##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935426.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 325347 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.520425883748736 31.0 31.0 34.0 30.0 34.0 2 31.58778166081138 31.0 31.0 34.0 30.0 34.0 3 31.691225061242303 31.0 31.0 34.0 30.0 34.0 4 35.49364217281856 37.0 35.0 37.0 33.0 37.0 5 35.44956308187873 37.0 35.0 37.0 33.0 37.0 6 35.32786532532957 37.0 35.0 37.0 33.0 37.0 7 35.603119131266006 37.0 35.0 37.0 33.0 37.0 8 35.15845850737828 37.0 35.0 37.0 32.0 37.0 9 36.9786597079426 39.0 37.0 39.0 33.0 39.0 10 36.60160997335153 39.0 35.0 39.0 32.0 39.0 11 36.5419229315162 39.0 35.0 39.0 32.0 39.0 12 36.56803966226828 39.0 35.0 39.0 32.0 39.0 13 36.3214414148586 39.0 35.0 39.0 32.0 39.0 14 37.405566979255994 39.0 36.0 41.0 32.0 41.0 15 37.22306030177011 39.0 36.0 41.0 31.0 41.0 16 37.516642231217745 39.0 36.0 41.0 32.0 41.0 17 37.205497514960946 39.0 36.0 41.0 31.0 41.0 18 37.18819291402718 39.0 36.0 40.0 32.0 41.0 19 37.03332441977335 39.0 35.0 40.0 31.0 41.0 20 36.76401810989498 39.0 35.0 40.0 30.0 41.0 21 37.06582817729993 39.0 35.0 40.0 32.0 41.0 22 37.17688806105481 39.0 35.0 40.0 32.0 41.0 23 37.10416263251236 39.0 35.0 40.0 32.0 41.0 24 37.0265009359238 39.0 35.0 41.0 31.0 41.0 25 36.998549241271625 39.0 35.0 40.0 32.0 41.0 26 36.929659717163524 39.0 35.0 40.0 31.0 41.0 27 36.88427125499851 39.0 35.0 41.0 31.0 41.0 28 36.644597921603705 39.0 35.0 41.0 30.0 41.0 29 36.62264290127157 39.0 35.0 41.0 30.0 41.0 30 36.51957448508823 39.0 35.0 40.0 30.0 41.0 31 36.39390558388428 39.0 35.0 40.0 30.0 41.0 32 36.23106406390715 39.0 35.0 40.0 30.0 41.0 33 36.15785914731041 39.0 35.0 40.0 30.0 41.0 34 36.057553934722 39.0 35.0 41.0 30.0 41.0 35 36.02978973219363 39.0 35.0 41.0 29.0 41.0 36 35.778141492006995 39.0 35.0 40.0 28.0 41.0 37 35.79129052980356 39.0 35.0 40.0 28.0 41.0 38 35.46273056152354 38.0 35.0 40.0 26.0 41.0 39 35.6159147003046 38.0 35.0 40.0 27.0 41.0 40 35.497677863942194 38.0 35.0 40.0 26.0 41.0 41 35.422014034246516 38.0 35.0 40.0 26.0 41.0 42 35.557816731059454 39.0 35.0 40.0 26.0 41.0 43 35.50266638389166 39.0 35.0 40.0 26.0 41.0 44 35.548048698773925 39.0 35.0 40.0 26.0 41.0 45 35.408738977153625 38.0 35.0 40.0 26.0 41.0 46 35.27653551438925 38.0 35.0 40.0 25.0 41.0 47 34.971501197183315 38.0 34.0 40.0 25.0 41.0 48 35.00921477683827 38.0 34.0 40.0 25.0 41.0 49 35.01384060710564 38.0 34.0 40.0 25.0 41.0 50 34.83695254605083 38.0 34.0 40.0 24.0 41.0 51 33.43804000036884 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 5.0 13 7.0 14 9.0 15 19.0 16 26.0 17 72.0 18 169.0 19 299.0 20 783.0 21 1429.0 22 2141.0 23 2697.0 24 2983.0 25 3551.0 26 4243.0 27 4553.0 28 4814.0 29 5247.0 30 6365.0 31 8298.0 32 11329.0 33 15264.0 34 22791.0 35 28109.0 36 26883.0 37 36525.0 38 62101.0 39 74607.