##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935395.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 292349 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.389219733948124 31.0 31.0 34.0 30.0 34.0 2 31.44141420015119 31.0 31.0 34.0 30.0 34.0 3 31.551724137931036 31.0 31.0 34.0 30.0 34.0 4 35.385022695476984 37.0 35.0 37.0 33.0 37.0 5 35.347365648591236 37.0 35.0 37.0 33.0 37.0 6 35.21942267632179 37.0 35.0 37.0 32.0 37.0 7 35.50029245867097 37.0 35.0 37.0 33.0 37.0 8 35.0203421253365 37.0 35.0 37.0 32.0 37.0 9 36.7979025069352 39.0 37.0 39.0 32.0 39.0 10 36.40153378325221 38.0 35.0 39.0 32.0 39.0 11 36.50794427208576 38.0 35.0 39.0 32.0 39.0 12 36.562430519687084 39.0 35.0 39.0 32.0 39.0 13 36.27199682571173 39.0 35.0 39.0 32.0 39.0 14 37.28825137079313 39.0 36.0 41.0 32.0 41.0 15 37.09534494730613 39.0 36.0 41.0 31.0 41.0 16 37.38652432537823 39.0 36.0 41.0 32.0 41.0 17 37.097838542290205 39.0 35.0 41.0 31.0 41.0 18 37.05153771690685 39.0 36.0 40.0 31.0 41.0 19 36.875894906430325 38.0 35.0 40.0 31.0 41.0 20 36.479888763087956 38.0 35.0 40.0 30.0 41.0 21 36.765988595822115 38.0 35.0 40.0 31.0 41.0 22 36.93658948722246 39.0 35.0 40.0 32.0 41.0 23 36.856582372438424 39.0 35.0 40.0 31.0 41.0 24 36.81561763508683 39.0 35.0 40.0 31.0 41.0 25 36.726556273495035 38.0 35.0 40.0 31.0 41.0 26 36.64065209732204 38.0 35.0 40.0 31.0 41.0 27 36.642102418684516 38.0 35.0 40.0 31.0 41.0 28 36.38836117106609 38.0 35.0 40.0 30.0 41.0 29 36.30627777074661 38.0 35.0 40.0 30.0 41.0 30 36.22382836951726 38.0 35.0 40.0 30.0 41.0 31 36.296847261321226 38.0 35.0 40.0 30.0 41.0 32 35.85430085274791 38.0 35.0 40.0 29.0 41.0 33 35.50387379467691 38.0 35.0 40.0 26.0 41.0 34 35.37097441756257 38.0 35.0 40.0 25.0 41.0 35 35.212400247649214 38.0 35.0 40.0 24.0 41.0 36 35.16030839852368 38.0 35.0 40.0 24.0 41.0 37 35.07113073757735 38.0 35.0 40.0 23.0 41.0 38 35.02631443924898 38.0 35.0 40.0 23.0 41.0 39 34.84375523774666 38.0 34.0 40.0 22.0 41.0 40 34.6547174780827 38.0 34.0 40.0 22.0 41.0 41 34.69331860208176 38.0 34.0 40.0 21.0 41.0 42 34.75006926652733 38.0 34.0 40.0 22.0 41.0 43 34.776322135529796 38.0 34.0 40.0 21.0 41.0 44 34.65919500323244 38.0 34.0 40.0 21.0 41.0 45 34.769621240366824 38.0 34.0 40.0 22.0 41.0 46 34.49998802800762 38.0 34.0 40.0 21.0 41.0 47 34.309041590701526 38.0 34.0 40.0 21.0 41.0 48 34.28030538842274 38.0 34.0 40.0 20.0 41.0 49 34.33392623200353 38.0 34.0 40.0 20.0 41.0 50 34.12762827989834 38.0 33.0 40.0 20.0 41.0 51 32.87759150877889 36.0 31.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 1.0 11 1.0 12 2.0 13 3.0 14 4.0 15 16.0 16 20.0 17 55.0 18 114.0 19 280.0 20 637.0 21 1139.0 22 1914.0 23 2603.0 24 3347.0 25 4225.0 26 5439.0 27 5783.0 28 5578.0 29 5774.0 30 6358.0 31 8090.0 32 10801.0 33 14567.0 34 20538.0 35 23872.0 36 25488.0 37 33815.0 38 55403.0 39 56463.0 40 15.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.926984528765274 14.80114520658528 17.11002945110125 14.16184081354819 2 28.48718483730062 41.856137698435774 17.164416502194296 12.492260962069308 3 21.033764439077952 42.313809864237605 25.470242757799756 11.18218293888469 4 19.41241461404007 17.55059877064741 49.12347912939671 13.913507485915805 5 35.74939541438486 20.016145086865357 26.702673858983612 17.53178563976617 6 17.771567544270717 42.04119049492216 28.717731204827107 11.46951075598001 7 56.02755610588714 4.863707418188535 33.754177370197944 5.354559105726375 8 52.442799530697904 20.975956818733774 19.38607623080633 7.195167419761997 9 48.885407509517734 5.9059548690093004 