##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935378.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 677537 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.732088432070867 31.0 31.0 34.0 30.0 34.0 2 31.79157300634504 33.0 31.0 34.0 30.0 34.0 3 31.892580036219424 33.0 31.0 34.0 30.0 34.0 4 35.64612117124231 37.0 35.0 37.0 33.0 37.0 5 35.656973715088625 37.0 35.0 37.0 33.0 37.0 6 35.595942361819354 37.0 35.0 37.0 33.0 37.0 7 35.879789590826775 37.0 35.0 37.0 35.0 37.0 8 35.66578061419524 37.0 35.0 37.0 33.0 37.0 9 37.47686399414349 39.0 37.0 39.0 35.0 39.0 10 36.83174645812701 39.0 37.0 39.0 32.0 39.0 11 36.82890085707496 39.0 37.0 39.0 33.0 39.0 12 36.85785278147171 39.0 35.0 39.0 33.0 39.0 13 36.76344465320713 39.0 35.0 39.0 33.0 39.0 14 37.72661566822181 40.0 37.0 41.0 33.0 41.0 15 37.79114498543991 40.0 37.0 41.0 33.0 41.0 16 37.80877059112639 40.0 36.0 41.0 33.0 41.0 17 37.75345995864433 39.0 36.0 41.0 33.0 41.0 18 37.72496409790166 39.0 36.0 41.0 33.0 41.0 19 37.640508193648465 39.0 36.0 41.0 33.0 41.0 20 37.65871974519473 39.0 36.0 41.0 33.0 41.0 21 37.62088122124696 39.0 36.0 41.0 33.0 41.0 22 37.753173627418136 39.0 36.0 41.0 33.0 41.0 23 37.74169676342399 39.0 36.0 41.0 33.0 41.0 24 37.71229320317562 39.0 36.0 41.0 33.0 41.0 25 37.516274387967 39.0 36.0 41.0 33.0 41.0 26 37.567641324385235 39.0 36.0 41.0 33.0 41.0 27 37.555343841000564 39.0 36.0 41.0 33.0 41.0 28 37.42969461446386 39.0 36.0 41.0 33.0 41.0 29 37.41880517226365 39.0 36.0 41.0 33.0 41.0 30 37.28400220209376 39.0 36.0 41.0 32.0 41.0 31 37.31911024785362 39.0 36.0 41.0 32.0 41.0 32 37.24906831656426 39.0 35.0 41.0 32.0 41.0 33 37.15165371042467 39.0 35.0 41.0 32.0 41.0 34 37.10816383459501 39.0 35.0 41.0 32.0 41.0 35 37.099557662533556 40.0 35.0 41.0 32.0 41.0 36 37.03443206791658 39.0 35.0 41.0 31.0 41.0 37 37.0258170402502 39.0 35.0 41.0 31.0 41.0 38 36.85381905342439 39.0 35.0 41.0 31.0 41.0 39 36.817189319550074 39.0 35.0 41.0 31.0 41.0 40 36.68345492570885 39.0 35.0 41.0 31.0 41.0 41 36.55771123938619 39.0 35.0 41.0 30.0 41.0 42 36.686868761410814 39.0 35.0 41.0 31.0 41.0 43 36.647130710204756 39.0 35.0 41.0 31.0 41.0 44 36.55647735843208 39.0 35.0 41.0 31.0 41.0 45 36.47447445674553 39.0 35.0 41.0 31.0 41.0 46 36.349031860990614 39.0 35.0 40.0 31.0 41.0 47 36.261253628953106 38.0 35.0 40.0 30.0 41.0 48 36.19946216959369 38.0 35.0 40.0 30.0 41.0 49 36.14395228600062 38.0 35.0 40.0 30.0 41.0 50 36.01170563378827 38.0 35.0 40.0 30.0 41.0 51 34.88571546646161 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 8.0 10 4.0 11 7.0 12 14.0 13 18.0 14 17.0 15 30.0 16 48.0 17 94.0 18 194.0 19 375.0 20 708.0 21 1245.0 22 1927.0 23 2495.0 24 3207.0 25 4227.0 26 5262.0 27 6248.0 28 7235.0 29 8793.0 30 10765.0 31 13988.0 32 18831.0 33 26341.0 34 44054.0 35 51748.0 36 55909.0 37 82518.0 38 145151.0 39 186007.0 40 66.