##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935412.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 599161 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.69759547100028 31.0 31.0 34.0 30.0 34.0 2 31.760898990421605 33.0 31.0 34.0 30.0 34.0 3 31.849616380238366 33.0 31.0 34.0 30.0 34.0 4 35.60925026829183 37.0 35.0 37.0 33.0 37.0 5 35.62486710583633 37.0 35.0 37.0 33.0 37.0 6 35.5630439898458 37.0 35.0 37.0 33.0 37.0 7 35.855773323030036 37.0 35.0 37.0 35.0 37.0 8 35.642106211852905 37.0 35.0 37.0 33.0 37.0 9 37.44732551017172 39.0 37.0 39.0 34.0 39.0 10 36.82455133094444 39.0 37.0 39.0 32.0 39.0 11 36.79486648830615 39.0 35.0 39.0 32.0 39.0 12 36.87682275715542 39.0 35.0 39.0 33.0 39.0 13 36.838048537872126 39.0 37.0 39.0 33.0 39.0 14 37.896815713973375 40.0 37.0 41.0 33.0 41.0 15 37.92410887891568 40.0 37.0 41.0 33.0 41.0 16 37.91409821400258 40.0 37.0 41.0 33.0 41.0 17 37.868010434591035 40.0 37.0 41.0 33.0 41.0 18 37.76170177965522 39.0 37.0 41.0 33.0 41.0 19 37.61704783856092 39.0 36.0 41.0 33.0 41.0 20 37.57940353260643 39.0 36.0 41.0 33.0 41.0 21 37.63132613771591 39.0 36.0 41.0 33.0 41.0 22 37.75083491749296 39.0 36.0 41.0 33.0 41.0 23 37.72290252536464 39.0 36.0 41.0 33.0 41.0 24 37.72714178659826 39.0 36.0 41.0 33.0 41.0 25 37.50702065054301 39.0 35.0 41.0 33.0 41.0 26 37.51804940575238 39.0 35.0 41.0 33.0 41.0 27 37.54494868658007 39.0 36.0 41.0 33.0 41.0 28 37.42548330081564 39.0 36.0 41.0 33.0 41.0 29 37.38088093183635 39.0 35.0 41.0 33.0 41.0 30 37.28083770472377 39.0 35.0 41.0 32.0 41.0 31 37.233731835015966 39.0 35.0 41.0 32.0 41.0 32 37.12030322400824 39.0 35.0 41.0 32.0 41.0 33 36.91462394915557 39.0 35.0 41.0 31.0 41.0 34 36.755272789784385 39.0 35.0 41.0 31.0 41.0 35 36.69695457481378 39.0 35.0 41.0 31.0 41.0 36 36.45635647179974 39.0 35.0 41.0 30.0 41.0 37 36.47652968067014 39.0 35.0 41.0 30.0 41.0 38 36.39618399728954 39.0 35.0 41.0 30.0 41.0 39 36.36238673745454 39.0 35.0 41.0 30.0 41.0 40 36.32694050513969 39.0 35.0 41.0 30.0 41.0 41 36.09301506606739 39.0 35.0 41.0 29.0 41.0 42 36.16877266711285 39.0 35.0 41.0 30.0 41.0 43 36.04505466811091 39.0 35.0 41.0 29.0 41.0 44 35.97314912018639 39.0 35.0 40.0 29.0 41.0 45 36.032313518403235 39.0 35.0 40.0 29.0 41.0 46 35.92267020049703 39.0 35.0 40.0 29.0 41.0 47 35.836663267469014 39.0 35.0 40.0 28.0 41.0 48 35.75105522555707 39.0 35.0 40.0 28.0 41.0 49 35.7075460518959 39.0 35.0 40.0 28.0 41.0 50 35.56415387516878 38.0 35.0 40.0 27.0 41.0 51 34.3480566992845 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 1.0 11 6.0 12 11.0 13 10.0 14 14.0 15 14.0 16 34.0 17 85.0 18 160.0 19 339.0 20 670.0 21 1213.0 22 1769.0 23 2362.0 24 3310.0 25 5012.0 26 6974.0 27 7991.0 28 8103.0 29 8802.0 30 9852.0 31 12744.0 32 16642.0 33 22694.0 34 36915.0 35 44790.0 36 48645.0 37 71574.0 38 129151.0 39 159229.