##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935397.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 572742 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.745997325148146 31.0 31.0 34.0 30.0 34.0 2 31.799291827733953 33.0 31.0 34.0 30.0 34.0 3 31.873824514353757 33.0 31.0 34.0 30.0 34.0 4 35.6242304562962 37.0 35.0 37.0 33.0 37.0 5 35.64277109064815 37.0 35.0 37.0 33.0 37.0 6 35.59465867703084 37.0 35.0 37.0 33.0 37.0 7 35.88859381711137 37.0 35.0 37.0 35.0 37.0 8 35.7020543281268 37.0 35.0 37.0 35.0 37.0 9 37.52292480733035 39.0 37.0 39.0 35.0 39.0 10 36.88240254774401 39.0 37.0 39.0 32.0 39.0 11 36.84650680411075 39.0 37.0 39.0 32.0 39.0 12 36.957977588512804 39.0 37.0 39.0 33.0 39.0 13 36.92196486376065 39.0 37.0 39.0 33.0 39.0 14 37.99766386959573 40.0 37.0 41.0 33.0 41.0 15 38.07145101983092 40.0 37.0 41.0 33.0 41.0 16 38.043337139584665 40.0 37.0 41.0 33.0 41.0 17 38.019373470079024 40.0 37.0 41.0 33.0 41.0 18 37.89883053800839 39.0 37.0 41.0 33.0 41.0 19 37.70157418174326 39.0 37.0 41.0 33.0 41.0 20 37.66638032482339 39.0 36.0 41.0 33.0 41.0 21 37.65622566530829 39.0 36.0 41.0 33.0 41.0 22 37.756033257557505 39.0 36.0 41.0 33.0 41.0 23 37.754201717352665 39.0 36.0 41.0 33.0 41.0 24 37.736357731753564 39.0 36.0 41.0 33.0 41.0 25 37.48309535532579 39.0 35.0 41.0 33.0 41.0 26 37.53595685317298 39.0 35.0 41.0 33.0 41.0 27 37.568414748700114 39.0 35.0 41.0 33.0 41.0 28 37.43242856294806 39.0 35.0 41.0 33.0 41.0 29 37.36980699861368 39.0 35.0 41.0 33.0 41.0 30 37.2290490308027 39.0 35.0 41.0 32.0 41.0 31 37.19368232118476 39.0 35.0 41.0 32.0 41.0 32 37.07949652723216 39.0 35.0 41.0 32.0 41.0 33 36.84190263678934 39.0 35.0 41.0 31.0 41.0 34 36.67850096553073 39.0 35.0 41.0 31.0 41.0 35 36.56318726407353 39.0 35.0 41.0 30.0 41.0 36 36.43285982169982 39.0 35.0 41.0 30.0 41.0 37 36.37014746604929 39.0 35.0 41.0 30.0 41.0 38 36.25553041334493 39.0 35.0 41.0 30.0 41.0 39 36.14420454585136 39.0 35.0 41.0 29.0 41.0 40 36.007333144766754 39.0 35.0 41.0 28.0 41.0 41 35.87578351159859 39.0 35.0 41.0 27.0 41.0 42 35.88778717118703 39.0 35.0 41.0 27.0 41.0 43 35.809025704418396 39.0 35.0 41.0 27.0 41.0 44 35.60302544601234 39.0 35.0 41.0 26.0 41.0 45 35.60292068680139 39.0 35.0 41.0 26.0 41.0 46 35.42863278753784 39.0 35.0 40.0 25.0 41.0 47 35.35924552416271 38.0 35.0 40.0 25.0 41.0 48 35.28327763635284 38.0 35.0 40.0 24.0 41.0 49 35.20625691847289 38.0 35.0 40.0 24.0 41.0 50 35.08999514615656 38.0 35.0 40.0 24.0 41.0 51 33.83712212479615 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 7.0 12 6.0 13 5.0 14 7.0 15 17.0 16 27.0 17 75.0 18 169.0 19 339.0 20 643.0 21 1047.0 22 1634.0 23 2435.0 24 3465.0 25 5330.0 26 7935.0 27 9163.0 28 9201.0 29 9334.0 30 10351.0 31 12467.0 32 15527.0 33 21239.0 34 33084.0 35 41915.0 36 45462.0 37 65238.0 38 117158.0 39 159399.