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.44646713020838 19.847772151188792 23.57686738879205 10.12889332981077 2 31.36906176341661 28.11846437906712 23.380715739509426 17.13175811800684 3 31.08435406479646 27.938105225249693 24.85664989513488 16.12089081481897 4 27.386696224708025 23.71014424304503 29.73107003750349 19.17208949474346 5 28.090274036694673 28.02326662602928 24.114845388517526 19.771613948758517 6 24.53194438089728 37.06572482388415 24.06112138525276 14.341209409965803 7 77.48993781889403 5.621833198777336 12.38899130232002 4.499237680008619 8 78.20074770824323 8.443228930670944 8.431569050841505 4.924454310244311 9 72.42910719266992 7.268680529624212 9.966245385860846 10.33596689184502 10 39.094839101038026 29.586576083667754 16.918485632518962 14.400099182775259 11 29.97784622832406 24.322804511045153 25.661624383612995 20.037724877017787 12 25.681697088129507 22.104180288308978 30.243219189505517 21.970903434055998 13 25.380016146719665 23.459530623419827 32.436900125011626 18.723553104848886 14 21.012136606561707 29.222315534059394 28.570543010935197 21.195004848443702 15 18.739050413482953 25.591222324389662 34.79824718059678 20.871480081530603 16 22.482167025564657 25.826338635380797 28.88166993094104 22.809824408113506 17 22.40763235070557 25.753279894677338 28.30959785222062 23.529489902396474 18 23.392080432507743 24.53135400723503 29.446657525714464 22.629908034542762 19 23.63590475501707 26.727839217636824 26.461285509130867 23.17497051821524 20 25.750770806612778 25.931129960430205 28.65260494998797 19.66549428296905 21 24.130195103736032 28.079352123943046 28.342953964137752 19.44749880818317 22 23.354444111539298 22.99918676028025 29.105126362102734 24.54124276607772 23 22.010901249673452 27.719371783386 28.532316316304495 21.737410650636054 24 22.385640931786753 25.43329736973774 28.186504943641456 23.994556754834054 25 22.41515961489926 29.170362651781378 25.93039199335239 22.484085739966968 26 21.011989013146145 25.748409311963776 27.170176684077767 26.069424990812312 27 22.462389507879273 26.42674864988923 26.933584438931014 24.177277403300483 28 19.736043935607945 26.64592487199961 29.66037279144903 23.95765840094342 29 21.968541939407 25.89246048555282 26.94922934098064 25.18976823405954 30 21.550262199702747 26.40062461533466 28.52906926116212 23.520043923800472 31 25.378392619148478 25.879767451814438 24.635407365206625 24.106432563830463 32 24.366492162051667 28.689946084125296 24.726620096024277 22.21694165779876 33 22.436117879909144 26.607402990537786 25.332491066908524 25.62398806264455 34 21.272934171860726 27.55790458676057 27.338728364650194 23.8304328767285 35 19.561588518413018 27.261832195142112 26.218789527361608 26.957789759083266 36 22.92760395373242 27.3564395745177 25.890394177734944 23.82556229401494 37 20.881959214035543 28.208201175729148 26.79366588097772 24.11617372925759 38 21.89607357236579 29.479275670553783 24.96867329754685 23.655977459533574 39 21.75630260782806 28.05677033136198 26.432652386511734 23.75427467429823 40 21.834231931245082 25.911647629575953 28.07256282682717 24.1815576123518 41 19.469195040270865 26.963988682536893 27.700037045947308 25.866779231244934 42 21.187772771081136 24.717912084506086 28.274027839070044 25.82028730534273 43 21.995551534454947 24.3927637900218 28.095439806239362 25.516244869283895 44 22.022708722918452 25.005424058021923 28.36391222914763 24.60795498991199 45 21.8396928876209 24.205172558841806 