##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935379.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 657360 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.727079530242182 31.0 31.0 34.0 30.0 34.0 2 31.790550079104296 33.0 31.0 34.0 30.0 34.0 3 31.859758731897287 33.0 31.0 34.0 30.0 34.0 4 35.62008944870391 37.0 35.0 37.0 33.0 37.0 5 35.61263234757211 37.0 35.0 37.0 33.0 37.0 6 35.52706736035049 37.0 35.0 37.0 33.0 37.0 7 35.82054734087867 37.0 35.0 37.0 35.0 37.0 8 35.522667944505294 37.0 35.0 37.0 33.0 37.0 9 37.38584489473044 39.0 37.0 39.0 34.0 39.0 10 36.865636789582574 39.0 37.0 39.0 32.0 39.0 11 36.75319155409517 39.0 35.0 39.0 32.0 39.0 12 36.942119995132046 39.0 37.0 39.0 33.0 39.0 13 36.87437477181453 39.0 37.0 39.0 32.0 39.0 14 38.057493610806866 40.0 37.0 41.0 33.0 41.0 15 37.98988377753438 40.0 37.0 41.0 33.0 41.0 16 38.07067816721431 40.0 37.0 41.0 33.0 41.0 17 37.923618717293415 40.0 37.0 41.0 33.0 41.0 18 37.73490933430693 39.0 37.0 41.0 33.0 41.0 19 37.50304247292199 39.0 37.0 41.0 33.0 41.0 20 37.251615553121574 39.0 35.0 41.0 32.0 41.0 21 37.39957405379092 39.0 35.0 41.0 33.0 41.0 22 37.53343525617622 39.0 35.0 41.0 33.0 41.0 23 37.479738651576 39.0 35.0 41.0 33.0 41.0 24 37.4251521236461 39.0 35.0 41.0 33.0 41.0 25 37.31396799318486 39.0 35.0 41.0 33.0 41.0 26 37.28612632347572 39.0 35.0 41.0 33.0 41.0 27 37.304621516368506 39.0 35.0 41.0 33.0 41.0 28 37.17437325057807 39.0 35.0 41.0 32.0 41.0 29 37.18329073871242 39.0 35.0 41.0 33.0 41.0 30 37.058165997322625 39.0 35.0 41.0 32.0 41.0 31 36.99545910916393 39.0 35.0 41.0 32.0 41.0 32 36.626417792381645 39.0 35.0 41.0 31.0 41.0 33 36.20752707800901 39.0 35.0 41.0 29.0 41.0 34 35.84519289278325 39.0 35.0 41.0 25.0 41.0 35 35.63366952659121 39.0 35.0 41.0 24.0 41.0 36 35.45352014117074 39.0 35.0 41.0 23.0 41.0 37 35.26971218206158 39.0 35.0 41.0 22.0 41.0 38 35.27584124376293 39.0 35.0 41.0 22.0 41.0 39 35.15407995618839 39.0 35.0 41.0 21.0 41.0 40 34.98042472921991 39.0 35.0 41.0 21.0 41.0 41 34.87956827309237 39.0 35.0 41.0 20.0 41.0 42 34.83648837775344 39.0 35.0 41.0 19.0 41.0 43 34.82552939028842 39.0 35.0 41.0 18.0 41.0 44 34.71821832785688 39.0 35.0 40.0 18.0 41.0 45 34.83863636363636 39.0 35.0 40.0 20.0 41.0 46 34.68109863697213 39.0 35.0 40.0 20.0 41.0 47 34.47834672021419 38.0 34.0 40.0 18.0 41.0 48 34.43540677862967 38.0 34.0 40.0 18.0 41.0 49 34.42835280516003 38.0 34.0 40.0 18.0 41.0 50 34.30043050991846 38.0 34.0 40.0 18.0 41.0 51 33.04463307776561 37.0 32.0 40.0 13.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 4.0 12 2.0 13 11.0 14 16.0 15 21.0 16 44.0 17 93.0 18 227.0 19 577.0 20 1199.0 21 2302.0 22 3294.0 23 4211.0 24 5761.0 25 8851.0 26 13281.0 27 15190.0 28 13948.0 29 12704.0 30 12988.0 31 14796.0 32 18835.0 33 24572.0 34 35187.0 35 42838.0 36 49648.0 37 70699.0 38 128901.0 39 177094.