##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935414.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 560582 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936291211633623 33.0 31.0 34.0 30.0 34.0 2 31.986740566054564 33.0 31.0 34.0 30.0 34.0 3 32.05258106753338 33.0 31.0 34.0 30.0 34.0 4 35.771394729049454 37.0 35.0 37.0 35.0 37.0 5 35.78722648961258 37.0 35.0 37.0 35.0 37.0 6 35.74888241149377 37.0 35.0 37.0 35.0 37.0 7 36.0282902412136 37.0 35.0 37.0 35.0 37.0 8 35.90326838892437 37.0 35.0 37.0 35.0 37.0 9 37.72554059887759 39.0 38.0 39.0 35.0 39.0 10 37.05055281832096 39.0 37.0 39.0 33.0 39.0 11 36.97560570978019 39.0 37.0 39.0 33.0 39.0 12 37.00994145370347 39.0 37.0 39.0 33.0 39.0 13 36.953113014688306 39.0 37.0 39.0 33.0 39.0 14 37.934578705702286 40.0 37.0 41.0 33.0 41.0 15 38.10161046911959 40.0 37.0 41.0 33.0 41.0 16 38.047727183534256 40.0 37.0 41.0 33.0 41.0 17 38.08828324848104 40.0 37.0 41.0 33.0 41.0 18 38.010050269184525 40.0 37.0 41.0 33.0 41.0 19 37.8841115126779 40.0 37.0 41.0 33.0 41.0 20 37.907101904806076 40.0 36.0 41.0 33.0 41.0 21 37.84944397073042 40.0 36.0 41.0 33.0 41.0 22 37.964513666154104 40.0 36.0 41.0 34.0 41.0 23 37.994013364681706 40.0 36.0 41.0 34.0 41.0 24 37.96881812116693 40.0 36.0 41.0 34.0 41.0 25 37.730030575366314 39.0 36.0 41.0 33.0 41.0 26 37.81625703286941 40.0 36.0 41.0 34.0 41.0 27 37.82829630633877 40.0 36.0 41.0 34.0 41.0 28 37.718865393466075 40.0 36.0 41.0 33.0 41.0 29 37.68429061225655 40.0 36.0 41.0 33.0 41.0 30 37.545798830501155 40.0 36.0 41.0 33.0 41.0 31 37.52969770702591 40.0 36.0 41.0 33.0 41.0 32 37.48997648872065 40.0 36.0 41.0 33.0 41.0 33 37.37345294711567 40.0 36.0 41.0 33.0 41.0 34 37.29775126564891 40.0 36.0 41.0 33.0 41.0 35 37.218000221198686 40.0 36.0 41.0 32.0 41.0 36 37.13012369287633 40.0 35.0 41.0 32.0 41.0 37 37.06237981240925 40.0 35.0 41.0 32.0 41.0 38 36.977987163340956 40.0 35.0 41.0 31.0 41.0 39 36.920536157065335 40.0 35.0 41.0 31.0 41.0 40 36.82810900100253 40.0 35.0 41.0 31.0 41.0 41 36.68352355230814 39.0 35.0 41.0 31.0 41.0 42 36.71289481289089 39.0 35.0 41.0 31.0 41.0 43 36.64916461820037 39.0 35.0 41.0 31.0 41.0 44 36.538658037539555 39.0 35.0 41.0 31.0 41.0 45 36.51320948585577 39.0 35.0 41.0 31.0 41.0 46 36.44853919676336 39.0 35.0 41.0 31.0 41.0 47 36.38983413666511 39.0 35.0 41.0 31.0 41.0 48 36.29999001038207 39.0 35.0 41.0 30.0 41.0 49 36.21520847975854 39.0 35.0 41.0 30.0 41.0 50 36.100508043426295 39.0 35.0 41.0 30.0 41.0 51 34.92467114534537 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 3.0 9 4.0 10 5.0 11 4.0 12 11.0 13 16.0 14 15.0 15 29.0 16 37.0 17 84.0 18 140.0 19 279.0 20 494.0 21 726.0 22 1076.0 23 1653.0 24 2408.0 25 3627.0 26 5105.0 27 5996.0 28 6534.0 29 7242.0 30 8354.0 31 10469.0 32 13637.0 33 19865.0 34 34933.0 35 39010.0 36 40846.0 37 61391.0 38 115520.0 39 180997.0 40 70.