##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935377.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 697301 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.825081277669184 33.0 31.0 34.0 30.0 34.0 2 31.89249262513606 33.0 31.0 34.0 30.0 34.0 3 31.93932462451653 33.0 31.0 34.0 30.0 34.0 4 35.67489792786759 37.0 35.0 37.0 33.0 37.0 5 35.70608532039966 37.0 35.0 37.0 35.0 37.0 6 35.65773604225435 37.0 35.0 37.0 33.0 37.0 7 35.954048538579464 37.0 35.0 37.0 35.0 37.0 8 35.754446071352255 37.0 35.0 37.0 35.0 37.0 9 37.6077848733904 39.0 37.0 39.0 35.0 39.0 10 36.9623376418505 39.0 37.0 39.0 32.0 39.0 11 36.94140550493976 39.0 37.0 39.0 33.0 39.0 12 37.090564906690226 39.0 37.0 39.0 33.0 39.0 13 37.10038562973522 39.0 37.0 39.0 33.0 39.0 14 38.244453973248284 40.0 38.0 41.0 33.0 41.0 15 38.30102495192177 40.0 38.0 41.0 33.0 41.0 16 38.24853112214094 40.0 37.0 41.0 33.0 41.0 17 38.20260834273864 40.0 37.0 41.0 33.0 41.0 18 37.98149579593318 39.0 37.0 41.0 33.0 41.0 19 37.71298334578611 39.0 37.0 41.0 33.0 41.0 20 37.56409498910801 39.0 35.0 41.0 33.0 41.0 21 37.57819076697151 39.0 35.0 41.0 33.0 41.0 22 37.68660162540997 39.0 35.0 41.0 33.0 41.0 23 37.67060422973723 39.0 35.0 41.0 33.0 41.0 24 37.62699752330772 39.0 35.0 41.0 33.0 41.0 25 37.41091293429953 39.0 35.0 41.0 33.0 41.0 26 37.45697051918755 39.0 35.0 41.0 33.0 41.0 27 37.480452487519734 39.0 35.0 41.0 33.0 41.0 28 37.34954488807559 39.0 35.0 41.0 33.0 41.0 29 37.331300256273835 39.0 35.0 41.0 33.0 41.0 30 37.14366966345954 39.0 35.0 41.0 33.0 41.0 31 36.987285261314696 39.0 35.0 41.0 32.0 41.0 32 36.70813465060282 39.0 35.0 41.0 31.0 41.0 33 36.31624506490024 39.0 35.0 41.0 30.0 41.0 34 35.99372437440933 39.0 35.0 41.0 27.0 41.0 35 35.763004785594745 39.0 35.0 41.0 24.0 41.0 36 35.56019423462752 39.0 35.0 41.0 23.0 41.0 37 35.44447089563904 39.0 35.0 41.0 23.0 41.0 38 35.33506763936951 39.0 35.0 41.0 22.0 41.0 39 35.25371539693762 39.0 35.0 41.0 22.0 41.0 40 35.16867894926295 39.0 35.0 41.0 21.0 41.0 41 35.0286103131933 39.0 35.0 41.0 21.0 41.0 42 35.009892428090595 39.0 35.0 41.0 20.0 41.0 43 34.9730575461673 39.0 35.0 41.0 20.0 41.0 44 34.84994428517957 39.0 35.0 41.0 19.0 41.0 45 34.843023314178524 39.0 35.0 41.0 20.0 41.0 46 34.7476556035342 39.0 35.0 40.0 20.0 41.0 47 34.67731295380331 39.0 35.0 40.0 20.0 41.0 48 34.58847183640924 38.0 34.0 40.0 19.0 41.0 49 34.528956648563536 38.0 34.0 40.0 18.0 41.0 50 34.41802750892369 38.0 34.0 40.0 18.0 41.0 51 33.212701544956914 37.0 32.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 3.0 10 5.0 11 8.0 12 8.0 13 15.0 14 15.0 15 29.0 16 49.0 17 120.0 18 223.0 19 495.0 20 895.0 21 1452.0 22 2290.0 23 3450.0 24 5316.0 25 9497.0 26 14751.0 27 16603.0 28 15217.0 29 13410.0 30 13295.0 31 15058.0 32 18138.0 33 23373.0 34 35689.0 35 44460.0 36 51631.0 37 75101.0 38 140709.0 39 195929.0 40 61.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.53070911987793 19.90417337706385 23.062493815439815 20.502623687618403 2 38.15769660447927 24.86544548193678 22.715011164475598 14.261846749108347 3 26.225690196916396 25.07310329398639 35.24647175323139 13.454734755865832 4 23.207338007546237 22.4709271892626 38.922789441001804 15.398945362189357 5 24.29524695934754 26.38444516786868 33.06448721570742 16.255820657076356 6 22.260544585480304 32.32821980751498 32.171902808112996 13.239332798891725 7 70.63205129492141 4.586828356764152 20.63871986416196 4.142400484152468 8 71.99473398145135 6.285951117236316 