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.27495566272319 17.14845995198972 18.552191967345635 12.02439241794146 2 26.303915511745917 42.4488315552318 18.198723209373377 13.048529723648905 3 22.218124033723992 41.327259817978955 24.187713425972884 12.266902722324165 4 21.762610382145834 19.41188945956164 45.167159986107144 13.65834017218539 5 35.90566379895927 22.574359068932555 23.086735085923646 18.433242046184535 6 19.288021712202664 43.25504768754591 25.371372718973895 12.085557881277529 7 61.22755089181704 5.661647410303461 28.200044875164053 4.910756822715439 8 58.4821744168534 20.365025649537262 14.479924511367862 6.672875422241484 9 55.18415722290355 6.745720722797506 13.293806305267914 24.776315749031035 10 38.92059862239394 24.342010222931208 21.370106378727943 15.367284775946914 11 30.51480419367629 19.841584523600954 29.796186840511822 19.847424442210933 12 23.864981081737344 17.690035562030694 32.96295954780588 25.482023808426078 13 23.179559055408532 21.152799933609344 41.04048907781538 14.627151933166743 14 18.868162300559096 32.36790257786302 27.305615235425563 21.458319886152324 15 13.780671098857528 23.74019124196627 42.58837487359649 19.890762785579703 16 15.632540026494791 26.147467165826026 27.758055245630047 30.461937562049137 17 15.713376794622357 27.77434554491051 33.93699649912247 22.575281161344655 18 16.147682320722183 26.425016981868588 31.36528076177128 26.06201993563795 19 15.887959624646916 28.584250046873034 28.51878148561382 27.009008842866233 20 20.58448364361743 26.602673453266817 35.90043860862402 16.91240429449173 21 18.60813224034646 34.844028068493024 29.50972346448561 17.038116226674905 22 15.95588709900506 22.250704632284915 34.20563275518139 27.587775513528634 23 18.835889066135543 31.99476251509926 30.809566401411416 18.35978201735378 24 21.21888322314329 26.14039779066658 26.30053450623488 26.340184479955248 25 16.488241784925016 38.17647004582799 25.19463833998777 20.14064982925922 26 17.713087872333233 23.5779029774364 32.24003909671827 26.4689700535121 27 24.330023021573886 27.58132086664392 25.325575462506183 22.763080649276006 28 15.933756881114626 26.462822770764756 35.71448330551688 21.888937042603743 29 27.55335073014351 22.029095089243178 27.842887747543394 22.574666433069922 30 24.230129676929554 28.8636440477398 30.07496611310386 16.83126016222679 31 23.817339640445432 22.715131843846724 27.650477797551538 25.81705071815631 32 27.317602436782877 32.233277085696194 24.141916169505173 16.30720430801575 33 26.024214146741787 22.791358149913783 23.660891294525538 27.523536408818895 34 26.602058724992084 23.07751416180263 26.381986002637188 23.9384411105681 35 24.359529978761138 23.359367075768333 28.659246896390624 23.621856049079906 36 24.579910065253408 28.65955426052799 28.323297894248295 18.43723777997031 37 22.592186188899852 28.270738626758508 30.942347708754035 18.1947274755876 38 22.186772891712543 25.59021598477933 28.79018401890904 23.432827104599088 39 22.230111235081313 29.091400873528876 25.285003396373718 23.39348449501609 40 23.638453712497736 22.09425628636502 33.656065677568876 20.611224323568376 41 17.45275044798323 30.479457317879067 25.124866680805418 26.942925553332287 42 18.10897288126216 24.035875542113498 38.0021945799408 19.85295699668354 43 23.67779632208073 27.43101980347137 24.53165389568676 24.359529978761138 44 22.485838197370807 22.606939667493474 29.883785619661467 25.023436515474245 45 19.609524599888733 20.59186038291424 29.75930314402776 30.03931187316926 46 29.00165054541766 27.566260023912932 24.472025253037526 18.96006417763188 47 17.34732454886629 22.399776238907997 39.74587133122481 20.5070278810009 48 21.397461786953624 25.459893590535643 27.15869517776405 