.0 29 4496.0 30 5114.0 31 6427.0 32 8159.0 33 10988.0 34 17795.0 35 22973.0 36 23396.0 37 33364.0 38 62462.0 39 97768.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.007264959997954 20.82760428990772 23.8880326411583 13.277098108936029 2 31.147876470099188 30.192112146424755 22.874711416091632 15.785299967384422 3 28.264915231474674 29.014114231263633 28.345814653987095 14.375155883274605 4 25.142453330945784 24.40924235932134 34.08423772279317 16.3640665869397 5 28.21791042867101 28.036286428722175 25.966796063107942 17.77900707949887 6 23.741902063734678 37.664276989390345 25.139575485876176 13.454245460998804 7 74.21195009177129 5.904378801153696 15.559868770264826 4.323802336810196 8 75.4161683731222 9.643339067706101 10.65250340545 4.287989153721694 9 70.06497534646057 7.866429617502415 11.644400672776225 10.42419436326079 10 36.78621448259543 33.76415739893967 17.668369924600462 11.781258193864435 11 26.717274105150064 24.302442331182412 31.025408174359043 17.954875389308487 12 23.943351218607507 21.839006951594648 33.30402194836506 20.913619881432783 13 22.67390178234538 23.42150197931789 36.116316102502445 17.788280135834285 14 18.434196473680508 30.076998343640284 30.994711160283178 20.49409402239603 15 16.311625854560106 27.545134203508415 36.78941208822833 19.353827853703148 16 19.193627811494753 26.551638133365735 32.54906725843688 21.70566679670263 17 19.366938036798047 27.43609585142645 31.2195028362762 21.977463275499307 18 19.38708295228533 27.850825302013853 31.147556709535902 21.61453503616492 19 20.625835374471595 28.44813803423996 29.281434062174245 21.6445925291142 20 23.082555782230266 26.9283160769216 31.756061061477165 18.23306707937097 21 22.03054352900548 29.374164625528405 30.404752921012744 18.19053892445337 22 20.028522642245488 25.005276049294288 31.39377234326936 23.572428965190863 23 19.9562567549419 29.537882033932988 30.845382977226656 19.660478233898456 24 21.035448656046352 26.631258513625 30.131997160526197 22.20129566980245 25 19.98631424789118 31.421271751712315 28.135731963905425 20.456682036491074 26 19.247667346690797 28.377151189189536 30.381090639329273 21.994090824790398 27 21.98513752901827 29.034578907314202 28.622087780669837 20.35819578299769 28 18.196294614592592 29.747964724014658 32.18102285008985 19.874717811302897 29 20.91809652931885 27.936521132975628 30.246151681620802 20.899230656084725 30 21.35233137426695 28.604820710252167 30.14638638587426 19.89646152960663 31 22.349344810605817 28.287298470904986 27.350400020464676 22.012956698024517 32 22.81107906399688 29.9065659634066 28.547263808859924 18.735091163736595 33 21.47352062775394 26.896979541719162 27.267262274009223 24.36223755651768 34 21.743398543170876 28.48970690746769 28.453254203252605 21.313640346108834 35 20.87684741665441 27.665683935868824 28.151080470943356 23.306388176533414 36 20.7857156561167 30.747536244859848 26.067200879981073 22.399547219042383 37 21.511891895348764 28.767578836966877 29.969558794374773 19.750970473309586 38 18.99377745943837 29.848049780324494 26.95869333043417 24.199479429802963 39 22.066676472657274 26.063363753221587 29.506545498730553 22.363414275390586 40 20.794029430762244 26.99130890788977 30.14606662531097 22.068595036037014 41 20.26482569851695 27.827802541456958 28.280903259639185 23.62646850038691 42 19.687018360651546 29.65779224516682 