17.5244263237827 4.194888577529646 9 66.40116678450197 6.5362017263706775 18.770946836445095 8.291684652682271 10 31.499739710684484 30.846936975567225 25.160583449615014 12.49273986413328 11 22.988350798292274 23.640866713227144 36.30784983816171 17.06293265031887 12 20.761478902224432 21.079849304676173 38.99736268842293 19.161309104676462 13 20.894563466852908 22.150549045534138 40.772779617410556 16.182107870202394 14 18.200748313855854 27.057468725844362 36.88564909558426 17.856133864715524 15 16.64288449321025 25.511938173041482 40.49269970930774 17.35247762444052 16 19.055042227101353 26.038109797634018 36.027483109876506 18.87936486538812 17 19.65306230738232 25.45127570446622 35.44695906072127 19.44870292743019 18 19.74828660793545 25.44711681182158 35.68258184055379 19.12201473968917 19 18.876783483746618 26.841493128505476 34.36277877129102 19.918944616456884 20 19.964118795183143 26.35203448725873 35.99220422744267 17.69164249011546 21 20.325368814902028 26.924670981398275 35.85438712980478 16.89557307389492 22 19.343439920493445 23.278899643052284 36.30784983816171 21.06981059829256 23 18.378003186572226 26.220527433633396 36.10836640131019 19.293102978484182 24 19.465768728282335 25.00082460802437 35.381850879318975 20.151555784374324 25 18.531882214423902 28.63440608861883 33.616042426441375 19.217669270515888 26 18.411561147911733 26.218232872174283 34.69362585167668 20.676580128237305 27 19.72419371261478 25.682165951289328 34.13188852446791 20.461751811627977 28 17.48484513861302 25.65118937159132 36.44882195780588 20.41514353198977 29 18.38804189295584 23.845943143635246 36.89611803224146 20.86989693116746 30 18.0359701190734 25.490139839179925 35.51264088248834 20.96124915925834 31 18.883093527759172 26.150256488948102 33.868444186943655 21.098205796349063 32 19.942177051230388 26.27129460591624 34.499305178108166 19.28722316474521 33 19.22096770261336 24.948336514647192 33.001817005855436 22.828878776884014 34 19.184541539449963 25.11827747271265 35.20660374787932 20.490577239958068 35 20.40381413478541 24.739818242050422 32.95291416475812 21.903453458406055 36 21.539622057045666 26.62207568897793 31.98403558864823 19.854266665328172 37 20.320062641527834 25.96138539884498 33.74668901951955 19.97186294010764 38 20.295109285659997 27.06722061204559 30.848514486570362 21.789155615724056 39 21.389758511747438 25.147963361589902 32.98733258664479 20.47494554001787 40 21.83820186691257 24.626237449824394 32.95119324366379 20.584367439599255 41 21.063930784553587 25.938870014527442 32.15125175498099 20.84594744593798 42 21.758035625934856 25.575612253531833 32.234429607873786 20.431922512659526 43 22.43120259400173 25.35160569108606 30.81395265459249 21.403239060319716 44 20.927834608010027 25.697941061320723 31.09188141132739 22.282342919341865 45 20.10236612309462 24.512226427324784 31.018885674909402 24.366521774671195 46 22.12889412176377 25.43420990361408 30.53516343731043 21.901732537311723 47 19.823290085630166 24.35232417564294 34.289352804599446 21.535032934127443 48 20.249935106933734 25.0520220105808 32.029783407739274 22.6682594747462 49 20.052602821450133 23.87075308941189 33.81108015046587 22.26556393867211 50 19.930847654026024 23.42618180670901 33.61819357780929 23.02477696145567 51 19.46691600901189 23.277035311866754 31.71456802729381 25.54148065182755 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 303.0 1 477.0 2 651.0 3 10494.0 4 20337.0 5 13767.5 6 7198.0 7 