25.983949444746685 49 18.490104411597464 20.266361761442397 37.85035669608142 23.393177130878723 50 21.524710539823637 20.395147334999248 32.131232192090295 25.948909933086828 51 21.04891085517924 20.156632764402318 27.41472950419091 31.379726876227537 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2738.0 1 1875.5 2 1013.0 3 2672.0 4 4331.0 5 2823.0 6 1315.0 7 1234.0 8 1153.0 9 1136.5 10 1120.0 11 1139.0 12 1158.0 13 1072.5 14 987.0 15 964.5 16 942.0 17 928.5 18 915.0 19 882.0 20 849.0 21 994.0 22 1139.0 23 1293.0 24 1447.0 25 1585.0 26 2198.5 27 2674.0 28 3019.0 29 3364.0 30 3843.0 31 4322.0 32 5216.5 33 6111.0 34 6818.5 35 7526.0 36 7903.0 37 8280.0 38 9180.0 39 10080.0 40 10968.5 41 11857.0 42 13364.0 43 14871.0 44 16875.0 45 18879.0 46 49201.0 47 79523.0 48 56205.0 49 32887.0 50 31019.5 51 29152.0 52 23740.5 53 18329.0 54 16198.5 55 14068.0 56 12813.5 57 11559.0 58 10064.0 59 8569.0 60 7936.5 61 7304.0 62 6386.5 63 5469.0 64 4594.5 65 3720.0 66 3126.0 67 2532.0 68 1969.0 69 1406.0 70 1154.0 71 902.0 72 697.0 73 492.0 74 396.0 75 220.5 76 141.0 77 127.5 78 114.0 79 81.0 80 48.0 81 31.0 82 14.0 83 14.0 84 14.0 85 8.5 86 3.0 87 2.5 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 325347.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.13238868216656 #Duplication Level Percentage of deduplicated Percentage of total 1 76.6198999238731 23.85360505218722 2 8.911790545966934 5.5489065426219994 3 3.051699395962854 2.8502007520874546 4 1.637664679071214 2.039376532796024 5 1.104768141755032 1.7197035596396273 6 0.8508212282332195 1.5892858305836963 7 0.7588405459191839 1.653716317634045 8 0.6318672262811751 1.5737228867286426 9 0.5708800414503922 1.599557340719247 >10 5.739793901860201 32.00670973845739 >50 0.06798571421816602 1.4286764339153835 >100 0.03499264702405604 2.2914849469466345 >500 0.005998739489838178 1.2437888954086869 >1k 0.009997899149730297 7.210925260243506 >5k 0.0 0.0 >10k+ 0.002999369744919089 13.390339910030457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGC 14753 4.534543118578011 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCG 14540 4.469074557318802 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 13727 4.219187513639284 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 3084 0.9479109996403839 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCT 2866 0.8809056176943386 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCT 2786 0.8563164867049642 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2778 0.8538575736060268 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2470 0.7591894192969353 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTC 2269 0.6974092276861321 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGCTAT 2193 0.6740495532462264 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGCTATCGTA 2128 0.6540708843173596 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTG 1409 0.433076069550357 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTT 1184 0.36391913864274145 No Hit CGTCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCT 825 0.2535754133279237 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGC 745 0.2289862823385493 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATG 707 0.21730644511859645 No