##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935391.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 179015 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.647269781861855 31.0 31.0 34.0 30.0 34.0 2 31.731095159623496 33.0 31.0 34.0 30.0 34.0 3 31.783023768957907 33.0 31.0 34.0 30.0 34.0 4 35.568455157389046 37.0 35.0 37.0 33.0 37.0 5 35.59846940200542 37.0 35.0 37.0 33.0 37.0 6 35.55812082786359 37.0 35.0 37.0 33.0 37.0 7 35.85199005669916 37.0 35.0 37.0 35.0 37.0 8 35.60736251152138 37.0 35.0 37.0 33.0 37.0 9 37.40596039438036 39.0 37.0 39.0 34.0 39.0 10 36.7990280144122 39.0 37.0 39.0 32.0 39.0 11 36.86649722090328 39.0 37.0 39.0 32.0 39.0 12 37.01123928162445 39.0 37.0 39.0 33.0 39.0 13 36.986397787894866 39.0 37.0 39.0 33.0 39.0 14 38.031891182303156 40.0 37.0 41.0 33.0 41.0 15 38.10438790045527 40.0 37.0 41.0 33.0 41.0 16 38.057257771695106 40.0 37.0 41.0 33.0 41.0 17 38.02561237885094 40.0 37.0 41.0 33.0 41.0 18 37.82000391028685 39.0 37.0 41.0 33.0 41.0 19 37.549155098734744 39.0 37.0 40.0 33.0 41.0 20 37.41653492724073 39.0 35.0 40.0 33.0 41.0 21 37.39345306259252 39.0 35.0 40.0 33.0 41.0 22 37.52386112895567 39.0 35.0 41.0 33.0 41.0 23 37.5011367762478 39.0 35.0 41.0 33.0 41.0 24 37.46492193391615 39.0 35.0 41.0 33.0 41.0 25 37.24431472222998 39.0 35.0 40.0 33.0 41.0 26 37.32957573387705 39.0 35.0 41.0 33.0 41.0 27 37.35207105549814 39.0 35.0 41.0 33.0 41.0 28 37.22696980699941 39.0 35.0 41.0 33.0 41.0 29 37.18564924726978 39.0 35.0 41.0 33.0 41.0 30 36.98524146021283 39.0 35.0 40.0 32.0 41.0 31 36.863882914839536 39.0 35.0 40.0 32.0 41.0 32 36.55151802921543 39.0 35.0 41.0 31.0 41.0 33 36.103253917269505 39.0 35.0 41.0 30.0 41.0 34 35.77318101835042 39.0 35.0 41.0 26.0 41.0 35 35.46735748400972 39.0 35.0 41.0 24.0 41.0 36 35.28938915733318 39.0 35.0 41.0 23.0 41.0 37 35.16069044493478 39.0 35.0 41.0 22.0 41.0 38 35.06674301036226 39.0 35.0 40.0 22.0 41.0 39 35.00036868418847 39.0 35.0 40.0 21.0 41.0 40 34.96210373432394 39.0 35.0 40.0 21.0 41.0 41 34.821450716420415 39.0 35.0 40.0 20.0 41.0 42 34.856319302851716 39.0 35.0 40.0 20.0 41.0 43 34.7683937100243 39.0 35.0 40.0 19.0 41.0 44 34.63697455520487 39.0 34.0 40.0 18.0 41.0 45 34.59740803843253 38.0 34.0 40.0 20.0 41.0 46 34.452006815071364 38.0 34.0 40.0 20.0 41.0 47 34.37759405636399 38.0 34.0 40.0 19.0 41.0 48 34.303203642152894 38.0 34.0 40.0 18.0 41.0 49 34.243789626567605 38.0 34.0 40.0 18.0 41.0 50 34.11574449068514 38.0 34.0 40.0 18.0 41.0 51 32.93302237242689 37.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 4.0 14 4.0 15 10.0 16 9.0 17 42.0 18 44.0 19 137.0 20 261.0 21 367.0 22 574.0 23 865.0 24 1303.0 25 2291.0 26 3869.0 27 4478.0 28 4103.0 29 3691.0 30 3780.0 31 3986.0 32 5173.0 33 6582.0 34 10086.0 35 12608.0 36 14517.0 37 20711.0 38 36493.0 39 43014.