##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935408.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 348519 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.65173778187129 31.0 31.0 34.0 30.0 34.0 2 31.704678941463737 31.0 31.0 34.0 30.0 34.0 3 31.787274151480982 33.0 31.0 34.0 30.0 34.0 4 35.54315259713244 37.0 35.0 37.0 33.0 37.0 5 35.57726838422008 37.0 35.0 37.0 33.0 37.0 6 35.53921880873066 37.0 35.0 37.0 33.0 37.0 7 35.821725644799855 37.0 35.0 37.0 35.0 37.0 8 35.67474657048827 37.0 35.0 37.0 35.0 37.0 9 37.46225026469145 39.0 37.0 39.0 35.0 39.0 10 36.546633038657866 39.0 35.0 39.0 32.0 39.0 11 36.668807152551224 39.0 35.0 39.0 32.0 39.0 12 36.81484510170177 39.0 35.0 39.0 33.0 39.0 13 36.81602150815307 39.0 37.0 39.0 33.0 39.0 14 37.80808506853285 39.0 37.0 41.0 33.0 41.0 15 37.93462910200018 40.0 37.0 41.0 33.0 41.0 16 37.87903385468224 39.0 37.0 41.0 33.0 41.0 17 37.86578923961104 39.0 37.0 41.0 33.0 41.0 18 37.78600018937274 39.0 37.0 41.0 33.0 41.0 19 37.64577540966203 39.0 36.0 41.0 33.0 41.0 20 37.66542713596676 39.0 36.0 41.0 33.0 41.0 21 37.62638191891977 39.0 36.0 41.0 33.0 41.0 22 37.74895773257699 39.0 36.0 41.0 33.0 41.0 23 37.76093986267607 39.0 36.0 41.0 33.0 41.0 24 37.76456089911884 39.0 36.0 41.0 33.0 41.0 25 37.46804047985906 39.0 36.0 41.0 33.0 41.0 26 37.5936692117216 39.0 36.0 41.0 33.0 41.0 27 37.59962871464683 39.0 36.0 41.0 33.0 41.0 28 37.40313727515573 39.0 36.0 41.0 33.0 41.0 29 37.32145449745925 39.0 36.0 41.0 32.0 41.0 30 37.18851196061047 39.0 36.0 41.0 32.0 41.0 31 37.224989168452794 39.0 36.0 41.0 32.0 41.0 32 37.202953067121165 39.0 36.0 41.0 32.0 41.0 33 37.01304376518927 39.0 36.0 41.0 31.0 41.0 34 36.930919117752545 40.0 36.0 41.0 31.0 41.0 35 36.87786892536705 40.0 36.0 41.0 31.0 41.0 36 36.76169448437531 39.0 35.0 41.0 31.0 41.0 37 36.67403785733346 39.0 35.0 41.0 30.0 41.0 38 36.56594332016332 39.0 35.0 41.0 30.0 41.0 39 36.480794447361546 39.0 35.0 41.0 30.0 41.0 40 36.413004742926496 39.0 35.0 41.0 30.0 41.0 41 36.25955543313277 39.0 35.0 41.0 29.0 41.0 42 36.307650372002676 39.0 35.0 41.0 30.0 41.0 43 36.21892350201854 39.0 35.0 41.0 29.0 41.0 44 36.12364892588352 39.0 35.0 41.0 29.0 41.0 45 36.13069301817118 39.0 35.0 41.0 29.0 41.0 46 35.960974867941204 39.0 35.0 40.0 28.0 41.0 47 35.908145610425834 39.0 35.0 40.0 28.0 41.0 48 35.81108347034164 39.0 35.0 40.0 28.0 41.0 49 35.65953649585819 39.0 35.0 40.0 27.0 41.0 50 35.51748685150594 39.0 35.0 40.0 26.0 41.0 51 34.19499080394469 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 3.0 11 7.0 12 6.0 13 7.0 14 8.0 15 17.0 16 21.0 17 50.0 18 88.0 19 196.0 20 328.0 21 587.0 22 952.0 23 1294.0 24 1998.0 25 2892.0 26 4209.0 27 4674.0 28 4816.0 29 5133.0 30 5991.0 31 7419.0 32 9676.0 33 12768.0 34 20780.0 35 25225.0 36 27839.0 37 41442.0 38 76233.0 39 93830.0 40 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.02703152482361 21.846441657413227 25.60979458795647 11.516732229806696 2 32.42606572381994 26.347200583038514 25.005523371753046 16.221210321388504 3 29.289364424895055 25.358158378739752 29.54214834772279 15.8103288486424 4 