##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935396.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 86803 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58283699872124 31.0 31.0 34.0 30.0 34.0 2 31.676739283204498 31.0 31.0 34.0 30.0 34.0 3 31.749559347027176 33.0 31.0 34.0 30.0 34.0 4 35.54448578966165 37.0 35.0 37.0 33.0 37.0 5 35.567906639171454 37.0 35.0 37.0 33.0 37.0 6 35.52629517412993 37.0 35.0 37.0 33.0 37.0 7 35.80308284275889 37.0 35.0 37.0 35.0 37.0 8 35.53961268619748 37.0 35.0 37.0 33.0 37.0 9 37.35403154268862 39.0 37.0 39.0 34.0 39.0 10 36.72223310254254 39.0 37.0 39.0 32.0 39.0 11 36.843404029814636 39.0 37.0 39.0 33.0 39.0 12 36.97274287755032 39.0 37.0 39.0 33.0 39.0 13 37.01971130030068 39.0 37.0 39.0 33.0 39.0 14 37.98542677096414 40.0 37.0 41.0 33.0 41.0 15 38.05230233978088 40.0 37.0 41.0 33.0 41.0 16 37.937755607525084 40.0 37.0 41.0 33.0 41.0 17 37.984217135352466 40.0 37.0 41.0 33.0 41.0 18 37.862481711461584 39.0 37.0 41.0 33.0 41.0 19 37.71194543967374 39.0 37.0 41.0 33.0 41.0 20 37.70490651244773 39.0 36.0 41.0 33.0 41.0 21 37.6626499084133 39.0 36.0 41.0 33.0 41.0 22 37.808232434362864 39.0 36.0 41.0 33.0 41.0 23 37.8291303295969 39.0 36.0 41.0 33.0 41.0 24 37.822863265094526 39.0 36.0 41.0 33.0 41.0 25 37.55223897791551 39.0 36.0 41.0 33.0 41.0 26 37.6503807472092 39.0 36.0 41.0 33.0 41.0 27 37.6742508899462 39.0 36.0 41.0 33.0 41.0 28 37.562111908574586 39.0 36.0 41.0 33.0 41.0 29 37.584254000437774 39.0 36.0 41.0 33.0 41.0 30 37.42078038777461 39.0 36.0 41.0 33.0 41.0 31 37.33118671013675 39.0 36.0 41.0 33.0 41.0 32 37.28251327719088 39.0 36.0 41.0 33.0 41.0 33 37.075711668951534 39.0 35.0 41.0 32.0 41.0 34 36.85638745204659 39.0 35.0 41.0 31.0 41.0 35 36.72177228897619 39.0 35.0 41.0 31.0 41.0 36 36.57064847989125 39.0 35.0 41.0 30.0 41.0 37 36.39864981625059 39.0 35.0 41.0 30.0 41.0 38 36.32256949644597 39.0 35.0 41.0 30.0 41.0 39 36.28979413153923 39.0 35.0 41.0 30.0 41.0 40 36.129016278239234 39.0 35.0 40.0 30.0 41.0 41 35.992385055816044 39.0 35.0 40.0 29.0 41.0 42 35.95679872815456 39.0 35.0 40.0 29.0 41.0 43 35.81542112599795 39.0 35.0 40.0 28.0 41.0 44 35.59555545315254 39.0 35.0 40.0 27.0 41.0 45 35.709376404041336 39.0 35.0 40.0 27.0 41.0 46 35.5727567019573 39.0 35.0 40.0 26.0 41.0 47 35.503565544969646 38.0 35.0 40.0 26.0 41.0 48 35.39449097381427 38.0 35.0 40.0 26.0 41.0 49 35.28447173484788 38.0 35.0 40.0 26.0 41.0 50 35.14316325472622 38.0 34.0 40.0 24.0 41.0 51 33.777127518634146 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 1.0 13 2.0 14 0.0 15 1.0 16 6.0 17 12.0 18 28.0 19 46.0 20 81.0 21 138.0 22 214.0 23 298.0 24 520.0 25 690.0 26 1038.0 27 1193.0 28 1305.0 29 1304.0 30 1570.0 31 1887.0 32 2472.0 33 3316.0 34 5042.0 35 6146.0 36 7436.0 37 11445.0 38 19560.0 39 21040.