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.54153877312996 20.698499498901775 24.58943119240426 15.170530535564005 2 32.748253140157345 27.190776999067644 24.561320804131704 15.499649056643305 3 28.023787324833872 26.489414081733138 30.41910668328846 15.067691910144532 4 24.938977759619515 24.503528639422285 33.899382269852744 16.658111331105456 5 25.523184959370887 28.362508773583915 28.88927300599572 17.22503326104948 6 23.160864752366685 34.81550156964218 28.030072877491087 13.993560800500052 7 74.14001417741322 5.58680872015672 15.732912899700038 4.540264202730025 8 75.99372841523757 6.99966127855125 12.238145622287174 4.768464683924001 9 69.74815885686749 7.306431167960444 14.22665004487186 8.718759930300205 10 36.11172220650834 30.067464931854133 20.394872385821188 13.425940475816336 11 25.892635776667326 24.3921346784416 31.731390399167513 17.983839145723554 12 23.605742201549738 20.951667592039698 34.672679845375406 20.76991036103516 13 22.597958592175885 22.83960317210891 36.99117578246401 17.5712624532512 14 19.145094999144465 27.513609967489728 33.126783089069775 20.214511944296035 15 17.410107867067545 25.250985609576386 38.66435498007829 18.674551543277776 16 19.867758956039545 26.07596439583617 33.118402352193485 20.937874295930804 17 20.275097687964212 26.14754985665448 31.890973597186868 21.68637885819444 18 20.745641143830902 25.345618096804497 33.143020766767584 20.765719992597013 19 21.003872598831585 27.747223007916304 30.642243802619678 20.60666059063243 20 21.685855062139673 26.766327596020545 31.817292952149483 19.730524389690295 21 21.303309343474027 28.912145433720593 31.382891424061793 18.401653798743588 22 19.88259984425797 25.077259918078298 31.85395867598325 23.186181561680478 23 18.907291590279744 28.31763691155878 31.266957897273116 21.50811360088836 24 20.24332072730828 25.94641217162352 31.453080095400722 22.357187005667473 25 19.028986873670867 30.194572774477862 29.47592458733601 21.300515764515264 26 18.146390521386593 28.255828977096144 31.141945238868463 22.4558352626488 27 20.474663984830865 28.01575578532742 30.059084194977842 21.450496034863864 28 18.727280346124434 27.40815236179641 33.04943587164901 20.81513142043014 29 20.34127058954992 26.38570246288905 31.416239772882033 21.856787174679003 30 20.485663701980997 28.887177821776643 31.610917306570848 19.01624116967151 31 21.94129293818159 28.581106327107143 28.355874023556854 21.121726711154412 32 23.09277126524683 30.247650774694364 27.17017435424676 19.489403605812043 33 21.53901756811968 28.507949478124534 28.133260700280406 21.819772253475385 34 21.813137503448324 29.1513456320647 27.84709345569209 21.188423408794886 35 21.09379092156678 27.45407181593108 28.236448523069726 23.215688739432412 36 20.52913877452675 30.630371092044932 27.13839739359083 21.702092739837482 37 21.86324732602114 28.190703667619978 29.509971330895933 20.43607767546295 38 20.37165076072647 29.747250943705893 26.706091049722215 23.175007245845425 39 23.978859591229558 27.32539258514305 26.67309189827182 22.02265592535557 40 22.105066504639087 26.642013332355578 28.6891829130743 22.563737249931034 41 20.424204964888204 26.88278491886399 27.50313404639436 25.18987606985344 42 20.240177950979675 26.77715271448575 29.190455737487387 23.792213597047187 43 21.015570710721406 26.23205562015707 28.798656288520835 23.95371738060069 44 21.159440027097716 26.824468958099807 28.670675452472494 23.345415562329986 45 20.22690845092555 26.418352416969594 28.323049470791382 25.03168966131347 46 22.852523474793188 27.565291178226847 27.29763139424034 22.28455395273963 47 19.49708594794864 