##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935388.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 317864 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.851971283316136 33.0 31.0 34.0 30.0 34.0 2 31.88219175496439 33.0 31.0 34.0 30.0 34.0 3 31.926282938615255 33.0 31.0 34.0 30.0 34.0 4 35.637014572269905 37.0 35.0 37.0 33.0 37.0 5 35.660291822917976 37.0 35.0 37.0 33.0 37.0 6 35.64536090906803 37.0 35.0 37.0 33.0 37.0 7 35.83497659376337 37.0 35.0 37.0 35.0 37.0 8 35.74353182493142 37.0 35.0 37.0 35.0 37.0 9 37.52698323811441 39.0 37.0 39.0 35.0 39.0 10 36.93184506581431 39.0 37.0 39.0 32.0 39.0 11 36.960759947650565 39.0 37.0 39.0 33.0 39.0 12 37.04563901542798 39.0 37.0 39.0 33.0 39.0 13 37.10349709309642 39.0 37.0 39.0 33.0 39.0 14 38.25839352679133 40.0 38.0 41.0 33.0 41.0 15 38.34276294264214 40.0 38.0 41.0 34.0 41.0 16 38.22703734930662 40.0 37.0 41.0 33.0 41.0 17 38.18782875695266 40.0 37.0 41.0 33.0 41.0 18 37.93987680265774 39.0 37.0 41.0 33.0 41.0 19 37.72540772154129 39.0 37.0 41.0 33.0 41.0 20 37.61373417562228 39.0 35.0 41.0 33.0 41.0 21 37.56522600860745 39.0 35.0 41.0 33.0 41.0 22 37.62355913220748 39.0 35.0 41.0 33.0 41.0 23 37.67567890670224 39.0 35.0 41.0 33.0 41.0 24 37.70452457654846 39.0 35.0 41.0 34.0 41.0 25 37.40529282963783 39.0 35.0 41.0 33.0 41.0 26 37.5398944202552 39.0 35.0 41.0 33.0 41.0 27 37.50771084488964 39.0 35.0 41.0 33.0 41.0 28 37.16990285153399 39.0 35.0 41.0 33.0 41.0 29 36.939291646742 39.0 35.0 41.0 32.0 41.0 30 36.802531900435405 39.0 35.0 41.0 31.0 41.0 31 36.772025142828376 39.0 35.0 41.0 31.0 41.0 32 36.599555155664056 39.0 35.0 41.0 31.0 41.0 33 36.10602018473309 39.0 35.0 41.0 28.0 41.0 34 35.74132018724989 39.0 35.0 41.0 25.0 41.0 35 35.55153776457856 39.0 35.0 41.0 23.0 41.0 36 35.37516673797599 39.0 35.0 41.0 23.0 41.0 37 35.28545541489442 39.0 35.0 41.0 22.0 41.0 38 35.10027873555986 39.0 35.0 41.0 21.0 41.0 39 35.002595449626256 39.0 35.0 41.0 20.0 41.0 40 34.941116326479246 39.0 35.0 41.0 20.0 41.0 41 34.78237862733748 39.0 35.0 41.0 19.0 41.0 42 34.81458107870032 39.0 35.0 41.0 19.0 41.0 43 34.68506342335087 39.0 35.0 41.0 18.0 41.0 44 34.61290363174188 39.0 34.0 41.0 18.0 41.0 45 34.640434273777466 39.0 34.0 41.0 20.0 41.0 46 34.445523871844564 39.0 34.0 40.0 18.0 41.0 47 34.47542345153902 38.0 34.0 40.0 19.0 41.0 48 34.38225467495533 38.0 34.0 40.0 18.0 41.0 49 34.13343757078499 38.0 34.0 40.0 15.0 41.0 50 33.97104107417009 38.0 34.0 40.0 15.0 41.0 51 32.86477550147233 37.0 31.0 40.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 3.0 11 1.0 12 2.0 13 1.0 14 7.0 15 14.0 16 16.0 17 61.0 18 110.0 19 245.0 20 457.0 21 783.0 22 1165.0 23 1719.0 24 2687.0 25 4486.0 26 6984.0 27 8201.0 28 7693.0 29 6962.0 30 6777.0 31 7073.0 32 8266.0 33 10556.0 34 16101.0 35 20222.0 36 22812.0 37 32480.0 38 60801.0 39 91134.