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.432232738779724 19.90449979220944 24.158615130157003 12.50465233885383 2 31.90661608482528 29.359053743484637 23.586481763666193 15.147848408023886 3 28.469309584569093 28.167888096855435 28.618518227988805 14.744284090586671 4 24.94070875774625 23.672101488581536 34.79064892407884 16.59654082959338 5 27.47408459495862 26.72403577669441 27.575893624585046 18.225986003761925 6 23.52589704603604 35.663703078137594 26.86723601836568 13.943163857460682 7 73.86679039523601 4.940408337658826 16.616401935372963 4.576399331732206 8 73.98846053064202 8.777440454235172 12.132799030644518 5.101299984478295 9 68.63914707399181 6.992778234898466 13.228164049395739 11.139910641713998 10 36.81097401199344 28.718491357080982 20.366145326548292 14.104389304377287 11 27.47141419418153 23.979197577946497 29.97424732250597 18.575140905366002 12 24.166292532391125 20.794577751222125 33.85934665306988 21.17978306331687 13 23.195101149774437 23.51454784273342 36.27038475468196 17.01996625281018 14 20.01665662484708 29.14158298020065 30.94193380410274 19.899826590849536 15 17.626981729451682 25.38149178601411 37.961416046772065 19.030110437762136 16 19.702216933345127 26.542448523852517 31.490367363696905 22.26496717910545 17 21.100672440295682 26.076630488299475 31.154731366026827 21.66796570537802 18 21.35436051411891 25.511506923848515 31.72335983149771 21.410772730534863 19 20.844814665841067 28.227471414194184 29.17546369005993 21.752250229904817 20 22.13678794180529 27.36576646343804 32.39329662644932 18.10414896830735 21 21.359033715478812 29.380583849749904 31.092477647910993 18.16790478686029 22 20.43090254539264 24.12606962068626 31.901275283271108 23.541752550649992 23 19.66032502115458 28.52939360205354 30.97297721313637 20.837304163655514 24 21.133885549960695 24.934700355997805 30.673892326102663 23.257521767938837 25 19.332366425718632 30.40768674863684 28.85685149734379 21.403095328300743 26 18.98421292440596 27.515809607100593 30.43105275543635 23.06892471305709 27 22.07753842456368 27.387797269849006 28.40939246713321 22.125271838454104 28 18.240673208035904 28.304078536486855 32.03596362246542 21.419284633011827 29 21.376391320529876 26.737387780579848 30.033663739796147 21.852557159094133 30 23.64306088013072 27.859123007004793 29.434826365534473 19.06298974733002 31 23.987375680326323 28.131336986219065 26.77510719155619 21.10618014189842 32 24.536977540260462 28.276039328327446 28.511702196905343 18.675280934506752 33 24.439174111799666 25.630506658477437 27.93022242769473 22.000096802028168 34 24.739427299173343 27.314361248479123 28.177568299672373 19.768643152675157 35 25.371310883051468 25.26382725177373 28.422410670921504 20.942451194253298 36 23.451292724326184 29.655468229741256 28.41590156902736 18.477337476905205 37 23.955998471195556 26.356021169602162 31.53376137632456 18.154218982877723 38 23.031205302080743 27.917204223906428 27.64248674396364 21.409103730049186 39 24.90048584604138 24.62376556551578 30.514836579817445 19.960912008625396 40 27.382122668197695 23.414074013495537 29.34603553969634 19.857767778610423 41 23.453295524909 25.848144321809997 28.752038266843133 21.94652188643787 42 23.605675269251503 24.969749366197068 30.586102900555943 20.838472463995487 43 22.84661384836463 24.998623074599315 29.715886047322837 22.43887702971322 44 22.96978608420775 24.922516652452344 29.106367069952814 23.001330193387087 45 21.827355251760377 23.63454897765375 28.71298365547824 25.825112115107622 46 25.244967546285558 26.151401710057897 27.648328245663517 20.955302497993028 47 21.301786998820017 24.527964937637798 32.80670804675204 21.363540016790143 48 22.411004721602374 