##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935385.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 779796 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.863157800245194 33.0 31.0 34.0 30.0 34.0 2 31.91335041472385 33.0 31.0 34.0 30.0 34.0 3 32.00039369270937 33.0 31.0 34.0 30.0 34.0 4 35.72803143386219 37.0 35.0 37.0 33.0 37.0 5 35.74844959450933 37.0 35.0 37.0 35.0 37.0 6 35.699981790109206 37.0 35.0 37.0 35.0 37.0 7 35.98626179154548 37.0 35.0 37.0 35.0 37.0 8 35.82295113080857 37.0 35.0 37.0 35.0 37.0 9 37.675102206218035 39.0 37.0 39.0 35.0 39.0 10 36.94317744640906 39.0 37.0 39.0 32.0 39.0 11 36.87229865246808 39.0 37.0 39.0 33.0 39.0 12 37.02577725456401 39.0 37.0 39.0 33.0 39.0 13 37.037055845374944 39.0 37.0 39.0 33.0 39.0 14 38.121571539223076 40.0 37.0 41.0 33.0 41.0 15 38.23432154050546 40.0 38.0 41.0 33.0 41.0 16 38.16012136507497 40.0 37.0 41.0 33.0 41.0 17 38.14166012649462 40.0 37.0 41.0 33.0 41.0 18 38.0622290958148 40.0 37.0 41.0 33.0 41.0 19 37.9567630508492 40.0 37.0 41.0 33.0 41.0 20 38.0136240760404 40.0 37.0 41.0 33.0 41.0 21 37.98092065104207 40.0 37.0 41.0 33.0 41.0 22 38.0892784779609 40.0 37.0 41.0 34.0 41.0 23 38.07627764184479 40.0 37.0 41.0 34.0 41.0 24 38.04977455642245 40.0 37.0 41.0 34.0 41.0 25 37.83715228085294 40.0 36.0 41.0 33.0 41.0 26 37.91454431671873 40.0 37.0 41.0 33.0 41.0 27 37.920892130762404 40.0 37.0 41.0 33.0 41.0 28 37.84377196087182 40.0 37.0 41.0 33.0 41.0 29 37.83059159062114 40.0 37.0 41.0 33.0 41.0 30 37.68251824836239 40.0 36.0 41.0 33.0 41.0 31 37.703644286454406 40.0 37.0 41.0 33.0 41.0 32 37.665930576714935 40.0 37.0 41.0 33.0 41.0 33 37.569655397052564 40.0 37.0 41.0 33.0 41.0 34 37.56452969751063 40.0 37.0 41.0 33.0 41.0 35 37.516514575606955 40.0 37.0 41.0 33.0 41.0 36 37.433514662809245 40.0 37.0 41.0 33.0 41.0 37 37.39490456478361 40.0 37.0 41.0 33.0 41.0 38 37.33346541916091 40.0 36.0 41.0 32.0 41.0 39 37.28879476170691 40.0 36.0 41.0 32.0 41.0 40 37.17362489676787 40.0 36.0 41.0 32.0 41.0 41 37.06742147946386 40.0 36.0 41.0 31.0 41.0 42 37.114719747215936 40.0 36.0 41.0 32.0 41.0 43 37.04465142165387 40.0 36.0 41.0 32.0 41.0 44 36.924514873120664 40.0 35.0 41.0 31.0 41.0 45 36.9052175184279 39.0 35.0 41.0 31.0 41.0 46 36.79463090346706 39.0 35.0 41.0 31.0 41.0 47 36.71089746549097 39.0 35.0 41.0 31.0 41.0 48 36.63193963549441 39.0 35.0 41.0 31.0 41.0 49 36.566525091177695 39.0 35.0 41.0 31.0 41.0 50 36.42673211968258 39.0 35.0 41.0 31.0 41.0 51 35.260319365577665 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 11.0 11 11.0 12 17.0 13 27.0 14 26.0 15 35.0 16 49.0 17 99.0 18 159.0 19 342.0 20 644.0 21 1012.0 22 1544.0 23 2225.0 24 3226.0 25 4665.0 26 6323.0 27 7054.0 28 7727.0 29 8837.0 30 10832.0 31 13931.0 32 18282.0 33 25330.0 34 41805.0 35 50413.0 36 58177.0 37 88791.0 38 170785.0 39 257324.0 40 84.