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.39471552663185 20.351367203865596 23.54551294584253 19.708404323660027 2 37.389045610703015 26.59330223724269 22.07636231600704 13.941289836047257 3 26.73072088931095 25.082814289305368 34.37142138926906 13.815043432114626 4 23.910845459877663 22.219925704549897 37.92196184677262 15.947266988799822 5 24.525877719744155 25.557076222662907 32.79334134011116 17.123704717481775 6 21.31888389241125 33.06259252017988 33.14526715638355 12.473256431025332 7 67.3077675055163 5.610703013713934 22.09535513783761 4.9861743429321566 8 67.17872803954977 8.196519844705751 19.048683071251013 5.576069044493479 9 61.112755914308856 7.829511493450269 20.836242772951987 10.221489819288887 10 31.444850990140495 26.815071362734965 27.870848811552108 13.86922883557244 11 23.756668435605953 22.480797698516884 36.18914616093624 17.573387704940927 12 20.73680976454487 20.013406697762758 39.57657179565958 19.67321174203279 13 20.311705722984108 21.226154232885513 42.6014579783817 15.86068206574868 14 17.213641314973604 26.20562522693629 38.029774041281456 18.550959416808645 15 15.728849537748232 23.576236628215515 43.46898304611345 17.2259307879228 16 17.05052649219339 25.158785576627658 37.03656118202385 20.7541267491551 17 17.573387704940927 24.89735497025389 36.959472669888 20.569784654917186 18 18.16719269334972 24.475602603133815 37.868893668128365 19.488311035388094 19 17.705220232941375 26.44638717425914 36.25115213808899 19.597240454710498 20 18.144848197078456 26.16540513364802 37.61863530989023 18.07111135938329 21 17.756612574365278 28.740608328910984 36.84663296371812 16.656146133005613 22 16.785185598972152 24.177862190319246 36.65782197022595 22.37913024048264 23 16.286344719716226 27.003882356227134 36.45113537971678 20.258637544339862 24 17.36558388961819 24.232047593777057 36.38912940256403 22.013239114040722 25 16.409239449208165 28.67860235175823 34.004413038013574 20.907745161020024 26 17.09968438399017 25.33642432198419 36.246683238834734 21.317208055190907 27 19.322961762980757 25.91905706225735 34.782001508253494 19.975979666508394 28 17.260006144736476 24.328128927743485 37.8074463033824 20.60441862413764 29 20.691562159595563 23.471217495740582 34.79484959360947 21.04237075105438 30 20.098315783593552 25.617964975002096 35.996983493003384 18.28673574840097 31 22.877971119738568 25.01745663771192 32.31963801916041 19.7849342233891 32 21.26190542691953 27.95631650978968 31.98782224953216 18.793955813758622 33 19.70225958718543 26.611177834259696 32.38890595760132 21.29765662095355 34 23.501382565706784 25.287825042594196 31.456581850682902 19.754210541016114 35 20.0999916208139 25.700080998798985 31.86101723319275 22.33891014719437 36 22.814847917772255 26.224618048766864 32.5620758037036 18.398458229757285 37 20.40946289417088 27.24911320280423 33.56646091109683 18.774962991928053 38 19.663715331117505 28.817696841046843 30.465603441052423 21.05298438678323 39 21.97581208278636 27.283188559617912 31.12029718180041 19.620702175795323 40 20.888752339189452 26.126860877580093 32.03139401726112 20.952992765969334 41 20.547998771052704 25.007960226796637 32.144233723431 22.299807278719662 42 20.656369577968327 23.768957908555148 34.10105298438678 21.473619529089742 43 20.665307376476832 24.335949501438428 34.079825712929086 20.918917409155657 44 21.16805854258023 25.19230232103455 31.491215819903363 22.148423316481857 45 20.821718850375667 24.313605005167165 30.761109404239868 24.1035667402173 46 23.365081138452084 25.441443454459122 30.008658492305113 21.184816914783678 47 19.020193838505154 23.835991397368936 35.600368684188474 21.543446079937436 48 19.7123146105075 23.9097282350641 