24.66999687896909 29.790490369032696 23.128508030395835 49 21.801151944135217 22.4191828239822 33.15703124869609 22.62263398318649 50 21.83286295336312 22.69857350528489 31.658602612653358 23.809960928698633 51 21.758258631653263 22.62647268430355 28.459963181849286 27.1553055021939 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 194.0 1 361.5 2 529.0 3 3731.5 4 6934.0 5 4767.5 6 2601.0 7 2531.5 8 2462.0 9 2535.5 10 2609.0 11 2645.5 12 2682.0 13 2555.0 14 2428.0 15 2393.0 16 2358.0 17 2308.5 18 2259.0 19 2205.0 20 2151.0 21 2185.5 22 2220.0 23 2416.5 24 2613.0 25 3023.5 26 3928.0 27 4422.0 28 5266.5 29 6111.0 30 7605.5 31 9100.0 32 10598.5 33 12097.0 34 14154.5 35 16212.0 36 17344.5 37 18477.0 38 20217.5 39 21958.0 40 24685.0 41 27412.0 42 30991.5 43 34571.0 44 38946.0 45 43321.0 46 65501.0 47 87681.0 48 77461.0 49 67241.0 50 63224.5 51 59208.0 52 50228.0 53 41248.0 54 35454.0 55 29660.0 56 26833.0 57 24006.0 58 21306.0 59 18606.0 60 16769.0 61 14932.0 62 12693.0 63 10454.0 64 8681.5 65 6909.0 66 5735.5 67 4562.0 68 3454.0 69 2346.0 70 1955.5 71 1565.0 72 1076.5 73 588.0 74 536.5 75 377.5 76 270.0 77 185.5 78 101.0 79 90.0 80 79.0 81 58.5 82 38.0 83 25.0 84 12.0 85 10.5 86 9.0 87 4.5 88 0.0 89 1.5 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 599161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.328211333932835 #Duplication Level Percentage of deduplicated Percentage of total 1 75.42991631152651 29.66523689600582 2 9.432961697831479 7.419630223144205 3 3.57998002469931 4.223826329478976 4 2.0791506325902556 3.2707710189435883 5 1.4276307240303578 2.8073081410740732 6 1.031551234825688 2.434143897900242 7 0.8782075235157019 2.417683175591272 8 0.7367238756510202 2.31792258210859 9 0.617005320243969 2.1839144065844147 >10 4.689406471507632 31.66782089598271 >50 0.061714395723298426 1.6408983422485572 >100 0.026813840891105688 1.6989817575530988 >500 0.002979315654567299 0.7704840423661984 >1k 0.004681781742891469 3.368335951452316 >5k 0.0012768495662431282 4.113042339565984 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG 8341 1.3921133051049717 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC 8139 1.358399495294253 No Hit GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 8092 1.3505551930115611 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4126 0.6886296003912137 No Hit GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 3047 0.5085444479864343 No Hit GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT 2083 0.3476528011669651 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTT 1576 0.2630344765430327 No Hit CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 1489 0.24851417231762413 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT 1427 0.23816636930641347 No Hit CGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTG 1361 0.2271509661009311 No Hit CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT 1285 0.21446656240976966 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA 1267 0.21146236153554723 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATGGGTT 1247 0.2081243605641889 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC 1215 0.20278355901001566 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTT 858 