##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935384.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 560627 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.91944376564097 33.0 31.0 34.0 30.0 34.0 2 31.968014383895174 33.0 31.0 34.0 30.0 34.0 3 32.04450374313046 33.0 31.0 34.0 30.0 34.0 4 35.76419437522631 37.0 35.0 37.0 33.0 37.0 5 35.79020632256385 37.0 35.0 37.0 35.0 37.0 6 35.7415625719061 37.0 35.0 37.0 35.0 37.0 7 36.02620458879076 37.0 35.0 37.0 35.0 37.0 8 35.88468803678738 37.0 35.0 37.0 35.0 37.0 9 37.72514167173539 39.0 38.0 39.0 35.0 39.0 10 36.956058127774796 39.0 37.0 39.0 32.0 39.0 11 36.925007179461566 39.0 37.0 39.0 33.0 39.0 12 37.01802267817997 39.0 37.0 39.0 33.0 39.0 13 37.032246038810115 39.0 37.0 39.0 33.0 39.0 14 38.108954795256025 40.0 37.0 41.0 33.0 41.0 15 38.25738146753545 40.0 38.0 41.0 34.0 41.0 16 38.155199446334194 40.0 37.0 41.0 33.0 41.0 17 38.1827864159236 40.0 37.0 41.0 34.0 41.0 18 38.089380283147264 40.0 37.0 41.0 33.0 41.0 19 37.993735585335706 40.0 37.0 41.0 34.0 41.0 20 38.07100086153539 40.0 37.0 41.0 34.0 41.0 21 38.010861053784424 40.0 37.0 41.0 34.0 41.0 22 38.10127589288422 40.0 37.0 41.0 34.0 41.0 23 38.118319310343594 40.0 37.0 41.0 34.0 41.0 24 38.09011160718267 40.0 37.0 41.0 34.0 41.0 25 37.84881570099193 40.0 36.0 41.0 33.0 41.0 26 37.91269239619212 40.0 37.0 41.0 34.0 41.0 27 37.93725953263043 40.0 37.0 41.0 34.0 41.0 28 37.8587795450451 40.0 36.0 41.0 33.0 41.0 29 37.85958578520121 40.0 36.0 41.0 33.0 41.0 30 37.695291165070536 40.0 36.0 41.0 33.0 41.0 31 37.68807781287737 40.0 36.0 41.0 33.0 41.0 32 37.656580935274256 40.0 36.0 41.0 33.0 41.0 33 37.58238543630613 40.0 36.0 41.0 33.0 41.0 34 37.531051840171806 40.0 36.0 41.0 33.0 41.0 35 37.49086826000175 40.0 36.0 41.0 33.0 41.0 36 37.42719312484058 40.0 36.0 41.0 33.0 41.0 37 37.352639098723394 40.0 36.0 41.0 33.0 41.0 38 37.28317758509669 40.0 36.0 41.0 32.0 41.0 39 37.24691461524329 40.0 36.0 41.0 32.0 41.0 40 37.14996958762243 40.0 36.0 41.0 32.0 41.0 41 37.0782962647179 40.0 35.0 41.0 32.0 41.0 42 37.09100168204528 40.0 35.0 41.0 32.0 41.0 43 37.0262028050736 40.0 35.0 41.0 32.0 41.0 44 36.880446357382006 39.0 35.0 41.0 31.0 41.0 45 36.84958983423916 39.0 35.0 41.0 31.0 41.0 46 36.774506044125594 39.0 35.0 41.0 31.0 41.0 47 36.735007411344796 39.0 35.0 41.0 31.0 41.0 48 36.64362044639306 39.0 35.0 41.0 31.0 41.0 49 36.56542406983609 39.0 35.0 41.0 31.0 41.0 50 36.45312123747161 39.0 35.0 41.0 31.0 41.0 51 35.35580519668157 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 5.0 10 6.0 11 10.0 12 20.0 13 10.0 14 26.0 15 33.0 16 31.0 17 70.0 18 135.0 19 243.0 20 399.0 21 646.0 22 976.0 23 1490.0 24 2159.0 25 3134.0 26 4295.0 27 5001.0 28 5498.0 29 6329.0 30 7561.0 31 9887.0 32 12875.0 33 18184.0 34 32240.0 35 37783.0 36 41279.0 37 64297.0 38 121689.0 39 184230.0 40 80.