18.08181317534864 27.126824446124324 10 37.27189078806495 18.29046789966786 27.11451039682024 17.32313091544695 11 30.709528679762887 18.82886549979648 30.847035563658505 19.614570256782134 12 21.394976551997782 15.473287064433263 35.43025630325399 27.701480080314965 13 22.73926026769375 18.655442638763944 44.519050860444196 14.086246233098112 14 18.907538592572575 30.75912693390434 30.06680371747466 20.26653075604842 15 12.698179230987622 21.171613379898684 46.51563713233156 19.614570256782134 16 14.433091955163176 24.106803854297432 29.605368925496585 31.854735265042812 17 14.892474405590578 26.30759811047755 36.9483049369076 21.851622547024277 18 15.402823337859886 23.858128469739935 34.573403705844726 26.16564448655545 19 15.003642906252459 26.785793691786186 30.661982767172113 27.548580634789243 20 18.001771854872086 25.845821261574354 39.97243021183585 16.179976671717707 21 16.63354415441818 34.636342180065604 32.131117260534495 16.598996404981715 22 14.068117216067098 21.586528430061332 36.99756113412394 27.34779321974763 23 16.3650294682041 30.805988732644884 33.53149831194908 19.29748348720194 24 19.546158871759438 24.20292185025432 28.918176562943604 27.332742715042635 25 14.080431265371182 38.40649360866635 26.939719308087252 20.57335581787521 26 14.745389927791782 23.321783211162 34.56279994116621 27.370026919880008 27 21.69153990607117 26.583980105969236 26.785793691786186 24.938686296173408 28 12.662263253850705 25.994616023998713 36.30250146229336 25.040619259857227 29 18.840495435250336 26.708830883635652 28.934937352274165 25.515736328839843 30 14.606514816195713 31.477104419717527 29.76203099719855 24.154349766888206 31 19.089512876732943 23.01598432011055 23.595770808177896 34.2987319949786 32 20.81826857625646 34.73417046064806 24.195396597901823 20.252164365193657 33 15.902226448525564 26.574402512066058 22.96775429366955 34.555616745738824 34 18.255920150231404 28.161888701517707 25.665215205114432 27.916975943136457 35 14.288059818915064 24.501537545878385 29.27665222046253 31.933750414744022 36 14.598989563843215 29.579714656113072 23.35291039134733 32.46838538869638 37 13.640888116600363 26.443394709747597 31.167884959414945 28.747832214237096 38 14.677662656619313 28.346257384153873 23.705229024214212 33.270850935012604 39 18.67562399734564 29.27459987891185 25.183256997629545 26.86651912611297 40 15.606347208302406 27.26604161464551 33.793513916586 23.334097260466084 41 15.06076641274641 24.354795125004703 23.924145456286837 36.66029300596205 42 15.731540042893938 21.365559656438023 39.50039165517926 23.40250864548878 43 19.863929755189858 22.731735015341254 25.095690424800495 32.30864480466839 44 19.0908811044334 21.25404909885103 30.329845492886925 29.325224303828644 45 16.421810917772937 19.552657953336595 29.520880864993554 34.50465026389692 46 26.224136220749855 25.95288507913487 25.221225316317142 22.601753383798133 47 13.321406948544375 21.69564458917253 41.671084901949385 23.311863560333713 48 19.038888451816153 24.27680614607883 26.83607605977787 29.848229342327148 49 16.484407335068703 17.913179111267695 39.80174380620423 25.80066974745937 50 19.85811478746293 18.588057424516588 32.12256583740666 29.43126195061382 51 18.108835672432605 19.337504147440217 27.334110942743088 35.219549237384086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 422.0 1 538.5 2 655.0 3 3275.0 4 5895.0 5 3893.0 6 1891.0 7 1847.0 8 1803.0 9 1773.0 10 1743.0 11 1757.5 12 1772.0 13 1664.0 14 1556.0 15 1519.0 16 1482.0 17 1467.5 18 1453.0 19 1442.0 20 1431.0 21 1405.5 22 1380.0 