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87489351344773 17.32079834489473 20.459869782158936 18.3444383594986 2 34.11585736886942 32.19149324571011 20.396738469027625 13.295910916392845 3 23.590726542533773 31.663624193744678 32.115127175368144 12.630522088353413 4 21.33397225264695 20.152123646099547 43.72094438359498 14.792959717658514 5 28.336375806255326 23.732049409760254 30.80853717901911 17.123037604965315 6 20.512048192771086 35.31154922721188 31.404101253498844 12.772301326518193 7 66.71778021175612 3.6966046002190582 25.549470609711573 4.036144578313253 8 66.34264330047462 10.78024218084459 18.06103200681514 4.816082511865645 9 61.33092977972496 5.651849823536571 18.24647073141049 14.770749665327978 10 33.00337714494341 29.389984179140804 24.728611415358404 12.878027260557381 11 22.61835219666545 21.14199221126932 38.19672629913594 18.042929292929294 12 18.83047340878666 19.518072289156628 39.84711573566995 21.804338566386757 13 19.639162711451867 20.98271875380309 44.45113788487283 14.926980649872215 14 17.17293416088597 28.66846172569064 35.61959961056347 18.539004502859925 15 14.269350127783861 24.489929414628207 43.857095046854084 17.383625410733845 16 17.129578921747594 26.9934282584885 33.53398442253864 22.343008397225265 17 17.354417670682732 26.593343069246682 37.00924911768285 19.042990142387733 18 17.22602531337471 25.64819885603018 35.819794328830476 21.305981501764634 19 16.30704636728733 27.056559571619815 33.90638310819033 22.730010952902518 20 18.9856395278082 26.468601679445054 38.394182791773154 16.15157600097359 21 17.974017281246198 29.930023122794207 36.098180601192645 15.997778994766945 22 17.10797736400146 21.78121577217963 38.143787270293295 22.967019593525617 23 17.54350736278447 27.768954606304003 36.642631130582934 18.044906900328588 24 18.99644030668127 25.18513447730315 34.45524522331751 21.363179992698065 25 16.492332968236585 33.05662042107825 32.41374589266155 18.037300718023612 26 17.380278690519653 24.436838262139467 36.254867956675184 21.928015090665692 27 20.80047462577583 26.572045758792743 32.21172569064135 20.41575392479007 28 15.314439576487771 25.616709261287575 37.92290373615675 21.145947426067906 29 18.03638797614701 23.039582572715105 38.43829864914202 20.485730801995864 30 16.33473287087745 30.73369234513813 35.28492758914445 17.646647194839964 31 19.322593403918706 23.55680296945357 32.45360228793964 24.667001338688085 32 20.474625775830596 27.25660216624072 34.68419131069733 17.58458074723135 33 19.538152610441767 27.278355847632955 30.853109407326272 22.330382134599002 34 23.730832420591458 23.956279664110987 33.6152184495558 18.697669465741754 35 23.285718632104174 26.654801022270902 30.26347815504442 19.796002190580502 36 23.373189728611415 25.988955823293175 31.21972739442619 19.418127053669224 37 20.056285749056833 27.047280029207737 35.0345320676646 17.86190215407083 38 19.80132651819399 27.62504563709383 28.81404405500791 23.759583789704273 39 24.64129244249726 24.37522818546915 32.47702932943896 18.506450042594622 40 22.63219544846051 27.27531337471096 31.76600340756967 18.326487769258854 41 23.77038456857734 27.02370086406231 29.069763904101254 20.136150663259098 42 22.621242545941342 24.74321528538396 33.910186199342824 18.725355969331872 43 24.78444079347694 24.47988925398564 29.362297675550685 21.373372276986736 44 21.119630035292687 24.680996714129243 31.27677376171352 22.92259948886455 45 19.5281124497992 22.967628088110015 30.976177437020812 