##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935418.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 658006 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.4964924331997 31.0 31.0 34.0 30.0 34.0 2 31.560453856043864 31.0 31.0 34.0 30.0 34.0 3 31.661819193138058 31.0 31.0 34.0 30.0 34.0 4 35.48521290079422 37.0 35.0 37.0 33.0 37.0 5 35.44821627766312 37.0 35.0 37.0 33.0 37.0 6 35.32753652702255 37.0 35.0 37.0 33.0 37.0 7 35.62280435132811 37.0 35.0 37.0 33.0 37.0 8 35.21012270404829 37.0 35.0 37.0 32.0 37.0 9 37.00435710312672 39.0 37.0 39.0 33.0 39.0 10 36.42849305325483 38.0 35.0 39.0 32.0 39.0 11 36.52510919353319 38.0 35.0 39.0 32.0 39.0 12 36.62281346978599 39.0 35.0 39.0 32.0 39.0 13 36.44956580943031 39.0 35.0 39.0 32.0 39.0 14 37.53837806950089 39.0 36.0 41.0 32.0 41.0 15 37.409585930827376 39.0 36.0 41.0 32.0 41.0 16 37.60093676957353 39.0 36.0 41.0 32.0 41.0 17 37.38732473564071 39.0 36.0 41.0 32.0 41.0 18 37.320921085825965 39.0 36.0 40.0 32.0 41.0 19 37.18421412570706 39.0 36.0 40.0 32.0 41.0 20 36.915788001933116 39.0 35.0 40.0 31.0 41.0 21 37.18089652677939 39.0 35.0 40.0 32.0 41.0 22 37.30244405066215 39.0 35.0 40.0 32.0 41.0 23 37.228798825542626 39.0 35.0 40.0 32.0 41.0 24 37.19079157332912 39.0 35.0 41.0 32.0 41.0 25 37.1110369814257 39.0 35.0 40.0 32.0 41.0 26 37.04808770740692 39.0 35.0 40.0 32.0 41.0 27 37.03879599882068 39.0 35.0 40.0 32.0 41.0 28 36.86059397634672 39.0 35.0 40.0 31.0 41.0 29 36.886311067072334 39.0 35.0 41.0 31.0 41.0 30 36.73477141545822 39.0 35.0 40.0 31.0 41.0 31 36.661194578772836 39.0 35.0 40.0 30.0 41.0 32 36.437436740698416 39.0 35.0 40.0 30.0 41.0 33 36.20487351179169 39.0 35.0 41.0 30.0 41.0 34 35.8292021653298 39.0 35.0 41.0 27.0 41.0 35 35.83768992987906 39.0 35.0 41.0 27.0 41.0 36 35.736180217201664 39.0 35.0 41.0 27.0 41.0 37 35.785343902639184 39.0 35.0 41.0 26.0 41.0 38 35.659595809156755 39.0 35.0 40.0 26.0 41.0 39 35.40865584812297 39.0 35.0 40.0 25.0 41.0 40 35.374458591563 38.0 35.0 40.0 25.0 41.0 41 34.974175007522724 38.0 34.0 40.0 23.0 41.0 42 35.22108309042775 38.0 35.0 40.0 24.0 41.0 43 35.30934976276812 39.0 35.0 40.0 24.0 41.0 44 35.277647924183064 38.0 35.0 40.0 24.0 41.0 45 35.34006528815846 38.0 35.0 40.0 24.0 41.0 46 35.09593985465178 38.0 35.0 40.0 23.0 41.0 47 34.883686470944035 38.0 34.0 40.0 23.0 41.0 48 34.86214107470145 38.0 34.0 40.0 23.0 41.0 49 34.9343151886153 38.0 34.0 40.0 23.0 41.0 50 34.77063431032544 38.0 34.0 40.0 23.0 41.0 51 33.35222171226402 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 3.0 11 5.0 12 7.0 13 7.0 14 8.0 15 26.0 16 28.0 17 98.0 18 228.0 19 577.0 20 1246.0 21 2528.0 22 3900.0 23 5009.0 24 6085.0 25 7757.0 26 9822.0 27 10740.0 28 10729.0 29 11153.0 30 13563.0 31 17095.0 32 22380.0 33 29157.0 34 42690.0 35 50095.0 36 54662.0 37 77288.0 38 131784.0 39 149292.0 40 36.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.91077285009559 16.697720081579803 19.388121080962787 12.003385987361817 2 28.759160250818383 38.06591429257484 19.260006747658835 13.914918708947944 3 23.335805448582537 38.09858876666778 25.489585201350746 13.076020583398936 4 21.637948590134435 19.641614210204768 43.15112628152327 15.569310918137525 5 32.88374270143433 23.005109375902347 25.445056732005483 18.666091190657834 6 19.991003121552083 39.77699291495822 27.935307580781938 12.296696382707756 7 64.66065658975754 4.440840964976004 