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.92818576343986 21.448842100005887 24.59888660374902 11.024085532805234 2 33.72598893738618 24.09516487789564 24.860201167621252 17.31864501709693 3 32.50004013363609 23.789079013319018 27.150494000467333 16.56038685257756 4 28.634546677202486 25.87834692228523 26.561332222672114 18.925774177840168 5 25.441871333346416 29.955210862124016 25.600265417113338 19.002652387416234 6 26.602536089057434 34.95425657344366 24.715006590834903 13.728200746664005 7 81.0392649658329 5.7813840574927715 8.791585135928166 4.387765840746165 8 82.92090819742896 5.137818906331661 7.92862277414395 4.012650122095439 9 77.05961361118891 7.485547431714848 9.65151517854117 5.803323778555082 10 37.27380236770616 31.455852108442866 17.709100703319677 13.561244820531298 11 27.995975934088086 26.767708298030595 26.596471450715004 18.639844317166315 12 25.609540746342933 24.081251884051248 31.116945848130754 19.19226152147506 13 23.966202127261084 25.362852663178902 31.58980926712413 19.081135942435882 14 20.78262374091865 28.996284517156685 29.821432075158704 20.39965966676596 15 20.4538846684159 28.0776701799949 32.315068664192054 19.153376487397146 16 23.485133609333836 26.49016190800657 31.107313775469255 18.917390707190343 17 23.710238714867458 25.983586234697935 28.684134014237628 21.622041036196972 18 23.533650716073254 27.207751321288487 29.7042418577771 19.554356104861164 19 23.952467505132645 28.204492470038012 27.98955455231375 19.853485472515594 20 24.723568433200686 27.950134403087972 28.56569519484434 18.760601968867 21 24.87304393116992 26.81444168761048 29.415279677932027 18.89723470328757 22 22.873140251896537 25.656452507638765 29.413317589056536 22.057089651408155 23 22.093655853178674 27.61622255082256 29.363551880305444 20.926569715693322 24 22.146988996248844 27.181887422475192 29.890461929232803 20.780661652043158 25 22.86386492266694 27.886455700492483 28.19628737110414 21.053392005736434 26 21.523044733842646 28.366989103271873 28.501838120532902 21.608128042352583 27 21.919029943259957 27.869510387476883 29.7377757403764 20.473683928886764 28 20.2919231503299 27.8324090705585 30.595922065829868 21.279745713281738 29 21.990913744789317 27.75339040039099 29.31967243818082 20.93602341663887 30 22.019453219341916 27.444628960075057 29.6687458863023 20.867171934280726 31 22.361035055393337 28.88373196438987 27.44427221664315 21.310960763573643 32 23.026183184184852 29.28399809499007 27.492254208234705 20.19756451259037 33 22.75416631735539 28.35807051747419 27.666166631289606 21.221596533880817 34 21.59243133134865 27.853456933041045 28.494346508462847 22.059765227147462 35 22.21494862002722 28.111739177742063 27.98491688769895 21.688395314531768 36 23.516527031341695 28.359140747769906 27.456579865043963 20.66775235584444 37 21.561573024488652 29.145938386841873 28.339519859014995 20.952968729654476 38 21.61722499986622 29.510530174251333 26.927529355525152 21.944715470357295 39 21.76331143523234 28.71213837364237 27.282132326841197 22.242417864284096 40 22.87028630444128 27.428397133923266 29.370330005511686 20.33098655612377 41 21.49093782497097 28.04645512970299 28.525026443606887 21.937580601719148 42 22.56081137726153 27.55432756538661 28.348081701380774 21.536779355971085 43 22.130757170097052 27.36132936872466 