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.04391864169738 21.181200966138764 25.670285524686843 13.104594867477015 2 32.58060372969521 24.7052170779654 26.105369062866806 16.608810129472584 3 30.757676842995313 24.54395610276463 28.90513787456608 15.79322917967398 4 27.312150586354893 25.22610429874666 29.162905694438994 18.29883942045945 5 25.137446439593138 29.38588823758166 27.174436567709986 18.30222875511522 6 25.475487974997414 34.09456600461663 26.193313377882273 14.236632642503682 7 80.23001095290252 5.431141206817201 10.11841264971048 4.2204351905698 8 82.70226300523385 4.8328344470568085 8.744661797917166 3.72024074979218 9 76.81142098747374 6.724261571010129 10.47393601649714 5.990381425018998 10 38.71565622870517 31.440716969149918 17.161271678362844 12.682355123782068 11 28.124163815463216 25.153857954768437 28.356600818435123 18.365377411333224 12 25.905041546107437 22.040486494393328 32.25665469101755 19.797817268481683 13 24.947643698870102 23.05336239836456 33.244021392053256 18.754972510712083 14 20.46266201911585 26.891516316970577 32.59112850573154 20.054693158182033 15 19.384853598581476 25.610347817090094 35.82294829302404 19.181850291304396 16 23.459369012918714 25.849385103339028 30.86024881284094 19.83099707090131 17 23.714639428308438 25.20202218408725 29.82971269145281 21.2536256961515 18 24.26371164254293 24.5386045217292 30.899315354399537 20.298368481328332 19 24.060708335265847 26.65676029554998 28.970783935267274 20.311747433916892 20 23.7066120567553 27.77452718781552 29.089589034253688 19.429271721175493 21 23.750851793314805 26.535101020011346 31.19008459065757 18.523962596016283 22 22.42027036187391 24.16274514700793 31.090366797364165 22.32661769375399 23 21.28858935891627 26.23041767306121 30.951939234581204 21.529053733441316 24 21.413637969110674 25.90736056455612 31.004384728728358 21.674616737604847 25 22.43115190997927 27.626823551237823 28.887834429218206 21.0541901095647 26 21.189049951657385 26.68512367503773 29.290273323082083 22.835553050222803 27 20.907378403159573 26.645165203306565 30.305825017571024 22.141631375962838 28 20.31406645236558 26.42699908309578 30.95086891837412 22.30806554616452 29 21.278242968914448 25.721303930557887 31.065571138566707 21.93488196196096 30 22.186763042694913 26.543485163633505 30.754287508339544 20.51546428533203 31 23.78849124659729 26.68994009796961 28.747979778159127 20.773588877273976 32 24.220363836155993 26.757905177119497 28.138791470293373 20.882939516431136 33 23.405318044460934 26.1153586807996 28.645764580382533 21.833558694356935 34 23.060319453710605 25.440167540163618 30.462091183805402 21.037421822320372 35 22.004630901455986 27.420787681373998 28.99879054268599 21.575790874484017 36 23.689843769510972 28.095265277871928 28.45292927707276 19.761961675544345 37 22.60918117242437 28.62721243279306 27.991444605784704 20.772161788997863 38 22.64575030949977 27.471984473279555 28.24439600272574 21.637869214494938 39 22.500722463439782 26.212400683575282 28.45061025862407 22.83626659436086 40 24.206984883567433 24.42229682722599 30.181846723583703 21.188871565622872 41 22.359975882208133 26.440199649649827 28.2047943030636 22.995030165078436 42 