32.93020137977265 23.447755774655754 49 20.08826076027149 21.856269027735106 35.342848364662174 22.71262184733123 50 19.71566628494819 21.865765438650392 34.12116303103092 24.2974052453705 51 19.607295478032565 21.476971203530432 31.435354579225205 27.480378739211798 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 205.0 1 228.0 2 251.0 3 2814.5 4 5378.0 5 3684.0 6 1990.0 7 1956.0 8 1922.0 9 1891.5 10 1861.0 11 1802.0 12 1743.0 13 1687.0 14 1631.0 15 1589.5 16 1548.0 17 1454.0 18 1360.0 19 1273.5 20 1187.0 21 1169.0 22 1151.0 23 1168.5 24 1186.0 25 1367.5 26 1804.0 27 2059.0 28 2194.0 29 2329.0 30 2725.5 31 3122.0 32 3654.0 33 4186.0 34 4374.5 35 4563.0 36 5182.5 37 5802.0 38 6210.0 39 6618.0 40 7246.0 41 7874.0 42 8821.0 43 9768.0 44 10908.0 45 12048.0 46 18072.0 47 24096.0 48 22176.5 49 20257.0 50 19104.0 51 17951.0 52 14558.5 53 11166.0 54 9201.0 55 7236.0 56 6119.0 57 5002.0 58 4279.5 59 3557.0 60 3237.0 61 2917.0 62 2524.5 63 2132.0 64 1726.5 65 1321.0 66 1078.0 67 835.0 68 640.0 69 445.0 70 384.5 71 324.0 72 244.0 73 164.0 74 149.5 75 96.5 76 58.0 77 57.0 78 56.0 79 36.0 80 16.0 81 14.0 82 12.0 83 7.5 84 3.0 85 2.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 179015.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.234086529061805 #Duplication Level Percentage of deduplicated Percentage of total 1 79.07804023211644 42.09647236265118 2 9.033862556009108 9.618188419964808 3 3.6244582725584227 5.7883417590704695 4 2.1249357272526943 4.524760494930592 5 1.4544004533196218 3.8711839789961733 6 1.031512009821925 3.294695975197609 7 0.7859638813393915 2.928804848755691 8 0.5939326526543334 2.5293969779068792 9 0.4837508001301195 2.31768287573667 >10 1.731429111094788 13.406697762757311 >50 0.028332476363369257 1.0110884562746139 >100 0.02413507245768492 3.3086612853671484 >500 0.0010493509764210834 0.3765047621707678 >1k 0.004197403905684334 4.927520040220093 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3270 1.8266625701756836 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGC 1931 1.078680557495182 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCG 1912 1.0680669217663326 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTC 1708 0.9541099907828954 No Hit GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 674 0.3765047621707678 No Hit CGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTG 465 0.25975476915342294 No Hit GAACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT 420 0.23461721084825296 No Hit CTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGCT 412 0.2301483115940005 No Hit CCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 408 0.2279138619668743 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT 400 0.22344496271262185 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCC 394 0.22009328827193253 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCT 295 0.16479066000055861 No Hit CGTCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCT 292 0.16311482278021397 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGAAGCTT 284 0.15864592352596152 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC 281 0.15697008630561685 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTT 278 0.15529424908527217 