##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935380.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 514927 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.913661548141775 33.0 31.0 34.0 30.0 34.0 2 31.966735090605077 33.0 31.0 34.0 30.0 34.0 3 32.05443101643534 33.0 31.0 34.0 30.0 34.0 4 35.77621876498999 37.0 35.0 37.0 35.0 37.0 5 35.76911872945097 37.0 35.0 37.0 35.0 37.0 6 35.69776880994782 37.0 35.0 37.0 35.0 37.0 7 35.92281624385593 37.0 35.0 37.0 35.0 37.0 8 35.65536085697585 37.0 35.0 37.0 33.0 37.0 9 37.462566538557894 39.0 37.0 39.0 34.0 39.0 10 36.99062585570382 39.0 37.0 39.0 33.0 39.0 11 36.97036473131143 39.0 37.0 39.0 33.0 39.0 12 36.9701025582267 39.0 37.0 39.0 33.0 39.0 13 36.84261264218035 39.0 37.0 39.0 33.0 39.0 14 37.97768615745533 40.0 37.0 41.0 33.0 41.0 15 37.97768615745533 40.0 37.0 41.0 33.0 41.0 16 38.052180211952376 40.0 37.0 41.0 33.0 41.0 17 37.94017987015635 40.0 37.0 41.0 33.0 41.0 18 37.896103719556365 40.0 37.0 41.0 33.0 41.0 19 37.8285601648389 40.0 37.0 41.0 33.0 41.0 20 37.752013392189575 40.0 36.0 41.0 33.0 41.0 21 37.84843288466132 40.0 36.0 41.0 33.0 41.0 22 37.91800973730257 40.0 37.0 41.0 33.0 41.0 23 37.91080871657536 40.0 37.0 41.0 33.0 41.0 24 37.91493745715412 40.0 36.0 41.0 33.0 41.0 25 37.74236736469441 40.0 36.0 41.0 33.0 41.0 26 37.7004254972064 40.0 36.0 41.0 33.0 41.0 27 37.69568113538424 40.0 36.0 41.0 33.0 41.0 28 37.580317210012296 40.0 36.0 41.0 33.0 41.0 29 37.582261174884984 40.0 36.0 41.0 33.0 41.0 30 37.511686122498915 40.0 36.0 41.0 33.0 41.0 31 37.60062300093023 40.0 36.0 41.0 33.0 41.0 32 37.46957529902297 40.0 36.0 41.0 33.0 41.0 33 37.33671763181965 40.0 36.0 41.0 32.0 41.0 34 37.26886529546907 40.0 36.0 41.0 32.0 41.0 35 37.25281059256943 40.0 36.0 41.0 32.0 41.0 36 37.21192324348888 40.0 36.0 41.0 32.0 41.0 37 37.20756922825954 40.0 36.0 41.0 32.0 41.0 38 37.15103888512352 40.0 36.0 41.0 32.0 41.0 39 36.94289287607758 40.0 35.0 41.0 31.0 41.0 40 36.89127390872881 39.0 35.0 41.0 31.0 41.0 41 36.68660023653838 39.0 35.0 41.0 31.0 41.0 42 36.79797136293106 39.0 35.0 41.0 31.0 41.0 43 36.7456357891507 39.0 35.0 41.0 31.0 41.0 44 36.67675029664399 39.0 35.0 41.0 31.0 41.0 45 36.65307703810443 39.0 35.0 41.0 31.0 41.0 46 36.501690530890784 39.0 35.0 41.0 31.0 41.0 47 36.43756882043474 39.0 35.0 41.0 31.0 41.0 48 36.324616887442296 39.0 35.0 41.0 30.0 41.0 49 36.27934445076681 39.0 35.0 40.0 30.0 41.0 50 36.157123242712075 39.0 35.0 40.0 30.0 41.0 51 34.876899055594286 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 3.0 10 3.0 11 11.0 12 4.0 13 12.0 14 15.0 15 20.0 16 27.0 17 44.0 18 99.0 19 248.0 20 502.0 21 1029.0 22 1773.0 23 2408.0 24 2783.0 25 3275.0 26 3936.0 27 4488.0 28 5008.0 29 5781.0 30 7092.0 31 9373.0 32 12666.0 33 18067.0 34 31598.0 35 38542.0 36 38708.0 37 58454.0 38 107815.0 39 161067.