21.951115091101748 26.680842410209387 29.467945813458158 21.900096685230707 43 21.59362947793543 26.26110007099764 29.750509292128534 22.39476115893839 44 22.182481777866574 25.71327655900475 28.946701820607867 23.15753984252081 45 21.217234945110615 25.404311947226276 29.08245359287312 24.295999514789987 46 22.562087259312644 25.63871119657784 29.103146372876758 22.696055171232754 47 20.99585787627858 26.21311422771334 30.734843430577506 22.05618446543057 48 21.305714418229627 26.583443635364674 29.46081037207759 22.650031574328107 49 22.402431758422498 25.421437006539634 30.33097744843752 21.845153786600356 50 21.093613423192327 25.478520537584153 30.14402888426671 23.283837154956814 51 21.437898469804594 25.094455405275234 28.795965621443433 24.671680503476743 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 212.0 1 442.0 2 672.0 3 3205.5 4 5739.0 5 3835.5 6 1932.0 7 1898.0 8 1864.0 9 1806.0 10 1748.0 11 1793.0 12 1838.0 13 1780.5 14 1723.0 15 1730.0 16 1737.0 17 1723.0 18 1709.0 19 1641.0 20 1573.0 21 1810.5 22 2048.0 23 2383.0 24 2718.0 25 3174.0 26 4833.5 27 6037.0 28 6990.5 29 7944.0 30 9458.0 31 10972.0 32 11843.5 33 12715.0 34 14963.0 35 17211.0 36 18853.5 37 20496.0 38 21959.5 39 23423.0 40 25287.5 41 27152.0 42 30272.5 43 33393.0 44 35933.0 45 38473.0 46 45085.0 47 51697.0 48 51870.5 49 52044.0 50 50489.0 51 48934.0 52 43884.0 53 38834.0 54 34883.5 55 30933.0 56 29147.0 57 27361.0 58 25279.5 59 23198.0 60 20719.0 61 18240.0 62 16059.0 63 13878.0 64 11819.0 65 9760.0 66 8397.5 67 7035.0 68 5680.5 69 4326.0 70 3734.5 71 3143.0 72 2519.0 73 1895.0 74 1503.5 75 817.5 76 523.0 77 432.0 78 341.0 79 260.5 80 180.0 81 127.5 82 75.0 83 61.5 84 48.0 85 37.5 86 27.0 87 20.0 88 13.0 89 8.5 90 4.0 91 5.5 92 7.0 93 11.0 94 15.0 95 7.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 560582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.60114592943061 #Duplication Level Percentage of deduplicated Percentage of total 1 73.19312751063538 24.593729585162816 2 8.328567239189988 5.596988063741955 3 3.1927480364896934 3.2183997806997966 4 1.8925168110513282 2.5436293416814535 5 1.3974324284738735 2.3477665477834613 6 1.186229667220628 2.391520569246014 7 1.0088746013091379 2.372953989215912 8 0.8654467284081826 2.3264001452313314 9 0.8244957275693178 2.493360113422384 >10 8.043911347715278 47.782600276454154 >50 0.04212273802429537 0.9787567969959529 >100 0.02026157018889938 1.3501576463776117 >500 0.001599597646492056 0.38304631740383943 >1k 0.00266599607748676 1.6206908265833166 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3439 0.613469572694093 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTC 1774 0.31645682522806656 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCG 1417 0.25277301090652216 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGC 1408 0.25116753659589497 No Hit GCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 1008 0.179813122790243 No Hit CCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGC 829 0.14788202261221373 No Hit CGCTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTG 710 0.12665408450503227 No Hit CTGTCTCTTATACACATCTGACGCTAGCTGGATCGTATGCCGTCTTCTGCT 599 0.10685323467396383 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.351581035423898E-4 0.0 0.0 0.11630769450321274 0.0 2 5.351581035423898E-4 0.0 0.0 0.5588834461327692 0.0 3 5.351581035423898E-4 0.0 0.0 0.8575016679094227 0.0 4 5.351581035423898E-4 0.0 0.0 1.2251552850430445 0.0 5 5.351581035423898E-4 0.0 0.0 2.277276116607383 0.0 6 5.351581035423898E-4 0.0 0.0 3.0081237000117733 0.0 7 7.135441380565199E-4 0.0 0.0 3.656913707539664 0.0 8 7.135441380565199E-4 0.0 0.0 4.575958557356461 0.0 9 7.135441380565199E-4 0.0 0.0 4.994630580361124 0.0 10 7.135441380565199E-4 0.0 0.0 5.998587182606648 0.0 11 7.135441380565199E-4 0.0 0.0 6.907820800525169 0.0 12 7.135441380565199E-4 0.0 0.0 7.88965753449094 0.0 13 7.135441380565199E-4 0.0 0.0 8.245537673346629 0.0 14 7.135441380565199E-4 0.0 0.0 8.417145038549222 0.0 15 7.135441380565199E-4 0.0 0.0 8.647619795141479 0.0 16 7.135441380565199E-4 0.0 0.0 9.054339953833693 0.0 17 7.135441380565199E-4 0.0 0.0 9.569697207545016 0.0 18 7.135441380565199E-4 0.0 0.0 10.176031338858543 0.0 19 7.135441380565199E-4 0.0 0.0 10.573118651686997 0.0 20 7.135441380565199E-4 0.0 0.0 10.937918092268392 0.0 21 7.135441380565199E-4 0.0 0.0 11.363725556653621 0.0 22 8.919301725706498E-4 0.0 0.0 11.830918581046127 0.0 23 8.919301725706498E-4 0.0 0.0 12.301144168025374 0.0 24 8.919301725706498E-4 0.0 0.0 12.666300380675798 0.0 25 8.919301725706498E-4 0.0 0.0 12.990249419353457 0.0 26 8.919301725706498E-4 0.0 0.0 13.312771369755005 0.0 27 8.919301725706498E-4 0.0 0.0 13.684706251716966 0.0 28 8.919301725706498E-4 0.0 0.0 14.023818103328326 0.0 29 8.919301725706498E-4 0.0 0.0 14.394325897014175 0.0 30 8.919301725706498E-4 0.0 0.0 14.859913447096053 0.0 31 8.919301725706498E-4 0.0 0.0 15.215436813882715 0.0 32 8.919301725706498E-4 0.0 0.0 15.574884673428686 0.0 33 8.919301725706498E-4 0.0 0.0 15.953063066598641 0.0 34 8.919301725706498E-4 0.0 0.0 16.34818813304744 0.0 35 8.919301725706498E-4 0.0 0.0 16.75241088725646 0.0 36 8.919301725706498E-4 0.0 0.0 17.128091875943216 0.0 37 8.919301725706498E-4 0.0 0.0 17.498599669629066 0.0 38 0.0010703162070847796 0.0 0.0 17.91530944625407 0.0 39 0.0012487022415989097 0.0 0.0 18.505945606530357 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGCAT 30 2.1635042E-6 45.000004 9 AACCGAT 20 7.030192E-4 45.0 16 ATTAGCG 20 7.030192E-4 45.0 1 CGTTTTT 1765 0.0 41.81303 1 CGTAAGG 60 3.6379788E-12 41.250004 2 ACGTAAG 40 3.453988E-7 39.375 1 TGCGACG 35 6.2425624E-6 38.57143 1 ATAGCGG 130 0.0 38.076927 2 CCCTAGC 210 0.0 37.500004 21 TCGACAC 30 1.1391759E-4 37.500004 37 AATCGAG 30 1.1391759E-4 37.500004 1 TAGTACG 30 1.1391759E-4 37.500004 1 TAGGGCG 145 0.0 37.24138 5 TAGGGAC 505 0.0 36.980198 5 CGAGGGT 80 0.0 36.5625 4 TACAGCG 75 1.8189894E-12 36.000004 1 GTACGAG 75 1.8189894E-12 36.000004 1 CTCACGA 25 0.00210619 36.0 24 AAATCGG 25 0.00210619 36.0 2 ACACGGT 25 0.00210619 36.0 32 >>END_MODULE