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.02810006795359 20.255832683160094 22.814474114715726 19.90159313417059 2 36.82046409785317 25.28219615936375 23.11774847104422 14.779591271738857 3 27.43846424886115 24.20060151511338 34.471031636171446 13.889902599854025 4 23.916203156066747 23.782498175320264 36.24820678025822 16.053091888354768 5 23.409697229003598 27.181436085873205 32.78068607958121 16.628180605541992 6 21.849596053658168 32.887335464223696 32.598847305765986 12.66422117635215 7 71.87948304935445 5.437231017038734 18.61959831877784 4.063687614828983 8 73.32538444114464 6.001623335766239 16.701796994941233 3.971195228147887 9 67.10668713663705 8.048410641028868 18.48432033825787 6.360581884076209 10 31.14602471497244 31.934097601489945 24.724095839730197 12.195781843807413 11 22.378753177459544 26.186671029119374 35.406651901442125 16.02792389197896 12 21.265383937784712 21.112488359801677 39.523821508569704 18.098306193843907 13 22.504278559383888 22.260778194447937 38.88832960008054 16.346613646087636 14 17.09661993808673 28.43448770543377 36.8563284926887 17.612563863790804 15 16.494790224750208 25.561875519089927 41.25852565877231 16.684808597387562 16 18.467331940704202 26.970968716180504 36.0540986082098 18.507600734905495 17 19.451400598998315 25.112626783781742 34.0038507034455 21.432121913774445 18 22.100961417461555 24.568054262200185 34.87655097777666 18.4544333425616 19 21.795799461404876 25.788702086426902 33.650869554274784 18.76462889789344 20 20.739058213575618 25.10287418518612 34.55974882339617 19.598318777842096 21 22.006896031006974 26.34491480633227 35.323282913447265 16.324906249213498 22 18.87316588226411 25.82142048171545 34.994525960788266 20.310887675232177 23 17.63143986107266 25.462147333450787 35.36449550751264 21.54191729796391 24 17.95736541413938 24.477134875292577 35.390921903707245 22.174577806860796 25 17.842221830720057 27.808748395540235 33.73738454181663 20.611645231923088 26 17.646540658898143 26.110852440037245 33.901605718168774 22.34100118289583 27 19.48852339365263 25.67827750232804 34.05041149674074 20.782787607278586 28 19.661553368736314 25.69495129992701 36.49485314474114 18.148642186595527 29 19.222057232023758 24.158445121183902 37.53083079556036 19.088666851231974 30 22.054715224121008 25.467495532680644 34.61826441496992 17.859524828228423 31 20.020197317091586 28.46437470113004 32.481816122618476 19.033611859159894 32 19.720383560264768 29.600709737497798 32.65578989756626 18.02311680467118 33 20.688093020914604 26.965305916995945 33.16009362494652 19.18650743714293 34 21.00174917574812 26.92440792288526 32.03351118717439 20.040331714192234 35 19.059409055445094 27.961014773613872 31.24480910074749 21.73476707019354 36 19.825774545088464 28.399567110462336 31.791269222057235 19.983389122391966 37 19.400120806382603 30.648642186595527 30.397276822792136 19.553960184229734 38 19.405469005612463 28.907331437344276 29.487768353761357 22.199431203281907 39 22.138713412025268 27.59639342611935 29.329839176503157 20.935053985352226 40 22.8704729066519 25.69211990033474 30.785807766843682 20.651599426169685 41 19.12169984647522 27.128583293484006 30.659338585055245 23.09037827498553 42 20.62706062970327 27.40134145420683 30.80248156444265 21.169116351647247 43 19.869189338836733 28.5883270832809 30.445096015906177 21.09738756197619 44 19.50802859084388 27.566191830468377 