25.57679782163957 24.94584226397987 31.997394690102976 17.479965224277585 5 25.45370553685739 28.69054484834399 27.878824396948232 17.97692521785039 6 23.32067979077181 35.68585930752699 27.058209165067044 13.935251736634157 7 77.33150846869181 5.4166343872213565 12.809344684220946 4.44251245986589 8 78.55812739047225 6.184454792995504 10.3130675802467 4.94435023628554 9 72.67839056120326 7.296015425270933 12.167772775659289 7.857821237866515 10 35.60953635239399 27.340833641781366 21.73826964957434 15.311360356250306 11 26.58420344371469 27.39276768268014 27.16207724686459 18.86095162674058 12 22.908937532817436 22.073975880798464 34.389516783876914 20.627569802507182 13 23.73299590553169 24.68330277545844 35.12491428013968 16.45878703887019 14 19.87237424645428 29.91458141449964 31.32827765487678 18.8847666841693 15 18.313779162685535 26.781897113213336 37.0447522229778 17.859571501123327 16 20.92712305498409 26.957210367297048 31.07176366281322 21.043902914905644 17 21.35034244904869 26.266573701864175 29.895357211515012 22.487726637572127 18 23.600721911861335 25.046554133347104 30.985972070389277 20.366751884402284 19 22.6509888987401 28.252405177336097 28.56745256356181 20.529153360361992 20 21.969247013792646 27.580418858082346 30.60234879590496 19.84798533222005 21 21.87742992491084 28.751086741325437 30.915387683311383 18.45609565045234 22 20.021577015887225 26.04678654535334 30.29160533572058 23.640031103038858 23 18.69109001230923 27.844679917020304 30.178268616632092 23.28596145403837 24 20.33002504884956 26.303874394222408 30.003529219353897 23.362571337574135 25 19.378857393714547 29.516898648280293 28.21252212935306 22.891721828652095 26 18.855786915490977 27.980970908329244 29.639130147854203 23.524112028325572 27 20.507059873349803 27.081163437287493 30.517991845494798 21.89378484386791 28 19.248018042057964 25.84564973502162 32.83493869774675 22.07139352517366 29 19.76735845104571 24.728637463093833 31.699563008042603 23.804441077817852 30 20.49787816446162 25.785681698845686 32.6223247513048 21.094115385387884 31 20.559567771054088 26.90986718084236 30.07583517684832 22.454729871255225 32 22.088322300936248 27.297220524562505 29.440288764744533 21.174168409756714 33 20.57190569237258 25.484980732757755 31.464568646185718 22.478544928683945 34 20.311087774267687 25.15329149917221 30.480691153136558 24.054929573423543 35 20.801448414577113 25.977349871886467 29.538418278486965 23.68278343504945 36 20.55095991897142 26.6126093555875 31.314505091544508 21.521925633896576 37 20.00263974130535 27.594191421414614 31.210350081344203 21.19281875593583 38 20.9606936781065 26.972130644240345 30.072392036015255 21.994783641637902 39 22.717843216582168 25.396606784709014 29.03858900088661 22.84696099782221 40 22.6535712543649 24.24602388965881 30.39260413349057 22.707800722485718 41 19.829334986040934 25.864300081200735 28.518674735093352 25.787690197664975 42 21.64903491631733 26.275755410752353 29.856334948740244 22.218874724190073 43 20.99799437046474 26.347774439844024 30.027918133588127 22.62631305610311 44 20.57276647758085 25.083854825705345 