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.83915793361341 20.61000569379684 24.536288978143002 11.014547394446753 2 32.456693801968726 25.92588317970341 24.763656135707286 16.853766882620583 3 31.444377760337318 25.40023288142027 26.77533611354764 16.380053244694768 4 27.51719680531831 25.23057312425301 29.047084109177273 18.205145961251404 5 26.6960846170024 29.099661962872343 25.148500377021684 19.055753043103582 6 25.527958594299022 35.69831084027105 24.98255954121334 13.79117102421659 7 79.80125571303263 5.273430486947869 10.671252481418216 4.254061318601275 8 81.43129741624733 6.413856957460669 8.078394862246023 4.0764507640459815 9 75.51551944354678 7.3757752027453325 9.653037461079563 7.455667892628329 10 36.29949371374052 33.583911689723976 17.05022852130557 13.066366075229933 11 25.616827990910444 27.211732299216717 29.039646266459435 18.131793443413404 12 23.652596320063196 24.486147659131362 31.9714386839635 19.889817336841944 13 23.473446901497315 25.236600341627813 33.455031828837285 17.83492092803759 14 20.384818593580885 29.304074398945367 30.099282376416397 20.211824631057354 15 19.2122042175133 28.43371856229065 33.239206151352406 19.114871068843648 16 22.183237667287344 27.659798203632747 30.184817567671544 19.97214656140837 17 22.752745589872223 26.847149767375058 29.77060667148844 20.62949797126428 18 22.16387362848745 26.86523141949946 30.40500335985309 20.56589159216 19 22.425865226289954 28.572472800578613 28.590810930038113 20.410851043093324 20 23.773781860896953 27.911274230696232 29.93795813263982 18.376985775766997 21 23.46177718275036 28.239180503618893 30.036701906652507 18.262340406978236 22 22.14450958968756 25.408055440140753 30.332676751355482 22.114758218816203 23 20.97343407763056 28.38614201662999 30.44514206279591 20.195281842943537 24 21.404316000595028 27.148510636115088 29.97578853956676 21.471384823723128 25 21.507291650636834 29.71943944313641 28.154158267033942 20.619110639192815 26 21.061790519571787 28.43615509697408 29.028104786380027 21.473949597074107 27 21.517935460043397 28.509251137476983 29.5496514473016 20.42316195517802 28 19.940728087858876 28.147233378986297 30.733550826113497 21.17848770704133 29 21.964590739116385 26.981415652298807 29.272655925395874 21.781337683188937 30 21.503444490610367 28.450133111736914 29.650318801327526 20.396103596325194 31 21.962795397770698 27.736228449491918 28.122355077481803 22.17862107525558 32 22.083339745266713 28.818819280940144 28.037461079564395 21.06037989422875 33 21.186310265761815 28.384218436616752 27.961672027042972 22.46779927057846 34 21.39046622449974 27.246997932792677 30.205079277144282 21.1574565655633 35 20.740039702691472 27.85933757033891 29.178785220750044 22.221837506219575 36 22.562182929894487 28.3788324125797 28.00476021933942 21.0542244381864 37 20.508825385100717 28.60209593278242 29.382171747482676 21.506906934634188 38 20.31698033844749 28.95423931387183 27.804451420627956 22.924328927052716 39 21.59782814992639 26.846123858034666 28.666599982559543 22.889448009479402 40 21.610652016681286 27.06643788888376 30.967714633057874 20.35519546137708 41 21.167202704297022 27.2808529410256 29.699562449666324 21.852381905011054 42 21.49793022790576 27.168131152250076 29.90730909109562 21.426629528748546 43 22.48485501336247 27.04463731540044 28.201350096691957 