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.71031039351209 19.55131504077277 23.000930228945073 10.737444336770066 2 28.796120615155157 32.49353791896715 22.716229679158406 15.994111786719284 3 28.912059379290657 31.13082048523383 24.385398318596614 15.571721816878897 4 26.545121929904624 22.700110889504728 33.05439411800119 17.700373062589456 5 30.72765654160687 27.068885492506706 22.81682646278016 19.386631503106265 6 24.46405024401517 38.75636740741892 23.137066030718916 13.642516317846995 7 73.9205751494872 5.662550225565955 15.899923678502 4.516950946444836 8 73.25038306400712 12.263291689890023 9.472993259238688 5.0133319868641575 9 67.06387507355412 7.82635208485863 10.922130709789931 14.187642131797324 10 39.87652618720712 27.540602842733048 17.681341238661012 14.901529731398819 11 32.61355493108732 23.929217151169 25.099674322768085 18.3575535949756 12 27.892691585409196 20.406581903842678 28.567932930298856 23.132793580449267 13 25.45428769514902 22.523386810169207 33.13440545941464 18.887920035267136 14 20.371042885690592 30.44489801467004 27.038784138334172 22.145274961305194 15 17.778053976583088 25.20396094980454 36.543238167740284 20.47474690587209 16 20.140136368844516 24.98490077234249 30.116696153046934 24.75826670576606 17 19.824363453460396 26.00892942106357 30.08892522629421 24.077781899181826 18 20.6320507567092 26.426658536064334 29.02566771600635 23.915622991220115 19 22.159645930394017 27.247551594692066 26.64746653409124 23.94533594082268 20 25.65548126239253 25.621884267090287 30.264095687349858 18.45853878316732 21 23.517314104717755 29.54981968317839 27.226189343343815 19.706676868760038 22 20.97229316000132 24.281305893845147 29.18704981482812 25.559351131325407 23 22.029530399454682 29.017899624606986 27.855598948977235 21.096971026961103 24 22.81585545135524 25.55371926506087 26.539490063640088 25.0909352199438 25 21.236214065294693 31.370660307189173 25.330969244184125 22.062156383332006 26 19.97020936948344 26.664362132884854 29.082763187791667 24.282665309840034 27 24.145170092071304 26.99314660136291 25.856480627351065 23.005202679214722 28 19.179417665028247 27.515550747970103 30.50723694814993 22.79779463885172 29 22.746525235615923 24.045350117589486 29.78130880687942 23.42681583991517 30 20.377645763380052 26.7919530341194 28.322072837509005 24.50832836499154 31 22.877805980265165 24.368502719803 24.758849312621013 27.99484198731082 32 26.77389222161588 26.881480287497062 25.19366822870038 21.150959262186678 33 22.166637212653445 24.22595824262468 25.51468460577907 28.0927199389428 34 22.214605177044515 23.382926123508767 31.727798309274906 22.674670390171812 35 21.418764213179735 22.331514952604934 29.7071235340155 26.542597300199834 36 19.802418595257194 25.27775781809849 30.776401315137875 24.143422271506445 37 22.289178854478404 24.488325529638182 29.88307080421108 23.339424811672334 38 20.485816436116185 24.517844276955763 25.87726027184436 29.119079015083692 39 24.829733146640205 22.855278515207008 29.24356267975849 23.071425658394297 40 20.962194641182148 22.60903001784719 32.34555577780928 24.08321956316138 41 18.590207932386534 24.966645757553984 32.551992806747364 23.891153503312122 42 20.391434125613923 24.42132574131867 32.84601506621327 22.341225066854136 43 22.72069633171304 23.29262206099117 29.4533011475413 24.53338045975449 44 22.63466471946509 23.800655238509535 28.900989849046567 24.66369019297881 45 20.92937445501984 22.148964804719892 28.021059295783672 