23 1314.5 24 1249.0 25 1338.5 26 1816.0 27 2204.0 28 2261.5 29 2319.0 30 2662.5 31 3006.0 32 3566.0 33 4126.0 34 4719.0 35 5312.0 36 5937.0 37 6562.0 38 6992.0 39 7422.0 40 8350.0 41 9278.0 42 10473.0 43 11668.0 44 14207.0 45 16746.0 46 47115.0 47 77484.0 48 55667.5 49 33851.0 50 31484.0 51 29117.0 52 23037.0 53 16957.0 54 14694.5 55 12432.0 56 10673.0 57 8914.0 58 7687.5 59 6461.0 60 5592.5 61 4724.0 62 4054.0 63 3384.0 64 2846.5 65 2309.0 66 1832.0 67 1355.0 68 1141.0 69 927.0 70 814.0 71 701.0 72 555.0 73 409.0 74 325.0 75 200.0 76 159.0 77 107.0 78 55.0 79 43.0 80 31.0 81 28.0 82 25.0 83 15.5 84 6.0 85 3.5 86 1.0 87 1.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 292349.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.997111884922205 #Duplication Level Percentage of deduplicated Percentage of total 1 75.66380192892773 27.993421456031314 2 10.420198703948405 7.71034514626201 3 3.9972168298393664 4.436564348455833 4 2.174277147569231 3.2176789958979337 5 1.473150831763802 2.7251163073065796 6 1.1174383889547677 2.480519586040005 7 0.8029482477799114 2.079473631264093 8 0.711399880434614 2.1055792777087756 9 0.575087945066834 1.9148933742576886 >10 2.964983992083482 16.581741459456413 >50 0.05472285699752817 1.4138984024697396 >100 0.026863947980604735 2.3665589246232637 >500 0.006964727254230858 1.7982019515919494 >1k 0.007959688290549551 7.94043281428658 >5k 0.0 0.0 >10k+ 0.0029848831089560822 15.235574324347839 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGC 14741 5.04226113309777 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCG 13471 4.607848838203654 No Hit GAATCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTC 13177 4.507284102220291 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3776 1.2916069492284905 No Hit GCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 3515 1.2023300917738728 TruSeq Adapter, Index 13 (96% over 25bp) GAATGACTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCT 3065 1.0484044754728081 No Hit GAACTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCT 2744 0.938604202511382 TruSeq Adapter, Index 13 (100% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCAACTCT 2578 0.8818227529425448 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACCAACTCTCGTA 2331 0.7973346924395158 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTC 2285 0.7816000738842959 No Hit GAATGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTT 1277 0.4368066933699106 No Hit CTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGCT 954 0.3263223065582574 TruSeq Adapter, Index 13 (100% over 25bp) CCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 773 0.264410003112718 TruSeq Adapter, Index 13 (96% over 25bp) CGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTG 741 0.25346418150908673 TruSeq Adapter, Index 13 (100% over 23bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATG 696 0.23807161987898026 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACCAACTCTCGTAT 596 0.2038659273676325 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACCAACTCTCGT 578 0.1977089027155899 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTT 547 0.18710513803707213 TruSeq Adapter, Index 13 (95% over 21bp) CGTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCT 493 0.16863406408094433 TruSeq Adapter, Index 13 (100% over 22bp) CGTTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCT 492 0.16829200715583087 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCACCAACTC 488 0.16692377945537695 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCC 424 0.14503213624811442 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 376 0.1286134038426675 No Hit CGTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTC 357 0.12211432226551143 TruSeq Adapter, Index 13 (100% over 21bp) GGAATGATACCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCC 335 0.11458906991301493 No Hit TCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTCTTCTGC 299 0.10227502060892973 TruSeq Adapter, Index 13 (96% over 25bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCACCAACTCTCG 298 0.10193296368381626 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCACCAACTCTCGTATGCCGTC 297 0.10159090675870279 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.420569251134774E-4 0.0 0.0 0.35197657594176823 0.0 2 3.420569251134774E-4 0.0 0.0 2.1522221728139996 0.0 3 3.420569251134774E-4 0.0 0.0 2.7501376779123583 0.0 4 3.420569251134774E-4 0.0 0.0 4.426216610968398 0.0 5 3.420569251134774E-4 0.0 0.0 10.66294052656243 0.0 6 3.420569251134774E-4 0.0 0.0 12.39409062456174 0.0 7 3.420569251134774E-4 0.0 0.0 14.594200766891626 0.0 8 3.420569251134774E-4 0.0 0.0 16.786101543018788 0.0 9 3.420569251134774E-4 0.0 0.0 17.461321913192794 0.0 10 3.420569251134774E-4 0.0 0.0 23.44150313495172 0.0 11 3.420569251134774E-4 0.0 0.0 25.152471874369333 0.0 12 3.420569251134774E-4 0.0 0.0 31.735015341253092 0.0 13 3.420569251134774E-4 0.0 0.0 32.669172803738 0.0 14 3.420569251134774E-4 0.0 0.0 33.151473068148 0.0 15 3.420569251134774E-4 0.0 0.0 34.377747144679816 0.0 16 3.420569251134774E-4 0.0 0.0 35.30403729788711 0.0 17 3.420569251134774E-4 0.0 0.0 36.28539861603768 0.0 18 3.420569251134774E-4 0.0 0.0 37.24931503100746 0.0 19 3.420569251134774E-4 0.0 0.0 38.870664856045344 0.0 20 3.420569251134774E-4 0.0 0.0 39.633451799048395 0.0 21 3.420569251134774E-4 0.0 0.0 40.283702013689116 0.0 22 6.841138502269548E-4 0.0 0.0 41.03178050891229 0.0 23 6.841138502269548E-4 0.0 0.0 41.72855046536845 0.0 24 6.841138502269548E-4 0.0 0.0 42.26557983779661 0.0 25 6.841138502269548E-4 0.0 0.0 42.745485703730814 0.0 26 6.841138502269548E-4 0.0 0.0 43.23394299279286 0.0 27 6.841138502269548E-4 0.0 0.0 43.84861928722178 0.0 28 6.841138502269548E-4 0.0 0.0 44.28918860676794 0.0 29 6.841138502269548E-4 0.0 0.0 44.8009057667377 0.0 30 6.841138502269548E-4 0.0 0.0 45.341013651491885 0.0 31 6.841138502269548E-4 0.0 0.0 45.81202603737314 0.0 32 6.841138502269548E-4 0.0 0.0 46.2755131709019 0.0 33 6.841138502269548E-4 0.0 0.0 46.73592179210464 0.0 34 6.841138502269548E-4 0.0 0.0 47.17033408699876 0.0 35 6.841138502269548E-4 0.0 0.0 47.626638025100135 0.0 36 6.841138502269548E-4 0.0 0.0 48.03608016446097 0.0 37 0.0010261707753404321 0.0 0.0 48.44996904384828 0.0 38 0.0010261707753404321 0.0 0.0 48.89635333112137 0.0 39 0.0010261707753404321 0.0 0.0 49.398150840262836 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGA 25 3.883645E-5 45.000004 13 ACCGGCT 25 3.883645E-5 45.000004 34 AACCCTC 30 2.159928E-6 45.000004 39 ACGGCTA 60 0.0 45.000004 30 TCTAAAG 25 3.883645E-5 45.000004 24 CGGCTAT 50 2.1827873E-11 45.000004 31 TGCTAGG 30 2.159928E-6 45.000004 2 CACAACG 25 3.883645E-5 45.000004 12 CACCGGT 25 3.883645E-5 45.000004 16 CGTTTTC 25 3.883645E-5 45.000004 1 ATCCTGC 20 7.024648E-4 45.0 20 ACCGGTG 20 7.024648E-4 45.0 17 CTCGTTC 20 7.024648E-4 45.0 15 CGACGAA 20 7.024648E-4 45.0 19 CTATCCC 20 7.024648E-4 45.0 34 GTCCGCT 20 7.024648E-4 45.0 26 CCGACTT 35 1.2077726E-7 45.0 44 GGATTCA 20 7.024648E-4 45.0 8 CCTATCA 20 7.024648E-4 45.0 38 CGTTTTT 2060 0.0 44.344658 1 >>END_MODULE