22.269157574545137 44 21.084873479730597 26.987827585676254 28.838696274410232 23.088602660182918 45 20.752350614776173 26.11490697567056 28.73918306839225 24.393559341161023 46 22.317118836208444 27.29226618243746 28.62364002893064 21.766974952423453 47 20.407388599069503 26.98975116568949 31.271640275148886 21.331219960092128 48 20.807749719157318 27.214040595232596 28.98501659408358 22.9931930915265 49 20.840194102047203 26.479104791509574 30.643142565491488 22.037558540951736 50 20.470482023503582 26.00385228957317 30.498361109828725 23.027304577094522 51 20.367634612129326 25.802389342853772 29.01976927298935 24.810206772027556 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 409.0 1 674.0 2 939.0 3 2952.5 4 4966.0 5 3429.0 6 1892.0 7 1867.5 8 1843.0 9 1900.5 10 1958.0 11 1960.0 12 1962.0 13 2003.5 14 2045.0 15 2053.5 16 2062.0 17 2028.0 18 1994.0 19 2132.0 20 2270.0 21 2743.5 22 3217.0 23 3725.0 24 4233.0 25 5074.5 26 7216.0 27 8516.0 28 10529.5 29 12543.0 30 14343.0 31 16143.0 32 18360.0 33 20577.0 34 24147.0 35 27717.0 36 30713.5 37 33710.0 38 35094.0 39 36478.0 40 40866.5 41 45255.0 42 47796.5 43 50338.0 44 53918.5 45 57499.0 46 69807.5 47 82116.0 48 78655.5 49 75195.0 50 72838.0 51 70481.0 52 60975.0 53 51469.0 54 45196.0 55 38923.0 56 34933.0 57 30943.0 58 27652.5 59 24362.0 60 22598.5 61 20835.0 62 17816.0 63 14797.0 64 12287.5 65 9778.0 66 7792.5 67 5807.0 68 4897.0 69 3987.0 70 3315.5 71 2644.0 72 2191.0 73 1738.0 74 1395.5 75 855.0 76 657.0 77 461.5 78 266.0 79 215.0 80 164.0 81 99.0 82 34.0 83 32.0 84 30.0 85 18.5 86 7.0 87 10.0 88 13.0 89 8.0 90 3.0 91 2.5 92 2.0 93 2.5 94 3.0 95 5.0 96 7.0 97 3.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 779796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.6075712312711 #Duplication Level Percentage of deduplicated Percentage of total 1 71.75942133382244 23.39900442657411 2 8.878254151126464 5.789966092843691 3 3.5231933028694487 3.4464832975455857 4 2.1001515173169047 2.739233607894922 5 1.6867458504318473 2.750034273350371 6 1.2927366857219247 2.529180213777299 7 1.0773731819616308 2.459136594143255 8 0.9694237739435354 2.528844380972119 9 0.8924901474008886 2.619174244912391 >10 7.717268897593958 45.2030993292309 >50 0.06902184980854331 1.5075395395616105 >100 0.027608739071750474 1.580974501562465 >500 0.0035496950235107687 0.8131865104839711 >1k 0.002760873907175042 2.63414298714735 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 4485 0.5751504239570349 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 4355 0.5584793971756716 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 4240 0.5437319504075425 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2889 0.3704815105489128 No Hit GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 2249 0.28840876331758564 TruSeq Adapter, Index 27 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 1216 0.15593821973952163 TruSeq Adapter, Index 27 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGCT 1048 0.13439412359129824 TruSeq Adapter, Index 20 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 