0.14320024167127032 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT 677 0.11299133288047787 No Hit CGTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT 666 0.11115543234623082 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC 645 0.10765053132630462 No Hit TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC 634 0.10581463079205755 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCC 618 0.10314423001497094 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.345002428395707E-4 0.0 0.0 0.23399386809221562 0.0 2 8.345002428395707E-4 0.0 0.0 1.248078563190862 0.0 3 8.345002428395707E-4 0.0 0.0 1.799850123756386 0.0 4 8.345002428395707E-4 0.0 0.0 2.7032800866545053 0.0 5 8.345002428395707E-4 0.0 0.0 5.352317657524439 0.0 6 8.345002428395707E-4 0.0 0.0 6.6808420441250345 0.0 7 8.345002428395707E-4 0.0 0.0 7.836124180312137 0.0 8 8.345002428395707E-4 0.0 0.0 9.303175607224102 0.0 9 8.345002428395707E-4 0.0 0.0 9.87948147492911 0.0 10 0.001001400291407485 0.0 0.0 12.41102141160723 0.0 11 0.001001400291407485 0.0 0.0 13.908281747309989 0.0 12 0.001001400291407485 0.0 0.0 16.47670659472162 0.0 13 0.001001400291407485 0.0 0.0 17.07671226932327 0.0 14 0.001001400291407485 0.0 0.0 17.36645075363717 0.0 15 0.001001400291407485 0.0 0.0 17.937248919739435 0.0 16 0.001001400291407485 0.0 0.0 18.63155312178196 0.0 17 0.001001400291407485 0.0 0.0 19.54599848788556 0.0 18 0.001001400291407485 0.0 0.0 20.514352569676596 0.0 19 0.001001400291407485 0.0 0.0 21.345848611641944 0.0 20 0.001001400291407485 0.0 0.0 21.956535889351944 0.0 21 0.001001400291407485 0.0 0.0 22.62580508410928 0.0 22 0.001168300339975399 0.0 0.0 23.4179127146126 0.0 23 0.001168300339975399 0.0 0.0 24.18782263865639 0.0 24 0.001168300339975399 0.0 0.0 24.766798907138483 0.0 25 0.001168300339975399 0.0 0.0 25.29336856037025 0.0 26 0.001168300339975399 0.0 0.0 25.819771313553453 0.0 27 0.001168300339975399 0.0 0.0 26.37221047431325 0.0 28 0.001168300339975399 0.0 0.0 26.910296230896204 0.0 29 0.001168300339975399 0.0 0.0 27.4538896890819 0.0 30 0.001168300339975399 0.0 0.0 28.119320182722173 0.0 31 0.001168300339975399 0.0 0.0 28.694123949990068 0.0 32 0.001168300339975399 0.0 0.0 29.263586915703794 0.0 33 0.001168300339975399 0.0 0.0 29.793160769809784 0.0 34 0.001168300339975399 0.0 0.0 30.33124652639274 0.0 35 0.0013352003885433131 0.0 0.0 30.881015286375447 0.0 36 0.0013352003885433131 0.0 0.0 31.40758493960722 0.0 37 0.0013352003885433131 0.0 0.0 31.94099749483027 0.0 38 0.0013352003885433131 0.0 0.0 32.48459095301597 0.0 39 0.0013352003885433131 0.0 0.0 33.05989542042957 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 25 3.8885617E-5 45.000004 1 CACCGCT 25 3.8885617E-5 45.000004 16 ATCGCTA 25 3.8885617E-5 45.000004 12 TCACGAC 40 6.8048394E-9 45.0 25 TCGTTGA 20 7.03058E-4 45.0 24 CGCCTGG 20 7.03058E-4 45.0 12 CCACGCT 20 7.03058E-4 45.0 38 GCATCGA 20 7.03058E-4 45.0 9 TCTACGG 30 2.1637552E-6 44.999996 2 CGTTTTT 2910 0.0 43.45361 1 TAGGGCG 230 0.0 41.08696 5 GCTACGA 105 0.0 40.714283 10 GCGATAT 50 1.0804797E-9 40.500004 9 TGGGCGA 265 0.0 39.905663 6 TACGGCT 920 0.0 39.619568 7 TACGAAT 110 0.0 38.863636 12 CGAATAT 110 0.0 38.863636 14 GTGTACG 35 6.2432828E-6 38.571426 1 ACGGCTG 970 0.0 37.57732 8 CCGGGAT 90 0.0 37.5 5 >>END_MODULE