29.792636843328484 24.550741853385325 45 20.38626301578967 24.244876176047793 29.015634728666157 26.353226079496384 46 22.212275370926694 25.397754498320037 28.74620895847859 23.643761172274683 47 19.23137619469814 24.94785076279916 32.11187912280249 23.708893919700216 48 20.666018208476437 24.700231551221023 30.2015098172553 24.432240423047237 49 21.239014228779492 22.91783231330286 32.403972236807746 23.439181221109898 50 20.460864400506143 22.846100212613944 31.942017508371134 24.751017878508776 51 20.37363816606842 22.879096978930846 28.86270188999739 27.88456296500334 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 208.0 2 296.0 3 1631.5 4 2967.0 5 2086.0 6 1205.0 7 1235.0 8 1265.0 9 1255.5 10 1246.0 11 1293.0 12 1340.0 13 1356.0 14 1372.0 15 1290.0 16 1208.0 17 1197.5 18 1187.0 19 1195.0 20 1203.0 21 1164.0 22 1125.0 23 1306.0 24 1487.0 25 1727.5 26 2351.5 27 2735.0 28 3263.5 29 3792.0 30 4911.5 31 6031.0 32 6651.0 33 7271.0 34 8328.0 35 9385.0 36 10437.5 37 11490.0 38 12622.0 39 13754.0 40 15560.5 41 17367.0 42 19849.0 43 22331.0 44 25285.5 45 28240.0 46 35991.0 47 43742.0 48 42453.0 49 41164.0 50 39414.0 51 37664.0 52 31557.5 53 25451.0 54 21324.0 55 17197.0 56 15074.0 57 12951.0 58 11616.0 59 10281.0 60 8972.0 61 7663.0 62 6316.5 63 4970.0 64 3974.0 65 2978.0 66 2373.5 67 1769.0 68 1353.5 69 938.0 70 750.5 71 563.0 72 504.5 73 446.0 74 310.0 75 133.0 76 92.0 77 70.5 78 49.0 79 29.5 80 10.0 81 16.5 82 23.0 83 13.0 84 3.0 85 3.5 86 4.0 87 2.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 348519.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.65606667653125 #Duplication Level Percentage of deduplicated Percentage of total 1 77.22534888595249 36.8025637562734 2 9.291108939512448 8.855554142406415 3 3.5840367257462877 5.124032795199055 4 2.1086451346783432 4.019589325414974 5 1.473164202792475 3.5102605736878596 6 1.0144826865833998 2.900775273240304 7 0.8090143776944057 2.6988110187973926 8 0.6365493138417394 2.4268349234673723 9 0.5552725853980409 2.3815896618041044 >10 3.2372081854366686 24.637248974020302 >50 0.04344597490915961 1.4202809811925141 >100 0.01568882427275208 1.5652134805893614 >500 0.0030170815909138613 0.9630534533334136 >1k 0.0030170815909138613 2.69419164057353 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC 2364 0.6782987441143812 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC 2029 0.582177729191235 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG 1983 0.5689790226644745 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1679 0.48175278822675377 No Hit GCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 1314 0.37702392122093775 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTT 856 0.24561071275884527 No Hit CCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 753 0.21605708727501227 No Hit CTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGCT 717 0.20572766477580848 Illumina Single End Adapter 2 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCT 512 0.14690734221089813 No Hit CGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTG 511 0.14662041380814245 No Hit TCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTCTGC 478 0.13715177651720567 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCT 405 0.11620600311604247 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTC 358 0.10272036818652641 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.607852082669811E-4 0.0 0.0 0.23040350741279528 0.0 2 8.607852082669811E-4 0.0 0.0 1.1416881145647726 0.0 3 8.607852082669811E-4 0.0 0.0 1.65758538271945 0.0 4 8.607852082669811E-4 0.0 0.0 2.3760541032196234 0.0 5 8.607852082669811E-4 0.0 0.0 4.459154307225718 0.0 6 8.607852082669811E-4 0.0 0.0 5.746888978793121 0.0 7 8.607852082669811E-4 0.0 0.0 6.769788734617051 0.0 8 8.607852082669811E-4 0.0 0.0 8.23771444311501 0.0 9 8.607852082669811E-4 0.0 0.0 8.79837254209957 0.0 10 8.607852082669811E-4 0.0 0.0 10.583927992448045 0.0 11 8.607852082669811E-4 0.0 0.0 12.23720944912616 0.0 12 8.607852082669811E-4 0.0 0.0 14.138970902590676 0.0 13 8.607852082669811E-4 0.0 0.0 14.810670293441678 0.0 14 8.607852082669811E-4 0.0 0.0 15.118831398001257 0.0 15 8.607852082669811E-4 0.0 0.0 15.56557892109182 0.0 16 8.607852082669811E-4 0.0 0.0 16.38418565415372 0.0 17 8.607852082669811E-4 0.0 0.0 17.456437095251623 0.0 18 8.607852082669811E-4 0.0 0.0 18.692524654323005 0.0 19 8.607852082669811E-4 0.0 0.0 19.491046399192008 0.0 20 8.607852082669811E-4 0.0 0.0 20.175083711361506 0.0 21 8.607852082669811E-4 0.0 0.0 20.997420513659225 0.0 22 8.607852082669811E-4 0.0 0.0 21.908418192408448 0.0 23 8.607852082669811E-4 0.0 0.0 22.8438047853919 0.0 24 8.607852082669811E-4 0.0 0.0 23.531859095199973 0.0 25 8.607852082669811E-4 0.0 0.0 24.17630028778919 0.0 26 8.607852082669811E-4 0.0 0.0 24.82734083364178 0.0 27 0.0011477136110226414 0.0 0.0 25.474938238661306 0.0 28 0.001434642013778302 0.0 0.0 26.105606867918247 0.0 29 0.001434642013778302 0.0 0.0 26.79193960730979 0.0 30 0.001434642013778302 0.0 0.0 27.536805740863482 0.0 31 0.001434642013778302 0.0 0.0 28.24695353768374 0.0 32 0.001434642013778302 0.0 0.0 28.907175792424518 0.0 33 0.001434642013778302 0.0 0.0 29.614741233619974 0.0 34 0.001434642013778302 0.0 0.0 30.280702056415862 0.0 35 0.001434642013778302 0.0 0.0 30.921413179769253 0.0 36 0.001434642013778302 0.0 0.0 31.54175238652699 0.0 37 0.001434642013778302 0.0 0.0 32.180168082658334 0.0 38 0.001434642013778302 0.0 0.0 32.80595892906843 0.0 39 0.001434642013778302 0.0 0.0 33.50864658741704 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 55 1.8189894E-12 45.000004 2 CAATTGG 20 7.026514E-4 45.000004 2 CCGCTCA 20 7.026514E-4 45.000004 28 GCCGCAT 20 7.026514E-4 45.000004 19 TCAGCGA 20 7.026514E-4 45.000004 18 CGGGCTA 20 7.026514E-4 45.000004 6 CGCCAGT 20 7.026514E-4 45.000004 26 TATTGCG 50 2.1827873E-11 45.0 1 TCCGGGA 35 1.2086639E-7 45.0 4 TCGTTAG 30 2.161134E-6 44.999996 1 TAGCGTG 30 2.161134E-6 44.999996 36 CCGTACG 30 2.161134E-6 44.999996 1 TAGTGCG 30 2.161134E-6 44.999996 1 ACGACAG 30 2.161134E-6 44.999996 1 CGTTTTT 1190 0.0 42.73109 1 CGTTAGG 80 0.0 42.187504 2 ACAAGCG 75 0.0 42.0 14 TACACGC 70 0.0 41.785713 35 ACCCGCA 50 1.0768417E-9 40.5 32 CCGCACT 50 1.0768417E-9 40.5 34 >>END_MODULE