29.952117886895024 22.973661691792717 45 19.614363375531674 26.087572043389624 29.77908791181134 24.51897666926736 46 20.28697807867516 28.172111343215967 29.240807389323738 22.30010318878514 47 18.856806684619837 25.23846676566078 32.06465658268945 23.840069967029926 48 18.976983867314324 25.611267711977447 31.561611255127982 23.85013716558025 49 20.309629275413386 25.14031157979513 32.65547529761156 21.894583847179927 50 18.876626481765786 24.440326680592957 34.284473863035764 22.39857297460549 51 20.036241914781165 24.352867893187025 31.31307729091687 24.29781290111494 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 210.0 1 290.0 2 370.0 3 5150.0 4 9930.0 5 6781.5 6 3633.0 7 3492.5 8 3352.0 9 3340.0 10 3328.0 11 3185.0 12 3042.0 13 2967.0 14 2892.0 15 2738.5 16 2585.0 17 2365.5 18 2146.0 19 2058.5 20 1971.0 21 1994.0 22 2017.0 23 2131.5 24 2246.0 25 2482.0 26 3071.5 27 3425.0 28 4027.0 29 4629.0 30 5625.5 31 6622.0 32 7412.5 33 8203.0 34 9223.5 35 10244.0 36 11124.0 37 12004.0 38 12444.0 39 12884.0 40 14378.0 41 15872.0 42 16912.5 43 17953.0 44 19633.5 45 21314.0 46 26767.0 47 32220.0 48 30641.0 49 29062.0 50 27582.5 51 26103.0 52 22128.5 53 18154.0 54 16168.5 55 14183.0 56 13068.0 57 11953.0 58 11063.0 59 10173.0 60 9466.0 61 8759.0 62 7338.0 63 5917.0 64 4882.5 65 3848.0 66 2763.5 67 1679.0 68 1322.5 69 966.0 70 744.5 71 523.0 72 441.0 73 359.0 74 283.5 75 143.5 76 79.0 77 60.0 78 41.0 79 33.5 80 26.0 81 20.0 82 14.0 83 9.0 84 4.0 85 2.5 86 1.0 87 1.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 317864.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.877173796645046 #Duplication Level Percentage of deduplicated Percentage of total 1 77.57791310396586 37.14211228459601 2 8.26561262682655 7.914683445406371 3 3.48205035037798 5.001321893811459 4 2.1870858301076335 4.188459535849715 5 1.558225448933307 3.7301715316467594 6 1.1844082088894703 3.402367059790454 7 0.9721011442133446 3.257901880059387 8 0.7901461475608962 3.0263971545218054 9 0.6710705479793445 2.891606512987522 >10 3.2698723970084402 23.04433275631951 >50 0.02240448572484592 0.7713712211924245 >100 0.013179109249909364 1.3354660038067618 >500 0.002635821849981873 0.8243734155320266 >1k 0.002635821849981873 1.688498476818755 >5k 6.589554624954683E-4 1.7809368276610373 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5645 1.7759167442679888 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC 2215 0.6968388996551985 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTT 1068 0.33599275161704373 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC 1057 0.33253215211537007 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG 1012 0.3183751541539778 No Hit CGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTG 837 0.2633201620818966 No Hit GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 760 0.23909596557018095 No Hit GAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 513 0.16138977675987215 No Hit CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 503 0.15824377721289606 No Hit CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT 494 