920 0.1179795741450328 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTT 826 0.10592513939543162 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCT 794 0.10182150203386527 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.129546701957948E-4 0.0 0.0 0.14593560367070363 0.0 2 5.129546701957948E-4 0.0 0.0 0.7827688267187829 0.0 3 5.129546701957948E-4 0.0 0.0 1.1142657823328153 0.0 4 5.129546701957948E-4 0.0 0.0 1.6017009576863692 0.0 5 5.129546701957948E-4 0.0 0.0 2.9684686764230643 0.0 6 5.129546701957948E-4 0.0 0.0 3.6254353702763287 0.0 7 5.129546701957948E-4 0.0 0.0 4.163524819311718 0.0 8 5.129546701957948E-4 0.0 0.0 4.869735161503778 0.0 9 5.129546701957948E-4 0.0 0.0 5.088638567009833 0.0 10 5.129546701957948E-4 0.0 0.0 6.187259231901677 0.0 11 5.129546701957948E-4 0.0 0.0 6.98708380140447 0.0 12 7.694320052936921E-4 0.0 0.0 8.173419714899794 0.0 13 7.694320052936921E-4 0.0 0.0 8.4595201822015 0.0 14 7.694320052936921E-4 0.0 0.0 8.593273112455053 0.0 15 7.694320052936921E-4 0.0 0.0 8.871038066366076 0.0 16 7.694320052936921E-4 0.0 0.0 9.309742548051029 0.0 17 7.694320052936921E-4 0.0 0.0 9.875916265279637 0.0 18 7.694320052936921E-4 0.0 0.0 10.458248054619414 0.0 19 7.694320052936921E-4 0.0 0.0 10.951582208680218 0.0 20 7.694320052936921E-4 0.0 0.0 11.328603891274128 0.0 21 7.694320052936921E-4 0.0 0.0 11.7833382064027 0.0 22 7.694320052936921E-4 0.0 0.0 12.345921240939939 0.0 23 7.694320052936921E-4 0.0 0.0 12.902348819434826 0.0 24 7.694320052936921E-4 0.0 0.0 13.328101195697336 0.0 25 7.694320052936921E-4 0.0 0.0 13.72782112244741 0.0 26 7.694320052936921E-4 0.0 0.0 14.092147176953972 0.0 27 7.694320052936921E-4 0.0 0.0 14.483659828980914 0.0 28 7.694320052936921E-4 0.0 0.0 14.865298103606584 0.0 29 7.694320052936921E-4 0.0 0.0 15.278354851781748 0.0 30 7.694320052936921E-4 0.0 0.0 15.75386383105325 0.0 31 7.694320052936921E-4 0.0 0.0 16.205776895495745 0.0 32 7.694320052936921E-4 0.0 0.0 16.627938589066883 0.0 33 7.694320052936921E-4 0.0 0.0 17.046509599946653 0.0 34 7.694320052936921E-4 0.0 0.0 17.465080610826423 0.0 35 7.694320052936921E-4 0.0 0.0 17.923149131311266 0.0 36 7.694320052936921E-4 0.0 0.0 18.347875598233383 0.0 37 8.976706728426409E-4 0.0 0.0 18.779655191870695 0.0 38 8.976706728426409E-4 0.0 0.0 19.213999558858983 0.0 39 8.976706728426409E-4 0.0 0.0 19.689636776798036 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 30 2.1645992E-6 45.000004 1 GCGAACC 20 7.031888E-4 45.000004 33 CGCATCG 35 1.2112469E-7 45.000004 21 CGTCTCG 25 3.889647E-5 45.000004 42 CGTACTC 20 7.031888E-4 45.000004 42 TAGTACG 20 7.031888E-4 45.000004 1 CGTTTTT 1575 0.0 41.42857 1 TACGGCT 545 0.0 40.871563 7 CGGTCTA 95 0.0 40.26316 31 TAGCACG 40 3.4563163E-7 39.375004 1 CATCGCC 40 3.4563163E-7 39.375004 23 ATAACGC 40 3.4563163E-7 39.375004 11 GCATCGC 40 3.4563163E-7 39.375004 22 CGAACGT 35 6.245704E-6 38.57143 15 TATGCGA 35 6.245704E-6 38.57143 11 GTATGCG 35 6.245704E-6 38.57143 1 ACGTAGG 70 0.0 38.57143 2 TATAACG 35 6.245704E-6 38.57143 1 CTAACGG 60 1.546141E-10 37.500004 2 CGTCACG 30 1.139585E-4 37.500004 37 >>END_MODULE