29.15768672418093 21.497502670000703 43 21.32291340244425 27.135201161370365 26.828550781175053 24.71333465501033 44 21.811507543151688 26.55899262632141 29.53820179449628 22.091298036030622 45 20.943037853255483 25.872466696937334 28.52136320323342 24.663132246573767 46 23.085433627299878 28.160993048405352 26.856689710744597 21.896883613550173 47 19.796696233860086 26.22036618979708 32.27503245569717 21.70790512064566 48 20.55261020547814 26.918083738896314 29.031061541118007 23.498244514507537 49 18.69608037501519 25.73049300683648 32.257125864152925 23.31630075399541 50 19.6198686423606 25.165156330939393 30.38428824496217 24.830686781737835 51 19.224644586133902 25.044286838015694 29.41157661143336 26.319491964417047 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1734.0 1 1268.5 2 803.0 3 2871.0 4 4939.0 5 3189.5 6 1440.0 7 1417.5 8 1395.0 9 1361.5 10 1328.0 11 1314.5 12 1301.0 13 1254.0 14 1207.0 15 1170.0 16 1133.0 17 1086.5 18 1040.0 19 1077.0 20 1114.0 21 1188.5 22 1263.0 23 1402.5 24 1542.0 25 1885.0 26 2739.0 27 3250.0 28 3937.0 29 4624.0 30 5457.0 31 6290.0 32 7343.0 33 8396.0 34 9128.0 35 9860.0 36 10747.0 37 11634.0 38 12253.5 39 12873.0 40 14194.0 41 15515.0 42 16904.0 43 18293.0 44 20019.0 45 21745.0 46 31064.0 47 40383.0 48 34843.0 49 29303.0 50 28038.0 51 26773.0 52 22770.0 53 18767.0 54 16357.0 55 13947.0 56 12850.5 57 11754.0 58 11024.0 59 10294.0 60 9981.5 61 9669.0 62 8344.5 63 7020.0 64 5774.5 65 4529.0 66 3458.5 67 2388.0 68 1796.5 69 1205.0 70 977.5 71 750.0 72 615.0 73 480.0 74 384.5 75 205.0 76 121.0 77 100.5 78 80.0 79 52.0 80 24.0 81 16.0 82 8.0 83 4.0 84 0.0 85 0.0 86 0.0 87 1.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 312734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.206427980789364 #Duplication Level Percentage of deduplicated Percentage of total 1 71.36086192894516 23.69639322290571 2 8.80527986498388 5.847837833745639 3 3.5553592446991114 3.5418234211480417 4 2.2949842313213598 3.048329143776799 5 1.7312748037771255 2.874472604329017 6 1.4516653057212732 2.8922771655986423 7 1.21603879453194 2.826621325672954 8 1.1281798251450401 2.997025769044665 9 1.0343311576824556 3.091179878628205 >10 7.324182707804078 38.542278399741946 >50 0.05491140251401846 1.252849487791156 >100 0.028953284961937005 1.7753397743110984 >500 0.00798711309294814 1.8174440042527433 >1k 0.0059903348197111045 5.796127969053395 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGC 4033 1.28959435174941 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCG 3973 1.2704087179519974 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTC 3770 1.2054973236040851 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3131 1.001170323661642 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1467 0.4690887463467356 No Hit GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 1109 0.354614464688841 TruSeq Adapter, Index 21 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 947 0.30281325343582727 TruSeq Adapter, Index 14 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCT 896 0.2865054647080266 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCT 767 0.24525635204358975 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATCGACT 662 0.21168149289811788 No Hit CGTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCT 580 0.18546112670832082 