0.15541237762061763 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTT 369 0.11608738328341682 No Hit CGTCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 365 0.11482898346462639 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT 318 0.10004278559383886 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1459995469760655E-4 0.0 0.0 0.1679963758085219 0.0 2 3.1459995469760655E-4 0.0 0.0 0.6965242997005009 0.0 3 3.1459995469760655E-4 0.0 0.0 1.1744016308861651 0.0 4 3.1459995469760655E-4 0.0 0.0 1.7387939496136713 0.0 5 3.1459995469760655E-4 0.0 0.0 3.243525532932323 0.0 6 3.1459995469760655E-4 0.0 0.0 4.524891148415675 0.0 7 3.1459995469760655E-4 0.0 0.0 5.353862029043868 0.0 8 3.1459995469760655E-4 0.0 0.0 6.461883069488838 0.0 9 3.1459995469760655E-4 0.0 0.0 6.961467797548637 0.0 10 6.291999093952131E-4 0.0 0.0 8.10315103314625 0.0 11 6.291999093952131E-4 0.0 0.0 9.044119497646792 0.0 12 6.291999093952131E-4 0.0 0.0 10.244947524727557 0.0 13 6.291999093952131E-4 0.0 0.0 10.812800442956735 0.0 14 6.291999093952131E-4 0.0 0.0 11.14092819570634 0.0 15 6.291999093952131E-4 0.0 0.0 11.431618553846928 0.0 16 6.291999093952131E-4 0.0 0.0 11.875519089925252 0.0 17 6.291999093952131E-4 0.0 0.0 12.473259003850703 0.0 18 6.291999093952131E-4 0.0 0.0 13.20596229834143 0.0 19 6.291999093952131E-4 0.0 0.0 13.653323433921425 0.0 20 6.291999093952131E-4 0.0 0.0 14.069224574031661 0.0 21 6.291999093952131E-4 0.0 0.0 14.519417109203935 0.0 22 6.291999093952131E-4 0.0 0.0 15.01585583771676 0.0 23 6.291999093952131E-4 0.0 0.0 15.459756373795082 0.0 24 6.291999093952131E-4 0.0 0.0 15.819029522059749 0.0 25 6.291999093952131E-4 0.0 0.0 16.19749326756097 0.0 26 6.291999093952131E-4 0.0 0.0 16.58633881156721 0.0 27 6.291999093952131E-4 0.0 0.0 16.97424055570936 0.0 28 6.291999093952131E-4 0.0 0.0 17.316839906375055 0.0 29 6.291999093952131E-4 0.0 0.0 17.689011652782323 0.0 30 6.291999093952131E-4 0.0 0.0 18.14046258777339 0.0 31 6.291999093952131E-4 0.0 0.0 18.534970930964185 0.0 32 6.291999093952131E-4 0.0 0.0 18.9537034706667 0.0 33 6.291999093952131E-4 0.0 0.0 19.43346840158055 0.0 34 6.291999093952131E-4 0.0 0.0 19.9528729267863 0.0 35 6.291999093952131E-4 0.0 0.0 20.40369466186797 0.0 36 6.291999093952131E-4 0.0 0.0 20.803551204288627 0.0 37 6.291999093952131E-4 0.0 0.0 21.17792515037878 0.0 38 6.291999093952131E-4 0.0 0.0 21.580298492437016 0.0 39 6.291999093952131E-4 0.0 0.0 22.044648025570684 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTGCG 35 1.2082273E-7 45.000004 1 ACGCGAG 20 7.025578E-4 45.0 1 CGTTGCG 20 7.025578E-4 45.0 2 GTTAGCG 20 7.025578E-4 45.0 1 TCTAGCG 20 7.025578E-4 45.0 1 GTATGCG 20 7.025578E-4 45.0 1 ATTTGCG 20 7.025578E-4 45.0 1 TGCGTAG 20 7.025578E-4 45.0 1 GTACGAG 20 7.025578E-4 45.0 1 CGTTTTT 3520 0.0 43.977272 1 ACGGGAA 195 0.0 41.538464 5 AAGGGCG 55 6.002665E-11 40.909092 5 ATTGCGG 40 3.4477125E-7 39.375 2 GTTTTTT 3995 0.0 38.917397 2 CGCATGG 35 6.234035E-6 38.57143 2 ACGGGTC 35 6.234035E-6 38.57143 5 CGTTTCT 70 0.0 38.57143 1 CGATAGA 35 6.234035E-6 38.57143 10 AGACGGG 100 0.0 38.25 3 GACGTAG 30 1.13806454E-4 37.500004 1 >>END_MODULE