26.528082025069978 46 25.211908239016672 25.969940367530732 29.022453450164292 19.795697943288303 47 18.427649993915054 24.16910064500426 37.218267007423634 20.184982353657052 48 20.976633807959107 25.50003042472922 30.292229524157232 23.231106243154436 49 19.403066812705365 22.11117196056955 36.8236582694414 21.66210295728368 50 20.65489229645856 22.58108190337106 34.03599245466715 22.728033345503228 51 19.89427406596081 22.305433856638675 31.163593769015456 26.636698308385053 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 264.0 1 404.0 2 544.0 3 9226.0 4 17908.0 5 12186.0 6 6464.0 7 6309.0 8 6154.0 9 6192.5 10 6231.0 11 6222.0 12 6213.0 13 5984.5 14 5756.0 15 5376.5 16 4997.0 17 4792.0 18 4587.0 19 4417.0 20 4247.0 21 4204.5 22 4162.0 23 4245.5 24 4329.0 25 4791.0 26 6114.5 27 6976.0 28 8071.5 29 9167.0 30 10563.5 31 11960.0 32 13434.0 33 14908.0 34 17033.0 35 19158.0 36 21435.5 37 23713.0 38 25962.5 39 28212.0 40 29926.5 41 31641.0 42 33936.0 43 36231.0 44 40371.0 45 44511.0 46 81603.0 47 118695.0 48 90532.0 49 62369.0 50 58182.5 51 53996.0 52 45120.5 53 36245.0 54 30974.0 55 25703.0 56 22156.0 57 18609.0 58 16234.0 59 13859.0 60 11759.0 61 9659.0 62 7896.0 63 6133.0 64 5056.0 65 3979.0 66 3065.0 67 2151.0 68 1634.5 69 1118.0 70 812.0 71 506.0 72 433.5 73 361.0 74 296.5 75 168.5 76 105.0 77 66.0 78 27.0 79 21.0 80 15.0 81 9.5 82 4.0 83 4.5 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 657360.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.538522062660334 #Duplication Level Percentage of deduplicated Percentage of total 1 75.57677864084344 29.126173510749414 2 8.645576144381915 6.663754539693446 3 3.5675252874159464 4.124614559945343 4 2.2720111827370495 3.5023981237009107 5 1.6663299091751467 3.210894598420859 6 1.2883328615792191 2.979026664601264 7 1.05181175922713 2.8374689482118227 8 0.858554528806155 2.646993812031436 9 0.775601037741196 2.69014659343302 >10 4.227941552466225 25.774409092606554 >50 0.043855781976845636 1.1261489546972137 >100 0.01619898245599963 1.1249308337581279 >500 0.003160777064585294 0.7881215478522022 >1k 0.004346068463804779 3.642473660687864 >5k 3.9509713307316177E-4 0.7937553378967408 >10k+ 0.001580388532292647 8.96868922171376 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC 19344 2.9426798101496896 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGC 14448 2.1978824388462943 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCG 14366 2.185408299866131 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10744 1.6344164536935621 No Hit GAACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCT 5213 0.7930205671169527 No Hit GCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 3935 0.5986065474017281 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCT 2896 0.440550079104296 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTT 2767 0.42092612875745405 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTC 2428 0.3693562127297067 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTT 2228 0.3389314835097968 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACTAGGGT 2206 0.33558476329560666 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACTAGGGTCGTA 1893 0.2879700620664476 No Hit CGTTCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTC 1617 0.24598393574297187 No Hit CGCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTG 1486 0.2260557381039309 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCT 1308 0.19897772909821101 No Hit CGTCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCT 1158 0.17615918218327858 No Hit CCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 881 0.1340209322137033 No Hit CTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGCT 876 0.13326031398320556 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14801630765486187 0.0 2 0.0 0.0 0.0 1.0446330777656079 0.0 3 0.0 0.0 0.0 1.4856395278082024 0.0 4 0.0 0.0 0.0 2.7862967019593525 0.0 5 0.0 0.0 0.0 6.920865279299014 0.0 6 0.0 0.0 0.0 8.545393695996106 0.0 7 0.0 0.0 0.0 9.895947426067908 0.0 8 0.0 0.0 0.0 11.315108920530607 0.0 9 0.0 0.0 0.0 11.891049044663502 0.0 10 0.0 0.0 0.0 14.971248630887185 0.0 11 0.0 0.0 0.0 15.819794328830474 0.0 12 0.0 0.0 0.0 18.8513143483023 0.0 13 0.0 0.0 0.0 19.340543994158452 0.0 14 0.0 0.0 0.0 19.64296580260436 0.0 15 0.0 0.0 0.0 20.167031763417306 0.0 16 0.0 0.0 0.0 20.63952780820251 0.0 17 0.0 0.0 0.0 21.193866374589266 0.0 18 1.5212364609954972E-4 0.0 0.0 21.784410368747718 0.0 19 1.5212364609954972E-4 0.0 0.0 22.522818546914934 0.0 20 3.0424729219909945E-4 0.0 0.0 22.945570159425582 0.0 21 3.0424729219909945E-4 0.0 0.0 23.339570402823416 0.0 22 3.0424729219909945E-4 0.0 0.0 23.852987708409394 0.0 23 3.0424729219909945E-4 0.0 0.0 24.32806985517829 0.0 24 3.0424729219909945E-4 0.0 0.0 24.705336497505172 0.0 25 3.0424729219909945E-4 0.0 0.0 25.039400024339784 0.0 26 3.0424729219909945E-4 0.0 0.0 25.39247900693684 0.0 27 3.0424729219909945E-4 0.0 0.0 25.792564196178652 0.0 28 3.0424729219909945E-4 0.0 0.0 26.142448582207617 0.0 29 3.0424729219909945E-4 0.0 0.0 26.525495923086286 0.0 30 3.0424729219909945E-4 0.0 0.0 26.98277960326153 0.0 31 7.606182304977486E-4 0.0 0.0 27.38499452354874 0.0 32 9.127418765972983E-4 0.0 0.0 27.74765729585007 0.0 33 0.001064865522696848 0.0 0.0 28.108342460752098 0.0 34 0.001064865522696848 0.0 0.0 28.459748083242058 0.0 35 0.001064865522696848 0.0 0.0 28.839448703906534 0.0 36 0.001064865522696848 0.0 0.0 29.193896799318487 0.0 37 0.0012169891687963978 0.0 0.0 29.55655957161981 0.0 38 0.0013691128148959474 0.0 0.0 29.926980649872217 0.0 39 0.0013691128148959474 0.0 0.0 30.32158938785445 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.03108E-4 45.000004 1 CGGCGCC 20 7.03108E-4 45.000004 31 GGCCGAA 20 7.03108E-4 45.000004 42 TTCGTAG 20 7.03108E-4 45.000004 1 CACGATA 20 7.03108E-4 45.000004 17 TCGATCA 20 7.03108E-4 45.000004 17 ACTAGCG 20 7.03108E-4 45.000004 1 GTGCGGC 20 7.03108E-4 45.000004 22 GAGTGCG 25 3.888977E-5 45.0 1 ACGTTAG 45 3.8380676E-10 45.0 1 GCGCGAG 25 3.888977E-5 45.0 1 CCCCGTA 25 3.888977E-5 45.0 40 CGATCGC 25 3.888977E-5 45.0 34 TACACGG 35 1.2108649E-7 45.0 2 CATACGG 30 2.164079E-6 44.999996 2 CGTTTTT 6490 0.0 44.341293 1 CGGCGAA 235 0.0 44.042553 31 CCGATGA 845 0.0 42.869823 18 TACGGCT 1750 0.0 42.685715 7 ACGGTCG 95 0.0 42.63158 40 >>END_MODULE