26.518699347784697 27.436435205752602 46 23.39370396007893 26.507187061370818 26.111931894494322 23.987177084055926 47 19.873010625249986 26.072229265707996 30.387417956510127 23.66734215253189 48 21.02512482713121 26.64592487199961 27.305962626395313 25.022987674473868 49 21.58937445482682 23.97477923714867 30.610874387671817 23.824971920352688 50 20.865281158076975 24.61902449607918 29.53329486064968 24.98239948519417 51 20.152552554325446 24.303026993359772 27.272311327647053 28.272109124667733 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 298.0 1 542.0 2 786.0 3 2000.5 4 3215.0 5 2184.5 6 1154.0 7 1130.0 8 1106.0 9 1126.5 10 1147.0 11 1152.5 12 1158.0 13 1167.5 14 1177.0 15 1203.0 16 1229.0 17 1244.5 18 1260.0 19 1233.5 20 1207.0 21 1567.0 22 1927.0 23 2134.0 24 2341.0 25 2896.5 26 4384.5 27 5317.0 28 6079.5 29 6842.0 30 8216.5 31 9591.0 32 11534.0 33 13477.0 34 15729.5 35 17982.0 36 19116.5 37 20251.0 38 22454.5 39 24658.0 40 27094.5 41 29531.0 42 32083.5 43 34636.0 44 38361.5 45 42087.0 46 61491.0 47 80895.0 48 73278.0 49 65661.0 50 64258.0 51 62855.0 52 55801.0 53 48747.0 54 44462.5 55 40178.0 56 37753.0 57 35328.0 58 32848.0 59 30368.0 60 27946.0 61 25524.0 62 22932.0 63 20340.0 64 17686.5 65 15033.0 66 12594.5 67 10156.0 68 8298.5 69 6441.0 70 5302.5 71 4164.0 72 3400.0 73 2636.0 74 2216.0 75 1346.5 76 897.0 77 629.5 78 362.0 79 258.5 80 155.0 81 115.5 82 76.0 83 71.0 84 66.0 85 42.0 86 18.0 87 11.5 88 5.0 89 4.0 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 677537.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.04657947741991 #Duplication Level Percentage of deduplicated Percentage of total 1 72.74864635560184 22.585966309539067 2 9.419594509142739 5.848923791463364 3 3.490137215994433 3.2507046739041665 4 1.9656168389052442 2.441027176449062 5 1.3871706090363964 2.153345128109473 6 1.080968176092117 2.013621863496333 7 0.880877786519806 1.9143769546356617 8 0.7653647648594051 1.9009566401139457 9 0.6672639910079518 1.86446380763239 >10 7.4437003372889246 45.77513220219948 >50 0.09583083077893843 1.969713728440934 >100 0.04672348963201487 2.5943618033749924 >500 0.0019070812094699947 0.38292999288703744 >1k 0.004767703023674987 2.129872310650012 >5k 0.0014303109071024962 3.1746036171040943 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGC 7693 1.135436145922658 No Hit GAATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTC 6968 1.0284309196398131 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCG 6786 1.0015689180074299 No Hit GCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 2830 0.4176893660420022 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1772 0.26153553237682964 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTT 1463 0.2159291669680032 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCT 1451 0.21415804598125268 No Hit GAACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCT 1382 0.2039741003074371 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGAAACTT 1204 0.17770247233730407 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGAAACTTCGTA 1134 0.16737093324792593 No Hit CCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGC 1083 