25.83833558565637 31.569712016929092 23.094866449465904 48 20.772354742624078 25.60646853207902 29.011666684126535 24.60951004117037 49 20.357682865932652 24.483449790656174 31.42723949003216 23.73162785337901 50 20.245415911527353 24.51836952764072 31.073677153063684 24.162537407768244 51 19.85850522573864 24.340802665074328 28.662294715596204 27.13839739359083 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 246.0 1 375.5 2 505.0 3 5143.0 4 9781.0 5 6470.0 6 3159.0 7 3100.5 8 3042.0 9 3104.5 10 3167.0 11 3251.5 12 3336.0 13 3319.5 14 3303.0 15 3269.0 16 3235.0 17 3082.5 18 2930.0 19 2931.5 20 2933.0 21 2898.5 22 2864.0 23 2924.0 24 2984.0 25 3510.5 26 4805.0 27 5573.0 28 6333.5 29 7094.0 30 8501.5 31 9909.0 32 11142.5 33 12376.0 34 14478.5 35 16581.0 36 18108.0 37 19635.0 38 21088.0 39 22541.0 40 24752.5 41 26964.0 42 29509.0 43 32054.0 44 36565.0 45 41076.0 46 56311.5 47 71547.0 48 65884.0 49 60221.0 50 56406.0 51 52591.0 52 44534.5 53 36478.0 54 31746.0 55 27014.0 56 24290.0 57 21566.0 58 19911.5 59 18257.0 60 16682.0 61 15107.0 62 13347.5 63 11588.0 64 9402.5 65 7217.0 66 5733.0 67 4249.0 68 3524.0 69 2799.0 70 2309.0 71 1819.0 72 1590.0 73 1361.0 74 1036.0 75 583.5 76 456.0 77 366.5 78 277.0 79 170.0 80 63.0 81 51.0 82 39.0 83 30.0 84 21.0 85 14.5 86 8.0 87 16.0 88 24.0 89 14.0 90 4.0 91 2.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 572742.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.65887049214911 #Duplication Level Percentage of deduplicated Percentage of total 1 75.83185676200128 30.83237643265412 2 8.69195263333954 7.068099528856936 3 3.4759361352957034 4.239829114919079 4 2.0784270009694636 3.380259770392132 5 1.4379431517000534 2.9232572190022603 6 1.13726290550289 2.7743895114220334 7 0.939051154267483 2.6726531486805305 8 0.7527149028759506 2.44836302028351 9 0.6569762026499688 2.4040719305972096 >10 4.931713704941527 33.17086541625634 >50 0.04511280440608417 1.2270163198594035 >100 0.013319018439835162 0.9929329100920117 >500 0.004296457561237149 1.286585306619927 >1k 0.002577874536742289 2.5455697336137924 >5k 8.592915122474296E-4 2.033730636750739 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6450 1.1261615177514483 No Hit GAATCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTC 5192 0.9065163721186853 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGC 4694 0.819566227027178 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCG 4503 0.7862178782069413 No Hit GCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 1786 0.3118332512719514 No Hit GAACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCT 1388 0.24234297467271476 No Hit GAATGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTT 1160 0.20253447451033796 No Hit CGCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTG 1041 0.18175723100453606 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGCT 959 0.16744013884087425 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCTGC 865 0.15102786245813998 No Hit GAATGACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCT 860 0.15015486903352643 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTT 808 0.14107573741754575 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTC 753 0.13147280974679698 