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATCGACTCGTA 576 0.18418208445516 No Hit CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 528 0.16883357741722999 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTC 526 0.16819405629064954 No Hit CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 430 0.13749704221478956 TruSeq Adapter, Index 14 (95% over 23bp) GAATGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTT 427 0.13653776052491895 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTC 315 0.10072457743641561 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.197605632902083E-4 0.0 0.0 0.15604315488562165 0.0 2 3.197605632902083E-4 0.0 0.0 0.8591966335607897 0.0 3 3.197605632902083E-4 0.0 0.0 1.3836039573567314 0.0 4 3.197605632902083E-4 0.0 0.0 2.161261647278518 0.0 5 3.197605632902083E-4 0.0 0.0 4.259210703025574 0.0 6 3.197605632902083E-4 0.0 0.0 5.119046857712944 0.0 7 3.197605632902083E-4 0.0 0.0 5.993272237748374 0.0 8 3.197605632902083E-4 0.0 0.0 6.9647048290240265 0.0 9 3.197605632902083E-4 0.0 0.0 7.30748815287113 0.0 10 3.197605632902083E-4 0.0 0.0 9.253231180492048 0.0 11 3.197605632902083E-4 0.0 0.0 10.126177518274316 0.0 12 6.395211265804166E-4 0.0 0.0 12.23499843317324 0.0 13 6.395211265804166E-4 0.0 0.0 12.644291954184707 0.0 14 6.395211265804166E-4 0.0 0.0 12.84989799638031 0.0 15 6.395211265804166E-4 0.0 0.0 13.255993911758875 0.0 16 6.395211265804166E-4 0.0 0.0 13.700141334168974 0.0 17 6.395211265804166E-4 0.0 0.0 14.234461235426913 0.0 18 6.395211265804166E-4 0.0 0.0 14.824739235260637 0.0 19 6.395211265804166E-4 0.0 0.0 15.450190897056284 0.0 20 6.395211265804166E-4 0.0 0.0 15.852129925112076 0.0 21 6.395211265804166E-4 0.0 0.0 16.2857252489336 0.0 22 6.395211265804166E-4 0.0 0.0 16.81045233329283 0.0 23 6.395211265804166E-4 0.0 0.0 17.292971023297756 0.0 24 9.592816898706249E-4 0.0 0.0 17.6670908823473 0.0 25 9.592816898706249E-4 0.0 0.0 18.002519713238726 0.0 26 9.592816898706249E-4 0.0 0.0 18.347861121592153 0.0 27 9.592816898706249E-4 0.0 0.0 18.702795346844283 0.0 28 9.592816898706249E-4 0.0 0.0 19.031509205906616 0.0 29 9.592816898706249E-4 0.0 0.0 19.417779966361188 0.0 30 9.592816898706249E-4 0.0 0.0 19.840183670467553 0.0 31 9.592816898706249E-4 0.0 0.0 20.243401740776505 0.0 32 9.592816898706249E-4 0.0 0.0 20.59993476884509 0.0 33 9.592816898706249E-4 0.0 0.0 20.95518875466051 0.0 34 9.592816898706249E-4 0.0 0.0 21.325151726387283 0.0 35 9.592816898706249E-4 0.0 0.0 21.70534703613934 0.0 36 9.592816898706249E-4 0.0 0.0 22.100890852929325 0.0 37 0.0012790422531608332 0.0 0.0 22.497074190845893 0.0 38 0.0012790422531608332 0.0 0.0 22.862880275249893 0.0 39 0.0012790422531608332 0.0 0.0 23.23028516247034 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 25 3.8842725E-5 45.0 2 TAACGCG 20 7.025402E-4 45.0 1 TATTGCG 20 7.025402E-4 45.0 1 CGGTCTA 25 3.8842725E-5 45.0 31 ACGTAGG 45 3.8198777E-10 45.0 2 GCTACGA 35 1.2081364E-7 45.0 10 ATACGAG 25 3.8842725E-5 45.0 1 TATCGCG 20 7.025402E-4 45.0 1 TAATGCG 20 7.025402E-4 45.0 1 GTTATCG 20 7.025402E-4 45.0 45 CTAGCGG 35 1.2081364E-7 45.0 2 CGGGTTG 30 2.1604155E-6 44.999996 6 CGGCGAA 30 2.1604155E-6 44.999996 31 TAGATCG 30 2.1604155E-6 44.999996 1 CGTTTTT 1480 0.0 43.47973 1 GGCGACT 75 0.0 42.0 10 CGACTGG 55 6.002665E-11 40.909092 2 ACGGCTG 540 0.0 40.416664 8 TACGGCT 545 0.0 40.045868 7 CAGTGCG 45 1.920671E-8 40.0 1 >>END_MODULE