28.9006014444766 46 24.15216137433073 25.90172975975235 27.20832273312528 22.737786132791637 47 20.019730952154383 23.63597170084303 34.06113876335869 22.283158583643896 48 21.987388503613133 23.928051937459095 28.185742833450178 25.89881672547759 49 19.727844917823305 22.800319268556514 32.9359307241609 24.535905089459284 50 20.410271747257376 22.38278435584073 31.18791595701915 26.01902793988274 51 20.10382054155249 22.35229459709823 28.698048461238194 28.845836400111086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 219.0 1 460.0 2 701.0 3 1640.0 4 2579.0 5 1794.5 6 1010.0 7 968.5 8 927.0 9 922.0 10 917.0 11 933.5 12 950.0 13 932.0 14 914.0 15 910.0 16 906.0 17 966.5 18 1027.0 19 1130.0 20 1233.0 21 1253.0 22 1273.0 23 1658.0 24 2043.0 25 2524.5 26 3773.5 27 4541.0 28 5459.5 29 6378.0 30 7514.5 31 8651.0 32 9699.5 33 10748.0 34 12142.5 35 13537.0 36 14466.5 37 15396.0 38 16987.0 39 18578.0 40 19887.5 41 21197.0 42 24043.5 43 26890.0 44 29244.5 45 31599.0 46 53636.5 47 75674.0 48 60976.5 49 46279.0 50 45371.5 51 44464.0 52 38842.0 53 33220.0 54 30088.5 55 26957.0 56 25351.0 57 23745.0 58 22763.5 59 21782.0 60 21671.0 61 21560.0 62 19552.0 63 17544.0 64 14159.5 65 10775.0 66 8798.5 67 6822.0 68 5564.5 69 4307.0 70 3417.0 71 2527.0 72 2185.0 73 1843.0 74 1517.5 75 880.5 76 569.0 77 425.0 78 281.0 79 172.5 80 64.0 81 59.5 82 55.0 83 35.0 84 15.0 85 12.5 86 10.0 87 9.0 88 8.0 89 6.0 90 4.0 91 6.5 92 9.0 93 4.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 514927.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.67691940694199 #Duplication Level Percentage of deduplicated Percentage of total 1 73.45898926472051 21.065775148598075 2 8.829240205143954 5.063908195748904 3 3.1901597303612923 2.7445186044852776 4 1.750810695965961 2.008314289001116 5 1.230830410115918 1.7648212237253773 6 0.9206729088782433 1.584123768483374 7 0.8139479139542622 1.6339063110940455 8 0.7273926369489875 1.6687504021591304 9 0.6469288464017486 1.6696733751260011 >10 8.265449748734312 47.83560876359337 >50 0.11468287275794675 2.21260973660295 >100 0.042073006573921296 2.2287615930794704 >500 0.001357193760449074 0.3041608635277406 >1k 0.005428775041796296 2.652212673716939 >5k 0.0020357906406736105 5.562855051058216 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCG 9966 1.9354199721513925 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGC 9414 1.8282203108401773 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTC 9206 1.7878262355634877 No Hit GCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 2767 0.5373577225509635 TruSeq Adapter, Index 20 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTT 1936 0.3759756237291888 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCT 1795 0.3485931015464328 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCT 1588 0.3083932285547272 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGCTTTT 1518 0.2947990686058412 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTC 1421 0.27596144696238495 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1308 0.2540165887591833 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTA 1296 0.2516861613393743 No