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTA 249 0.1390944892886071 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTC 205 0.11451554339021869 No Hit TCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 196 0.1094880317291847 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTT 187 0.10446052006815071 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0011172248135631092 0.0 0.0 0.25081697064491804 0.0 2 0.0011172248135631092 0.0 0.0 1.1105214646817305 0.0 3 0.0011172248135631092 0.0 0.0 1.6914783677345473 0.0 4 0.0011172248135631092 0.0 0.0 2.6651397927547973 0.0 5 0.0011172248135631092 0.0 0.0 5.3179901125604 0.0 6 0.0011172248135631092 0.0 0.0 6.890484037650476 0.0 7 0.0011172248135631092 0.0 0.0 8.540066474876406 0.0 8 0.0011172248135631092 0.0 0.0 10.63262855068011 0.0 9 0.0011172248135631092 0.0 0.0 11.578359355361282 0.0 10 0.0011172248135631092 0.0 0.0 14.231768287573667 0.0 11 0.0011172248135631092 0.0 0.0 16.42097030975058 0.0 12 0.0011172248135631092 0.0 0.0 19.148674692064912 0.0 13 0.0011172248135631092 0.0 0.0 19.968717705220232 0.0 14 0.0011172248135631092 0.0 0.0 20.353043041085943 0.0 15 0.0011172248135631092 0.0 0.0 20.930089657291287 0.0 16 0.0011172248135631092 0.0 0.0 21.96128816021004 0.0 17 0.0011172248135631092 0.0 0.0 23.040527330112003 0.0 18 0.0011172248135631092 0.0 0.0 24.288467446861993 0.0 19 0.0011172248135631092 0.0 0.0 25.15710973940731 0.0 20 0.0011172248135631092 0.0 0.0 25.9145881630031 0.0 21 0.0011172248135631092 0.0 0.0 26.735748400971985 0.0 22 0.0011172248135631092 0.0 0.0 27.580370360025697 0.0 23 0.0011172248135631092 0.0 0.0 28.4221992570455 0.0 24 0.0011172248135631092 0.0 0.0 29.138340362539452 0.0 25 0.0011172248135631092 0.0 0.0 29.76231042091445 0.0 26 0.0011172248135631092 0.0 0.0 30.32259866491635 0.0 27 0.0011172248135631092 0.0 0.0 30.93092757590146 0.0 28 0.0011172248135631092 0.0 0.0 31.51244309136106 0.0 29 0.0011172248135631092 0.0 0.0 32.09507583163422 0.0 30 0.0011172248135631092 0.0 0.0 32.77546574309415 0.0 31 0.0011172248135631092 0.0 0.0 33.40781498757087 0.0 32 0.0011172248135631092 0.0 0.0 34.02452308465771 0.0 33 0.0011172248135631092 0.0 0.0 34.58872161550708 0.0 34 0.0011172248135631092 0.0 0.0 35.1484512471022 0.0 35 0.0011172248135631092 0.0 0.0 35.68360193279893 0.0 36 0.0011172248135631092 0.0 0.0 36.22489735497025 0.0 37 0.0011172248135631092 0.0 0.0 36.75557914141273 0.0 38 0.0011172248135631092 0.0 0.0 37.26279920677038 0.0 39 0.0011172248135631092 0.0 0.0 37.86386615646734 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGGG 20 7.017318E-4 45.000004 3 CACGGGT 20 7.017318E-4 45.000004 17 CAACGAG 20 7.017318E-4 45.000004 14 TCTAGCG 20 7.017318E-4 45.000004 1 GCACCAC 20 7.017318E-4 45.000004 29 TGACCGG 20 7.017318E-4 45.000004 2 AGCGACT 20 7.017318E-4 45.000004 19 GCGATGT 40 6.7593646E-9 45.000004 9 TTACGGG 40 6.7593646E-9 45.000004 3 CGATGCA 20 7.017318E-4 45.000004 10 CGGTAGG 20 7.017318E-4 45.000004 2 CACAACG 20 7.017318E-4 45.000004 12 CCTGCAC 20 7.017318E-4 45.000004 26 CGTTTCT 20 7.017318E-4 45.000004 1 TAGTCGG 20 7.017318E-4 45.000004 2 ACAAGCG 20 7.017318E-4 45.000004 14 GTAGTGG 20 7.017318E-4 45.000004 2 GTAGTCG 20 7.017318E-4 45.000004 1 TGGACGG 25 3.8775757E-5 45.0 2 CCTCGTG 25 3.8775757E-5 45.0 15 >>END_MODULE