SRR2935382.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935382.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	473032
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	14035	2.9670297146916065	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8509	1.7988212213972838	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCG	8256	1.7453364677231138	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGC	7333	1.5502122477971891	No Hit
GAACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT	4051	0.8563902653520269	No Hit
GAATGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTT	2672	0.564866647499535	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	2377	0.5025030019110758	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT	1631	0.3447969693382266	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTC	1447	0.3058989666661029	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGACAAT	1338	0.28285612812663835	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTT	1251	0.26446413773275385	No Hit
ACCATACGGAAAGAGTTCCGAACCCGCATGGTTATGAACAATGGACTCAAC	971	0.2052715249708265	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGGACAATCGTA	951	0.2010434812021174	No Hit
CGCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG	868	0.18349709956197466	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTC	843	0.1782120448510883	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCT	742	0.15686042381910736	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	570	0.12049924740820918	No Hit
CGTCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCT	496	0.10485548546398551	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACTAG	20	7.029071E-4	45.000004	1
CATCGAA	35	1.2099008E-7	45.000004	42
TATCGCG	20	7.029071E-4	45.000004	1
CACGACG	25	3.8873135E-5	45.0	26
ACGTCAT	25	3.8873135E-5	45.0	35
CGTTTTT	3945	0.0	43.28897	1
CCGAACC	110	0.0	42.954544	18
CGATGAA	680	0.0	42.683826	19
CCGATGA	665	0.0	41.954887	18
TATGGGC	65	0.0	41.538464	4
TGATACC	1110	0.0	41.351353	4
TACGAAT	60	3.6379788E-12	41.249996	12
CGAATAT	60	3.6379788E-12	41.249996	14
TACGGCT	835	0.0	41.227547	7
TATGCGG	55	6.002665E-11	40.909092	2
GAACCCG	110	0.0	40.909092	20
ATCGAAT	55	6.002665E-11	40.909092	43
GATACCT	1130	0.0	40.420353	5
ACGGCTG	860	0.0	40.2907	8
ATGAATG	780	0.0	40.096153	21