Hit CCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 955 0.1854631821598013 TruSeq Adapter, Index 20 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGCT 608 0.11807498927032375 TruSeq Adapter, Index 23 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.710114249204256E-4 0.0 0.0 0.12700829437959166 0.0 2 9.710114249204256E-4 0.0 0.0 1.0498575526239642 0.0 3 9.710114249204256E-4 0.0 0.0 1.350288487494344 0.0 4 9.710114249204256E-4 0.0 0.0 1.9983415124862358 0.0 5 9.710114249204256E-4 0.0 0.0 4.719503929683237 0.0 6 9.710114249204256E-4 0.0 0.0 5.664298046130811 0.0 7 9.710114249204256E-4 0.0 0.0 6.535489496569417 0.0 8 9.710114249204256E-4 0.0 0.0 7.508442944339683 0.0 9 9.710114249204256E-4 0.0 0.0 7.815088352329553 0.0 10 9.710114249204256E-4 0.0 0.0 10.460123473812793 0.0 11 9.710114249204256E-4 0.0 0.0 11.375787247512754 0.0 12 0.0011652137099045108 0.0 0.0 14.051312127738495 0.0 13 0.0011652137099045108 0.0 0.0 14.526330916809567 0.0 14 0.0011652137099045108 0.0 0.0 14.753935994810915 0.0 15 0.0011652137099045108 0.0 0.0 15.2751749277082 0.0 16 0.0011652137099045108 0.0 0.0 15.830787665047668 0.0 17 0.0011652137099045108 0.0 0.0 16.424075645674048 0.0 18 0.0011652137099045108 0.0 0.0 17.03736646165379 0.0 19 0.0011652137099045108 0.0 0.0 17.740767137866143 0.0 20 0.0011652137099045108 0.0 0.0 18.174032435665637 0.0 21 0.0011652137099045108 0.0 0.0 18.618755668279192 0.0 22 0.0011652137099045108 0.0 0.0 19.176893035323452 0.0 23 0.0011652137099045108 0.0 0.0 19.667253804908267 0.0 24 0.0011652137099045108 0.0 0.0 20.070611950820215 0.0 25 0.0011652137099045108 0.0 0.0 20.418039838656743 0.0 26 0.0011652137099045108 0.0 0.0 20.787606786981456 0.0 27 0.0011652137099045108 0.0 0.0 21.215628623086378 0.0 28 0.0011652137099045108 0.0 0.0 21.56363911777786 0.0 29 0.0011652137099045108 0.0 0.0 21.927185795268066 0.0 30 0.0011652137099045108 0.0 0.0 22.330155536610043 0.0 31 0.0011652137099045108 0.0 0.0 22.712345633458725 0.0 32 0.0011652137099045108 0.0 0.0 23.09201110060261 0.0 33 0.0011652137099045108 0.0 0.0 23.4508969232532 0.0 34 0.0011652137099045108 0.0 0.0 23.82415371499261 0.0 35 0.0011652137099045108 0.0 0.0 24.218384353510302 0.0 36 0.0011652137099045108 0.0 0.0 24.606012114338537 0.0 37 0.0011652137099045108 0.0 0.0 24.962373307284334 0.0 38 0.0011652137099045108 0.0 0.0 25.304557733426293 0.0 39 0.0013594159948885959 0.0 0.0 25.69043767368967 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 20 7.0296536E-4 45.000004 21 ACAACGA 30 2.1631586E-6 45.000004 13 CTCACGT 20 7.0296536E-4 45.000004 45 CGTGACA 20 7.0296536E-4 45.000004 26 CGATTAT 20 7.0296536E-4 45.000004 10 TAGCACG 30 2.1631586E-6 45.000004 1 CTCGAAT 30 2.1631586E-6 45.000004 43 CGGTCTA 20 7.0296536E-4 45.000004 31 CACAACG 30 2.1631586E-6 45.000004 12 TCGCGCA 20 7.0296536E-4 45.000004 34 TAGTACG 20 7.0296536E-4 45.000004 1 GTGCACG 35 1.2101737E-7 45.0 1 TCTACGG 35 1.2101737E-7 45.0 2 TATAGCG 35 1.2101737E-7 45.0 1 CGAGATA 90 0.0 42.500004 19 TACGGCT 1125 0.0 41.0 7 CGGGTAT 55 6.002665E-11 40.909092 6 CATACGA 55 6.002665E-11 40.909092 18 ACGGCTA 50 1.0786607E-9 40.500004 30 AGGTTCG 50 1.0786607E-9 40.500004 1 >>END_MODULE