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.761194889577546 20.608734721150192 23.648952225153508 12.981118164118751 2 34.26609679388961 27.355045332534587 22.536087462414894 15.842770411160906 3 29.080792138520557 26.755987696277778 28.253631786919808 15.909588378281855 4 26.86888702003387 25.595889542988147 30.510466228125754 17.02475720885223 5 24.593620036173867 29.93214520235476 26.315910740412196 19.15832402105918 6 22.911650518991276 35.166987316106585 27.71102381254104 14.210338352361093 7 70.88119074225546 8.761217930255867 15.105468704998676 5.252122622490006 8 69.60128106171446 9.182862343467391 14.444201237284426 6.771655357533726 9 63.04505604645001 10.090665069179638 17.032821446263377 9.831457438106977 10 32.62099236201514 27.754801101344423 24.188104097784638 15.4361024388558 11 25.17424512977662 25.68114005276315 29.058903494118866 20.08571132334136 12 22.19623745723074 23.051046622812578 34.58521018858795 20.16750573136873 13 22.253839153024664 24.227273250924508 36.142760042855656 17.376127553195168 14 18.274714007580386 28.334274161031303 33.39515915348548 19.995852677902835 15 16.96945958089006 27.174176007741668 38.033247698812254 17.82311671255602 16 18.995887238920314 28.034745342902895 32.51039710609081 20.458970312085988 17 19.123763003582823 27.448360079720747 31.194774374157575 22.23310254253885 18 18.40143773832702 27.726000253447463 34.08407543518081 19.78848657304471 19 18.826538253286177 29.361888413994908 31.31919403707245 20.492379295646465 20 19.14219554623688 29.871087404813196 32.24542930543875 18.74128774351117 21 18.531617570821286 30.169464189025724 33.15553609898275 18.143382141170235 22 16.547815167678536 27.717936016036308 31.142932847943044 24.59131596834211 23 16.568551778164352 28.485190604011386 33.01037982558206 21.935877792242202 24 19.14334758015276 26.68340955957743 31.566881328986323 22.606361531283483 25 16.570855845996107 31.0380977615981 29.3676485835743 23.02339780883149 26 16.742508899462 29.500132483900327 31.53232031150997 22.225038305127704 27 20.334550649171113 27.65572618457887 30.996624540626478 21.013098625623538 28 15.676877527274403 29.21442807276246 31.42633319124915 23.682361208713985 29 18.167574853403686 28.781263320392153 29.988594864232805 23.06256696197136 30 21.667453889842516 30.023155881709158 28.39417992465698 19.915210303791344 31 19.606465214335913 32.95738626545165 25.836664631406748 21.599483888805686 32 18.64221282674562 32.498876766932014 26.143105653030425 22.715804753291938 33 21.122541847631997 30.32729283550108 25.802103613930395 22.748061702936536 34 20.07764708593021 30.713224197320372 26.99215464903287 22.216974067716553 35 20.538460652281604 31.539232515005246 24.81711461585429 23.105192216858864 36 23.219243574530836 33.20507355736553 25.1270117392256 18.448671128878033 37 21.689342534244208 30.986256235383568 26.987546513369352 20.33685471700287 38 18.781608930566914 32.682050159556695 25.088994620001614 23.447346289874773 39 23.826365448198793 27.381542112599792 26.50369226870039 22.288400170501017 40 22.472725597041578 29.062359595866504 28.4252848403857 20.039629966706222 41 22.321809154061494 30.08882181491423 26.040574634517238 21.548794396507034 42 22.27918389917399 29.166042648295566 28.594633826019837 19.960139626510603 43 22.984228655691624 26.773268205015953 28.74324620116816 21.499256938124258 44 