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATAGAGCCT 707 0.12344127024035256 No Hit CGTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTCT 698 0.1218698820760482 No Hit CGTTCTGTCTCTTATACACATCTGACGCATAGAGCCTCGTATGCCGTCTTC 591 0.10318782278931876 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATAGAGCCTCGTA 588 0.10266402673455063 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.237960547681155E-4 0.0 0.0 0.18524920470299017 0.0 2 5.237960547681155E-4 0.0 0.0 0.8689776548603035 0.0 3 5.237960547681155E-4 0.0 0.0 1.339521110726994 0.0 4 5.237960547681155E-4 0.0 0.0 2.0703912058134377 0.0 5 5.237960547681155E-4 0.0 0.0 4.117036990477388 0.0 6 5.237960547681155E-4 0.0 0.0 5.459526278848068 0.0 7 5.237960547681155E-4 0.0 0.0 6.590576559777352 0.0 8 5.237960547681155E-4 0.0 0.0 8.276850658760837 0.0 9 5.237960547681155E-4 0.0 0.0 9.08122680019974 0.0 10 6.983947396908206E-4 0.0 0.0 11.158252756040241 0.0 11 6.983947396908206E-4 0.0 0.0 12.506154603643525 0.0 12 6.983947396908206E-4 0.0 0.0 14.52922956584291 0.0 13 6.983947396908206E-4 0.0 0.0 15.182752443508596 0.0 14 6.983947396908206E-4 0.0 0.0 15.509251984314053 0.0 15 6.983947396908206E-4 0.0 0.0 15.924273058375324 0.0 16 6.983947396908206E-4 0.0 0.0 16.483163448812903 0.0 17 6.983947396908206E-4 0.0 0.0 17.16968547792898 0.0 18 6.983947396908206E-4 0.0 0.0 18.00933055372227 0.0 19 6.983947396908206E-4 0.0 0.0 18.648012543169525 0.0 20 6.983947396908206E-4 0.0 0.0 19.171633999252716 0.0 21 6.983947396908206E-4 0.0 0.0 19.72301664623862 0.0 22 6.983947396908206E-4 0.0 0.0 20.33690562242685 0.0 23 6.983947396908206E-4 0.0 0.0 20.9570801512723 0.0 24 6.983947396908206E-4 0.0 0.0 21.45468640330201 0.0 25 6.983947396908206E-4 0.0 0.0 21.88507216163648 0.0 26 6.983947396908206E-4 0.0 0.0 22.317378505505097 0.0 27 6.983947396908206E-4 0.0 0.0 22.779890421865343 0.0 28 6.983947396908206E-4 0.0 0.0 23.203990627542595 0.0 29 6.983947396908206E-4 0.0 0.0 23.686232195299105 0.0 30 6.983947396908206E-4 0.0 0.0 24.270439395050477 0.0 31 0.001047592109536231 0.0 0.0 24.75529994308083 0.0 32 0.001047592109536231 0.0 0.0 25.234747931878577 0.0 33 0.001047592109536231 0.0 0.0 25.68678392714346 0.0 34 0.001047592109536231 0.0 0.0 26.186485363392244 0.0 35 0.001047592109536231 0.0 0.0 26.667504740354296 0.0 36 0.001222190794458936 0.0 0.0 27.108890215838894 0.0 37 0.001222190794458936 0.0 0.0 27.553069270282258 0.0 38 0.0013967894793816412 0.0 0.0 27.998994311574844 0.0 39 0.0013967894793816412 0.0 0.0 28.486124642509193 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAT 35 1.210501E-7 45.000004 9 TCGCCGA 20 7.03032E-4 45.0 14 AACGTTC 20 7.03032E-4 45.0 27 GCGTTAG 25 3.8883467E-5 45.0 1 CCATAGG 25 3.8883467E-5 45.0 2 CATACGG 25 3.8883467E-5 45.0 2 TCGACGT 20 7.03032E-4 45.0 26 CGATTCA 30 2.1635879E-6 44.999996 10 CGTTTTT 3435 0.0 43.689957 1 TGCAACG 60 3.6379788E-12 41.249996 1 TCACGAC 50 1.0786607E-9 40.5 25 TCGTAGG 50 1.0786607E-9 40.5 2 TTGTGCG 45 1.9254003E-8 40.0 1 CGGTCTA 45 1.9254003E-8 40.0 31 ACGGTCT 45 1.9254003E-8 40.0 30 CGCATGG 40 3.45417E-7 39.375 2 TATCGCG 40 3.45417E-7 39.375 1 ACAACGA 35 6.242799E-6 38.57143 13 TATTGCG 35 6.242799E-6 38.57143 1 CTACGAA 35 6.242799E-6 38.57143 11 >>END_MODULE