26.17802877177412 4.720473673492339 8 62.06675926967231 15.965811861897915 15.459889423500698 6.5075394449290735 9 57.4262240769841 5.897818560924977 15.007157989440826 21.668799372650096 10 37.238870162278154 20.328082114752753 25.099923101005157 17.333124621963933 11 29.435141928797005 20.80315377063431 29.03772913924797 20.723975161320716 12 21.895089102530978 18.147250936921548 34.334033428266615 25.623626532280863 13 22.63338024273335 20.820630814916584 41.18077950656985 15.365209435780223 14 19.22277304462269 31.47934821263028 29.07146743342766 20.226411309319367 15 15.017948164606402 23.855861496703678 41.71816062467516 19.408029714014766 16 16.6024321966669 25.490041124245067 28.94654456038395 28.960982118704088 17 17.34437072002383 26.59185478551867 33.47720233554101 22.586572158916486 18 17.42598091810713 25.57149934803026 31.802293596107027 25.200226137755582 19 17.236620942666175 27.919046330884523 28.66843159484868 26.175901131600625 20 19.795868122783077 26.66571429439853 35.78599587237806 17.75242171044033 21 18.271413938474726 32.70942818150594 31.274638833080548 17.74451904693878 22 16.77203551335398 21.94356890362702 33.92081531171448 27.363580271304517 23 18.94815548794388 29.440461029230736 31.995148980404437 19.61623450242095 24 21.533694221633237 24.90433217934183 28.072844320568507 25.489129278456428 25 16.61215855174573 36.396780576468906 26.160855676088058 20.830205195697303 26 16.62902769883557 23.65145606575016 33.80212338489314 25.91739285052112 27 23.151308650680996 26.253408023635043 26.6196660820722 23.97561724361176 28 15.282687391908281 26.127421330504585 35.078403540393246 23.511487737193885 29 19.849818998610953 20.448141810257052 33.882061865697274 25.819977325434724 30 16.127208566487237 28.968276885013207 29.895168129165995 25.00934641933356 31 19.124597648045764 28.18424148108072 24.923936863797593 27.767224007075924 32 21.396461430442884 28.27785764871445 24.58579405051018 25.73988687033249 33 17.279173746136053 23.818171870773213 23.40708139439458 35.49557298869615 34 18.543143983489514 29.15672501466552 28.33773552216849 23.962395479676477 35 16.011708099926143 27.73880481332997 24.872113628143207 31.377373458600683 36 16.130400026747477 29.74015434509716 27.56205870463187 26.567386923523493 37 15.094391236554076 25.87711966152284 29.603985373993552 29.424503727929537 38 16.481308681075856 29.011741534271724 23.106628207037623 31.400321577614793 39 20.158782746661885 26.314653665772042 25.886542068005458 27.64002151956061 40 16.985711376492006 27.15370376561916 29.25216487387653 26.608419984012304 41 16.00988440834886 31.04637343732428 24.857828044121177 28.085914110205685 42 17.029176025750527 27.47771296918265 32.34165038008772 23.1514606249791 43 20.779293805831557 22.50465801223697 25.91602508183816 30.80002310009331 44 19.860761148074637 22.811342145816297 28.745938486883098 28.581958219225967 45 17.548776150977346 22.373504192970888 27.788348434512756 32.289371221539014 46 25.48077069206056 26.213742731829193 24.971504819104993 23.333981757005258 47 15.630556560274526 22.922283383434195 37.50588900405163 23.941271052239646 48 19.272772588699798 26.15006550092248 26.29231344395036 28.28484846642736 49 17.04741294152333 21.180050029938936 35.86228697002763 25.910250058510105 50 19.41228499436175 20.32169919423227 31.533147114160055 28.732868697245923 51 18.510621483694678 20.637349811399897 