20.871398453970485 27.083165328387267 26.425353962420655 25.620082255221593 45 21.22507286614518 25.33552987799961 26.788244645922376 26.651152609932836 46 23.246892388511917 28.492102807506654 26.87464718961326 21.38635761436817 47 20.482010990403555 27.289379399329516 30.866444708132207 21.36216490213472 48 19.907146066380193 27.040540073499763 29.213276038846587 23.83903782127346 49 21.50386507378777 24.473808508922502 31.81341658698432 22.208909830305405 50 20.380632005806252 23.60287086851837 30.21784961349262 25.79864751218276 51 19.553471654205502 23.388592560164973 27.971383477529578 29.08655230809995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 104.0 1 127.0 2 150.0 3 749.0 4 1348.0 5 916.5 6 485.0 7 474.0 8 463.0 9 468.5 10 474.0 11 488.5 12 503.0 13 494.5 14 486.0 15 509.5 16 533.0 17 510.5 18 488.0 19 502.0 20 516.0 21 555.0 22 594.0 23 552.0 24 510.0 25 665.0 26 911.5 27 1003.0 28 1109.0 29 1215.0 30 1408.0 31 1601.0 32 1671.0 33 1741.0 34 2044.5 35 2348.0 36 2524.5 37 2701.0 38 2958.5 39 3216.0 40 3608.0 41 4000.0 42 4508.0 43 5016.0 44 5534.5 45 6053.0 46 8262.5 47 10472.0 48 10709.0 49 10946.0 50 10619.5 51 10293.0 52 8292.5 53 6292.0 54 5112.0 55 3932.0 56 3202.0 57 2472.0 58 2142.5 59 1813.0 60 1633.5 61 1454.0 62 1294.0 63 1134.0 64 877.5 65 621.0 66 487.0 67 353.0 68 308.0 69 263.0 70 215.5 71 168.0 72 133.0 73 98.0 74 76.5 75 44.0 76 33.0 77 23.5 78 14.0 79 14.5 80 15.0 81 8.5 82 2.0 83 3.5 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 86803.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.70520604126586 #Duplication Level Percentage of deduplicated Percentage of total 1 80.32518831526731 50.36807483612318 2 10.124931104170495 12.697717820812645 3 3.8048870108396105 7.157586719353018 4 1.9878743340069813 4.986002787922077 5 1.1537754914569172 3.6173864958584376 6 0.7165166268601874 2.6957593631556516 7 0.48135219548043356 2.1128302017211387 8 0.3325372037479331 1.6681451101920441 9 0.22965276501929083 1.2960381553632938 >10 0.8010288443872865 7.96055435872032 >50 0.020209443321697593 0.9561881501791414 >100 0.01837222120154327 2.9250141124154694 >500 0.0036744442403086534 1.5587018881835881 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 850 0.9792288284967109 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTC 503 0.5794730596868772 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCG 427 0.4919184820801124 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC 427 0.4919184820801124 No Hit GCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 373 0.4297086506226743 No Hit CCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 278 0.32026542861421836 No Hit CTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGCT 266 0.3064410216236766 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCC 262 0.30183288596016267 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTT 156 0.1797172908770434 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 142 0.16358881605474465 No Hit TCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCTGC 107 0.12326762899899774 