0.15984366905423616 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTC 1043 0.15393993243173434 No Hit CTGTCTCTTATACACATCTGACGCCCGAAACTTCGTATGCCGTCTTCTGCT 1027 0.15157843778273364 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 686 0.10124908307590581 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.4278024668763477E-4 0.0 0.0 0.16412387810554996 0.0 2 4.4278024668763477E-4 0.0 0.0 0.962604256298918 0.0 3 4.4278024668763477E-4 0.0 0.0 1.2685654067600736 0.0 4 4.4278024668763477E-4 0.0 0.0 1.8649903990483176 0.0 5 4.4278024668763477E-4 0.0 0.0 3.829015979939103 0.0 6 4.4278024668763477E-4 0.0 0.0 4.6184931597831556 0.0 7 4.4278024668763477E-4 0.0 0.0 5.336239939663812 0.0 8 4.4278024668763477E-4 0.0 0.0 6.239806829737712 0.0 9 4.4278024668763477E-4 0.0 0.0 6.51344502219067 0.0 10 4.4278024668763477E-4 0.0 0.0 8.198961827914934 0.0 11 4.4278024668763477E-4 0.0 0.0 9.136770390399343 0.0 12 4.4278024668763477E-4 0.0 0.0 11.087807750720625 0.0 13 4.4278024668763477E-4 0.0 0.0 11.49870781964675 0.0 14 4.4278024668763477E-4 0.0 0.0 11.689250919137995 0.0 15 5.903736622501797E-4 0.0 0.0 12.117567011100501 0.0 16 5.903736622501797E-4 0.0 0.0 12.669271198473293 0.0 17 5.903736622501797E-4 0.0 0.0 13.338459744633873 0.0 18 5.903736622501797E-4 0.0 0.0 14.025654687493082 0.0 19 5.903736622501797E-4 0.0 0.0 14.6611919349054 0.0 20 7.379670778127247E-4 0.0 0.0 15.119764677058226 0.0 21 7.379670778127247E-4 0.0 0.0 15.671321271015458 0.0 22 7.379670778127247E-4 0.0 0.0 16.26641792256364 0.0 23 7.379670778127247E-4 0.0 0.0 16.835242946141687 0.0 24 7.379670778127247E-4 0.0 0.0 17.324957898978212 0.0 25 8.855604933752695E-4 0.0 0.0 17.7348248139954 0.0 26 8.855604933752695E-4 0.0 0.0 18.15148102612846 0.0 27 8.855604933752695E-4 0.0 0.0 18.59632758063397 0.0 28 8.855604933752695E-4 0.0 0.0 19.020953837207415 0.0 29 8.855604933752695E-4 0.0 0.0 19.434953367860352 0.0 30 8.855604933752695E-4 0.0 0.0 19.939722849084255 0.0 31 8.855604933752695E-4 0.0 0.0 20.371581183020265 0.0 32 8.855604933752695E-4 0.0 0.0 20.78602349391989 0.0 33 8.855604933752695E-4 0.0 0.0 21.215520333206896 0.0 34 8.855604933752695E-4 0.0 0.0 21.65018294203859 0.0 35 0.0010331539089378145 0.0 0.0 22.128385608461237 0.0 36 0.0010331539089378145 0.0 0.0 22.57042788807106 0.0 37 0.0010331539089378145 0.0 0.0 22.999924727358064 0.0 38 0.0010331539089378145 0.0 0.0 23.444918875279136 0.0 39 0.0010331539089378145 0.0 0.0 24.025403778686623 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTCG 20 7.031234E-4 45.0 1 GTCGTAG 20 7.031234E-4 45.0 1 ACGTTAG 25 3.8891056E-5 44.999996 1 TAACGCG 25 3.8891056E-5 44.999996 1 TAGCCCG 25 3.8891056E-5 44.999996 1 GCGATAT 50 2.1827873E-11 44.999996 9 CGTACCT 25 3.8891056E-5 44.999996 33 TACGGCT 1000 0.0 40.725 7 CGAATAT 95 0.0 40.26316 14 ACGGCTG 1020 0.0 40.14706 8 CGCATCG 40 3.455425E-7 39.375 21 ATCCGCC 40 3.455425E-7 39.375 18 TTGCGAG 40 3.455425E-7 39.375 1 TGTAGCG 40 3.455425E-7 39.375 1 AACCCGC 35 6.2444924E-6 38.571426 21 GCTATCG 35 6.2444924E-6 38.571426 1 CGATAGT 35 6.2444924E-6 38.571426 10 TAGTACG 35 6.2444924E-6 38.571426 1 CCACCGA 590 0.0 38.51695 15 CTACGAA 100 0.0 38.249996 11 >>END_MODULE