Hit CTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTCTGCT 639 0.1964056837776282 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTAT 562 0.1727386452003553 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTAGCTATCGT 518 0.1592146231561994 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTT 448 0.13769913354049676 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGTAGCTA 402 0.12356038322160648 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 402 0.12356038322160648 No Hit AATGCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCCGTCTTC 377 0.11587627978742697 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGCTATCGTATGCC 359 0.11034372531481772 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 327 0.10050807291906794 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21423280374492465 0.0 2 0.0 0.0 0.0 1.6526969666233284 0.0 3 0.0 0.0 0.0 2.378383694947241 0.0 4 0.0 0.0 0.0 3.926884219003095 0.0 5 0.0 0.0 0.0 9.486486735700652 0.0 6 0.0 0.0 0.0 10.726701029977225 0.0 7 0.0 0.0 0.0 12.385545279347896 0.0 8 0.0 0.0 0.0 14.005354283272936 0.0 9 0.0 0.0 0.0 14.447343912806941 0.0 10 0.0 0.0 0.0 19.815458571924744 0.0 11 0.0 0.0 0.0 21.04307093656926 0.0 12 0.0 0.0 0.0 26.655232720756608 0.0 13 0.0 0.0 0.0 27.27088308790307 0.0 14 0.0 0.0 0.0 27.602836356259623 0.0 15 0.0 0.0 0.0 28.547058986251603 0.0 16 0.0 0.0 0.0 29.19682677264582 0.0 17 0.0 0.0 0.0 29.902842196178234 0.0 18 0.0 0.0 0.0 30.63467620724949 0.0 19 0.0 0.0 0.0 31.853067647772992 0.0 20 0.0 0.0 0.0 32.399868448149206 0.0 21 0.0 0.0 0.0 32.89103633966196 0.0 22 0.0 0.0 0.0 33.491318499940064 0.0 23 3.0736413736718026E-4 0.0 0.0 34.01045652795323 0.0 24 3.0736413736718026E-4 0.0 0.0 34.436463222344145 0.0 25 3.0736413736718026E-4 0.0 0.0 34.82497149197626 0.0 26 3.0736413736718026E-4 0.0 0.0 35.2067177505863 0.0 27 3.0736413736718026E-4 0.0 0.0 35.69696354968695 0.0 28 3.0736413736718026E-4 0.0 0.0 36.067337335214404 0.0 29 3.0736413736718026E-4 0.0 0.0 36.46875489861594 0.0 30 3.0736413736718026E-4 0.0 0.0 36.90705615850154 0.0 31 3.0736413736718026E-4 0.0 0.0 37.3232272004967 0.0 32 3.0736413736718026E-4 0.0 0.0 37.71911220942563 0.0 33 6.147282747343605E-4 0.0 0.0 38.05997903776583 0.0 34 6.147282747343605E-4 0.0 0.0 38.447872579123214 0.0 35 6.147282747343605E-4 0.0 0.0 38.81640217982646 0.0 36 6.147282747343605E-4 0.0 0.0 39.17017830193608 0.0 37 6.147282747343605E-4 0.0 0.0 39.52118814680941 0.0 38 6.147282747343605E-4 0.0 0.0 39.895250301985264 0.0 39 6.147282747343605E-4 0.0 0.0 40.26408726682588 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTAGG 30 2.1606866E-6 45.000004 31 ACGGCTA 55 1.8189894E-12 45.000004 30 CGGCTAT 55 1.8189894E-12 45.000004 31 TTTTGCG 30 2.1606866E-6 45.000004 1 TGGTATG 30 2.1606866E-6 45.000004 1 ATTTACG 20 7.0258224E-4 45.0 1 GTGCACG 25 3.8846203E-5 45.0 1 CGGAATT 20 7.0258224E-4 45.0 13 TGCTTCG 20 7.0258224E-4 45.0 35 CGACGTT 25 3.8846203E-5 45.0 27 TTTACGG 20 7.0258224E-4 45.0 2 CACGGCC 20 7.0258224E-4 45.0 31 GCGAAGG 50 2.1827873E-11 45.0 2 TCGGGTG 20 7.0258224E-4 45.0 5 CCGCTTC 20 7.0258224E-4 45.0 20 GGATAGT 45 3.8380676E-10 45.0 8 TTCCCGT 20 7.0258224E-4 45.0 24 TCGGAAT 20 7.0258224E-4 45.0 12 GCTTCGC 20 7.0258224E-4 45.0 36 TTGCGAG 20 7.0258224E-4 45.0 1 >>END_MODULE