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCT 101 0.11635542550372682 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGC 93 0.10713915417669896 No Hit GAACTGTCTCTTATACACATCTGACGCAGACAGAGTCGTATGCCGTCTTCT 92 0.10598712026082047 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.002304067831756967 0.0 0.0 0.3433061069317881 0.0 2 0.002304067831756967 0.0 0.0 1.467691208829188 0.0 3 0.002304067831756967 0.0 0.0 1.9215925716853104 0.0 4 0.002304067831756967 0.0 0.0 2.9019734340978998 0.0 5 0.002304067831756967 0.0 0.0 6.028593481792104 0.0 6 0.002304067831756967 0.0 0.0 7.7151711346382035 0.0 7 0.002304067831756967 0.0 0.0 9.352211329101529 0.0 8 0.002304067831756967 0.0 0.0 11.58370102415815 0.0 9 0.002304067831756967 0.0 0.0 12.467311037636948 0.0 10 0.002304067831756967 0.0 0.0 14.972984804672649 0.0 11 0.002304067831756967 0.0 0.0 18.01089824084421 0.0 12 0.002304067831756967 0.0 0.0 20.598366415907286 0.0 13 0.002304067831756967 0.0 0.0 21.601787956637445 0.0 14 0.002304067831756967 0.0 0.0 22.055689319493567 0.0 15 0.002304067831756967 0.0 0.0 22.80220729698282 0.0 16 0.002304067831756967 0.0 0.0 24.19501630127991 0.0 17 0.002304067831756967 0.0 0.0 25.757174291211133 0.0 18 0.002304067831756967 0.0 0.0 27.364261603861618 0.0 19 0.002304067831756967 0.0 0.0 28.48173450226375 0.0 20 0.002304067831756967 0.0 0.0 29.49667638215269 0.0 21 0.002304067831756967 0.0 0.0 30.66944690851699 0.0 22 0.002304067831756967 0.0 0.0 31.943596419478588 0.0 23 0.002304067831756967 0.0 0.0 33.063373385712474 0.0 24 0.002304067831756967 0.0 0.0 33.99191272191053 0.0 25 0.002304067831756967 0.0 0.0 34.83404951441771 0.0 26 0.002304067831756967 0.0 0.0 35.61973664504683 0.0 27 0.002304067831756967 0.0 0.0 36.3708627581996 0.0 28 0.002304067831756967 0.0 0.0 37.225671923781434 0.0 29 0.002304067831756967 0.0 0.0 38.07472091978388 0.0 30 0.002304067831756967 0.0 0.0 38.90072923746875 0.0 31 0.002304067831756967 0.0 0.0 39.73595382648065 0.0 32 0.002304067831756967 0.0 0.0 40.55620197458613 0.0 33 0.002304067831756967 0.0 0.0 41.30848012165478 0.0 34 0.002304067831756967 0.0 0.0 42.0250452173312 0.0 35 0.002304067831756967 0.0 0.0 42.70128912595187 0.0 36 0.002304067831756967 0.0 0.0 43.41324608596477 0.0 37 0.002304067831756967 0.0 0.0 44.080273723258415 0.0 38 0.002304067831756967 0.0 0.0 44.79568678501895 0.0 39 0.002304067831756967 0.0 0.0 45.489211202377795 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGGGCG 30 2.1423093E-6 45.000004 5 CGGGCGA 35 1.1946577E-7 45.000004 6 GCGGGCG 25 3.8609774E-5 45.0 5 AATCTAT 25 3.8609774E-5 45.0 16 GCCCAGG 20 6.9972646E-4 45.0 2 AGTAGGG 40 6.690243E-9 45.0 3 GCGATAT 20 6.9972646E-4 45.0 9 ATCTATA 25 3.8609774E-5 45.0 17 TCTGGGA 20 6.9972646E-4 45.0 4 TACGGGA 20 6.9972646E-4 45.0 4 AGCTACG 20 6.9972646E-4 45.0 9 GGATCTT 20 6.9972646E-4 45.0 8 GGCGATA 50 2.1827873E-11 45.0 8 TCTACGG 20 6.9972646E-4 45.0 2 CGAGGGT 20 6.9972646E-4 45.0 4 GCTACGA 20 6.9972646E-4 45.0 10 CGAATAT 20 6.9972646E-4 45.0 14 CGGGAAT 25 3.8609774E-5 45.0 6 ACGGGAC 20 6.9972646E-4 45.0 5 TACTGAC 20 6.9972646E-4 45.0 20 >>END_MODULE