27.750962757178506 33.10106594772692 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 251.0 1 405.0 2 559.0 3 4527.5 4 8496.0 5 5806.5 6 3117.0 7 3002.5 8 2888.0 9 2948.5 10 3009.0 11 3036.5 12 3064.0 13 2967.0 14 2870.0 15 2791.5 16 2713.0 17 2541.0 18 2369.0 19 2412.5 20 2456.0 21 2412.0 22 2368.0 23 2467.5 24 2567.0 25 2808.5 26 3564.5 27 4079.0 28 5058.0 29 6037.0 30 7238.0 31 8439.0 32 9385.5 33 10332.0 34 12007.0 35 13682.0 36 15017.0 37 16352.0 38 18127.5 39 19903.0 40 22498.5 41 25094.0 42 28618.0 43 32142.0 44 36808.5 45 41475.0 46 95354.5 47 149234.0 48 111442.5 49 73651.0 50 69495.5 51 65340.0 52 53243.5 53 41147.0 54 35542.0 55 29937.0 56 26728.5 57 23520.0 58 20511.0 59 17502.0 60 15354.0 61 13206.0 62 11602.5 63 9999.0 64 8560.0 65 7121.0 66 5639.0 67 4157.0 68 3210.5 69 2264.0 70 1891.0 71 1518.0 72 1260.5 73 1003.0 74 733.5 75 438.5 76 413.0 77 264.0 78 115.0 79 89.5 80 64.0 81 39.0 82 14.0 83 12.5 84 11.0 85 9.5 86 8.0 87 5.5 88 3.0 89 2.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 658006.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.759327383769566 #Duplication Level Percentage of deduplicated Percentage of total 1 76.74065431033509 28.20934835438294 2 9.482703052319193 6.971555719665442 3 3.5822987690829686 3.9504867971758673 4 1.9407483697258772 2.853624187690823 5 1.3105009610619058 2.408656693220962 6 0.9459997065912539 2.0864587751722707 7 0.7707431191381539 1.9832399051630973 8 0.5953438946687675 1.7507552904046118 9 0.5209121667644904 1.72335427886562 >10 4.002597547262954 26.38670474524241 >50 0.06987376699115917 1.795831111312347 >100 0.027287979998270557 1.8487211943035604 >500 0.004547996666378426 1.2410931661199336 >1k 0.00330763393918431 3.3471215769604825 >5k 0.0012403627271941162 2.7154802350067175 >10k+ 0.0012403627271941162 10.72756796931293 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 27128 4.122758759038671 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCG 21932 3.3331003060762363 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGC 21524 3.271094792448701 No Hit GAACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCT 6718 1.0209633346808389 RNA PCR Primer, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 6048 0.919140554949347 RNA PCR Primer, Index 14 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5101 0.775220894642298 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCT 4538 0.6896593648082237 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTC 3653 0.5551621109837904 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTT 3557 0.5405725783655468 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCACCAACT 3447 0.5238554055738093 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCACCAACTCGTA 3073 0.467017018081902 No Hit CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 1324 0.20121397069327637 RNA PCR Primer, Index 16 (95% over 24bp) CGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1291 0.1961988188557551 RNA PCR Primer, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 1140 0.1732506998416428 RNA PCR Primer, Index 16 (95% over 23bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATG 989 0.15030258082753045 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTT 923 0.14027227715248797 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTAT 869 0.13206566505472594 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCACCAACTCGT 821 0.12477089874560414 No Hit CGTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCT 755 0.11474059507056167 RNA PCR Primer, Index 16 (95% over 21bp) CGTTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCT 721 0.10957346893493372 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCACCCACTCGTATGC 717 0.10896557174250691 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 680 0.10334252271255884 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCACCAAC 669 0.10167080543338511 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.59871490533521E-4 0.0 0.0 0.22401011540928198 0.0 2 7.59871490533521E-4 0.0 0.0 1.5794688802229766 0.0 3 7.59871490533521E-4 0.0 0.0 2.0913183162463564 0.0 4 7.59871490533521E-4 0.0 0.0 3.7017899532831007 0.0 5 7.59871490533521E-4 0.0 0.0 9.32879031498193 0.0 6 7.59871490533521E-4 0.0 0.0 10.939261952018674 0.0 7 7.59871490533521E-4 0.0 0.0 12.517515037856798 0.0 8 7.59871490533521E-4 0.0 0.0 14.233456837779595 0.0 9 7.59871490533521E-4 0.0 0.0 14.734668072935506 0.0 10 7.59871490533521E-4 0.0 0.0 19.260614644851263 0.0 11 7.59871490533521E-4 0.0 0.0 20.612122077914183 0.0 12 7.59871490533521E-4 0.0 0.0 25.197186651793448 0.0 13 7.59871490533521E-4 0.0 0.0 25.857211028470864 0.0 14 7.59871490533521E-4 0.0 0.0 26.19444199596964 0.0 15 9.118457886402252E-4 0.0 0.0 27.00294526189731 0.0 16 9.118457886402252E-4 0.0 0.0 27.765400315498642 0.0 17 9.118457886402252E-4 0.0 0.0 28.622079433926135 0.0 18 9.118457886402252E-4 0.0 0.0 29.482557909806292 0.0 19 9.118457886402252E-4 0.0 0.0 30.657927131363543 0.0 20 9.118457886402252E-4 0.0 0.0 31.26628024668468 0.0 21 9.118457886402252E-4 0.0 0.0 31.897885429616142 0.0 22 9.118457886402252E-4 0.0 0.0 32.69179916292557 0.0 23 9.118457886402252E-4 0.0 0.0 33.40015136640091 0.0 24 9.118457886402252E-4 0.0 0.0 33.94361145643049 0.0 25 9.118457886402252E-4 0.0 0.0 34.470506347966435 0.0 26 9.118457886402252E-4 0.0 0.0 34.97840445223904 0.0 27 9.118457886402252E-4 0.0 0.0 35.56593708871956 0.0 28 0.0010638200867469293 0.0 0.0 36.08204180508992 0.0 29 0.0010638200867469293 0.0 0.0 36.58842016638146 0.0 30 0.0010638200867469293 0.0 0.0 37.17276134260174 0.0 31 0.0010638200867469293 0.0 0.0 37.707406923341125 0.0 32 0.0010638200867469293 0.0 0.0 38.21287343884402 0.0 33 0.0010638200867469293 0.0 0.0 38.7336893584557 0.0 34 0.0012157943848536336 0.0 0.0 39.21772749792555 0.0 35 0.0012157943848536336 0.0 0.0 39.73292036850728 0.0 36 0.0012157943848536336 0.0 0.0 40.21361507341879 0.0 37 0.0012157943848536336 0.0 0.0 40.69734926429242 0.0 38 0.0012157943848536336 0.0 0.0 41.162542590797045 0.0 39 0.0012157943848536336 0.0 0.0 41.63579055510132 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCC 35 1.2108649E-7 45.000004 34 TATTGCG 35 1.2108649E-7 45.000004 1 ACGATAG 65 0.0 45.000004 1 GGTGCGT 30 2.1640808E-6 45.000004 9 CTCGATC 30 2.1640808E-6 45.000004 16 ATACCGC 60 0.0 45.000004 28 TGATCCG 20 7.031085E-4 45.0 4 ACGCCTA 20 7.031085E-4 45.0 30 GCGTTAG 20 7.031085E-4 45.0 1 CGCCTAT 20 7.031085E-4 45.0 31 GCGATTC 20 7.031085E-4 45.0 9 GAGCACG 40 6.8066583E-9 45.0 1 ATACGGA 40 6.8066583E-9 45.0 28 ACGGTCA 20 7.031085E-4 45.0 30 ACCGCCG 25 3.8889826E-5 44.999996 39 ATATGCG 25 3.8889826E-5 44.999996 1 CTCGCGG 25 3.8889826E-5 44.999996 2 CGTTTTT 3335 0.0 43.583206 1 CGATGAA 1360 0.0 43.014706 19 TACGGCT 2705 0.0 42.587803 7 >>END_MODULE