27.96333391006855 22.544579551109738 44 21.118140938627644 27.514193929297022 28.92422234391137 22.443442788163967 45 22.260968522743283 27.130694739996468 27.31673643973622 23.291600297524024 46 22.24883924605843 28.094615493010505 27.51615601817251 22.140389242758555 47 21.32701421800948 27.555932910830194 29.50589250963653 21.611160361523794 48 21.09406075697389 27.572699852129844 28.70125769896919 22.631981691927074 49 21.846967770014643 27.18973577797716 28.94170277207484 22.02159367993336 50 20.52683870024098 27.004407565101218 29.302192010017357 23.16656172464045 51 20.542713782960863 26.683338476384478 28.306521091563553 24.467426649091106 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 325.0 1 597.0 2 869.0 3 2108.5 4 3348.0 5 2356.0 6 1364.0 7 1350.0 8 1336.0 9 1398.5 10 1461.0 11 1427.0 12 1393.0 13 1450.0 14 1507.0 15 1513.5 16 1520.0 17 1513.5 18 1507.0 19 1564.0 20 1621.0 21 1869.0 22 2117.0 23 2385.5 24 2654.0 25 3456.5 26 5019.5 27 5780.0 28 6858.0 29 7936.0 30 9263.5 31 10591.0 32 12408.0 33 14225.0 34 16566.0 35 18907.0 36 20669.5 37 22432.0 38 24557.0 39 26682.0 40 28578.0 41 30474.0 42 33009.5 43 35545.0 44 37650.0 45 39755.0 46 44193.5 47 48632.0 48 51801.5 49 54971.0 50 52083.0 51 49195.0 52 43635.5 53 38076.0 54 34019.0 55 29962.0 56 27475.0 57 24988.0 58 23090.0 59 21192.0 60 19246.0 61 17300.0 62 15325.5 63 13351.0 64 11316.0 65 9281.0 66 7569.5 67 5858.0 68 4805.5 69 3753.0 70 3191.0 71 2629.0 72 2099.0 73 1569.0 74 1330.0 75 836.5 76 582.0 77 463.5 78 345.0 79 227.5 80 110.0 81 79.0 82 48.0 83 52.5 84 57.0 85 37.5 86 18.0 87 11.5 88 5.0 89 3.5 90 2.0 91 2.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 560627.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.309456375227114 #Duplication Level Percentage of deduplicated Percentage of total 1 71.6888202006941 24.596044492672146 2 8.502012883277597 5.8339888024086335 3 3.6319594072417396 3.7383165851806863 4 2.299422119014837 3.1556769152228736 5 1.704095459599768 2.9233294415180424 6 1.464672737982442 3.015127524467583 7 1.1997216793197447 2.88132590333245 8 1.0697444632488338 2.936188079558129 9 0.9525505382312834 2.94133420229808 >10 7.403721651822975 43.81422268138984 >50 0.052049287229181646 1.2061176690467665 >100 0.026024643614574447 1.5047005447709565 >500 0.0046844358506234005 1.1246859756666845 >1k 5.204928722914889E-4 0.3289411824671376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1842 0.32856070078679767 No Hit CCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 922 0.16445872210935258 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGC 913 0.16285337666576888 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGC 748 0.133422043533401 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCG 736 0.13128158294195605 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTC 734 0.13092483951004857 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 585 0.10434745383294061 No Hit CTGTCTCTTATACACATCTGACGCGTCAAAGGTCGTATGCCGTCTTCTGCT 574 0.10238536495744943 Illumina Single End Adapter 1 (95% over 22bp) GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 569 0.1014935063776807 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.567434319074893E-4 0.0 0.0 0.11273092448276661 0.0 2 3.567434319074893E-4 0.0 0.0 0.6128852160170666 0.0 3 3.567434319074893E-4 0.0 0.0 0.9152252745586638 0.0 4 3.567434319074893E-4 0.0 0.0 1.2609096600770209 0.0 5 3.567434319074893E-4 0.0 0.0 2.1236936501452837 0.0 6 3.567434319074893E-4 0.0 0.0 2.638474422387791 0.0 7 3.567434319074893E-4 0.0 0.0 3.0480158822175887 0.0 8 3.567434319074893E-4 0.0 0.0 3.630399534806565 0.0 9 3.567434319074893E-4 0.0 0.0 3.8408781596319836 0.0 10 3.567434319074893E-4 0.0 0.0 4.466962882629627 0.0 11 3.567434319074893E-4 0.0 0.0 5.256079354008993 0.0 12 3.567434319074893E-4 0.0 0.0 5.978841547053567 0.0 13 3.567434319074893E-4 0.0 0.0 6.2344482160152825 0.0 14 3.567434319074893E-4 0.0 0.0 6.348070999077819 0.0 15 3.567434319074893E-4 0.0 0.0 6.553733587572486 0.0 16 3.567434319074893E-4 0.0 0.0 6.977544784678583 0.0 17 3.567434319074893E-4 0.0 0.0 7.531032219283053 0.0 18 3.567434319074893E-4 0.0 0.0 8.121799342521856 0.0 19 3.567434319074893E-4 0.0 0.0 8.515822463063676 0.0 20 5.35115147861234E-4 0.0 0.0 8.890046323134634 0.0 21 7.134868638149786E-4 0.0 0.0 9.341683507929515 0.0 22 7.134868638149786E-4 0.0 0.0 9.882863294133175 0.0 23 7.134868638149786E-4 0.0 0.0 10.405492421877648 0.0 24 7.134868638149786E-4 0.0 0.0 10.83144407957519 0.0 25 7.134868638149786E-4 0.0 0.0 11.211019091124758 0.0 26 7.134868638149786E-4 0.0 0.0 11.570973213919416 0.0 27 7.134868638149786E-4 0.0 0.0 11.943948471978695 0.0 28 7.134868638149786E-4 0.0 0.0 12.344036230862944 0.0 29 7.134868638149786E-4 1.7837171595374464E-4 0.0 12.734313545369737 0.0 30 7.134868638149786E-4 1.7837171595374464E-4 0.0 13.208603938090745 0.0 31 7.134868638149786E-4 1.7837171595374464E-4 0.0 13.626885612002276 0.0 32 7.134868638149786E-4 1.7837171595374464E-4 0.0 14.040172877867102 0.0 33 7.134868638149786E-4 1.7837171595374464E-4 0.0 14.461843614381754 0.0 34 7.134868638149786E-4 1.7837171595374464E-4 0.0 14.877449712553979 0.0 35 7.134868638149786E-4 1.7837171595374464E-4 0.0 15.31089298232158 0.0 36 7.134868638149786E-4 1.7837171595374464E-4 0.0 15.720434442151378 0.0 37 7.134868638149786E-4 1.7837171595374464E-4 0.0 16.146742843280826 0.0 38 7.134868638149786E-4 1.7837171595374464E-4 0.0 16.575726820149583 0.0 39 7.134868638149786E-4 1.7837171595374464E-4 0.0 17.059649285532092 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 20 7.0301903E-4 45.000004 1 GTCGTTA 20 7.0301903E-4 45.000004 20 TTGTGCG 50 2.1827873E-11 45.0 1 TAACGCC 25 3.88824E-5 45.0 12 ACTACGG 35 1.2104465E-7 45.0 2 ATAACGC 25 3.88824E-5 45.0 11 ACGCGCA 25 3.88824E-5 45.0 17 ATTAGCG 30 2.1635042E-6 44.999996 1 CACGGGC 95 0.0 42.63158 4 TACGAAT 75 0.0 42.000004 12 CGAATAT 70 0.0 41.785713 14 CGGTCTA 55 6.002665E-11 40.909092 31 TACGGTT 105 0.0 40.714287 33 TAACGGG 145 0.0 40.344826 3 CTACGAA 80 0.0 39.375004 11 GCTACGA 80 0.0 39.375004 10 TATACGG 40 3.453988E-7 39.375004 2 CGTTTTT 1040 0.0 39.375 1 TTTGCGG 105 0.0 38.57143 2 ATGTACG 35 6.242566E-6 38.571426 1 >>END_MODULE