7152.5 8 7107.0 9 7029.0 10 6951.0 11 6907.0 12 6863.0 13 6697.5 14 6532.0 15 6324.0 16 6116.0 17 5778.0 18 5440.0 19 5234.5 20 5029.0 21 4858.5 22 4688.0 23 4585.0 24 4482.0 25 4927.0 26 6172.5 27 6973.0 28 7697.5 29 8422.0 30 10175.0 31 11928.0 32 14045.0 33 16162.0 34 18126.5 35 20091.0 36 22037.0 37 23983.0 38 25932.0 39 27881.0 40 30497.5 41 33114.0 42 36336.0 43 39558.0 44 43726.5 45 47895.0 46 67802.0 47 87709.0 48 79239.5 49 70770.0 50 66378.0 51 61986.0 52 52123.0 53 42260.0 54 36833.0 55 31406.0 56 27560.0 57 23714.0 58 20989.5 59 18265.0 60 16343.0 61 14421.0 62 12112.5 63 9804.0 64 7991.0 65 6178.0 66 4826.0 67 3474.0 68 2626.0 69 1778.0 70 1429.0 71 1080.0 72 853.0 73 626.0 74 488.5 75 283.5 76 216.0 77 163.0 78 110.0 79 74.0 80 38.0 81 22.5 82 7.0 83 13.0 84 19.0 85 11.5 86 4.0 87 4.5 88 5.0 89 2.5 90 0.0 91 1.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 697301.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.21371180447882 #Duplication Level Percentage of deduplicated Percentage of total 1 75.5330378347033 31.885298908709604 2 8.85704849378197 7.477777851096105 3 3.8144987277259776 4.830724499123265 4 2.252275410911452 3.8030762040212065 5 1.6449296277537602 3.471929262232293 6 1.279880593513993 3.2417106311247004 7 1.0330309623162786 3.052564992982596 8 0.8453510343252033 2.854832394929778 9 0.6925854415826505 2.6312942007852937 >10 3.9861057352079023 26.375216546927444 >50 0.03879555617497028 1.1074616724208886 >100 0.014973721335026556 1.1249878573347594 >500 0.0020418710911399096 0.6408595111186635 >1k 0.004083742182279819 3.0525944298947496 >5k 0.0010209355455699548 2.6138620947778706 >10k+ 3.403118485233183E-4 1.8358089425208248 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12779 1.8326375553742213 No Hit GAATCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTC 7518 1.078157065600078 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGC 5481 0.7860307098369284 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCG 5196 0.7451588338465025 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTT 2994 0.4293698130362641 No Hit GAACTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCT 2533 0.36325776099561025 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTC 2489 0.3569477169830532 No Hit GCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCTGC 2296 0.32926956938251917 No Hit CGCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCTG 2076 0.2977193493197342 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCT 1709 0.24508784585136117 No Hit CGTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCT 1507 0.2161190074300768 No Hit CCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCTGC 1248 0.17897579381070727 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTT 1168 0.1675029865151491 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCT 1135 0.16277045350573138 No Hit CTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTCTTCTGCT 1069 0.1533053874868959 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTC 1025 0.1469953434743389 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCATCTGGT 939 0.1346620756316139 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCC 849 0.12175516742411097 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCATCTGGTCGTA 764 0.10956530967258042 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCATCTGGTCGTATGCCGTC 753 0.10798779866944117 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.86820182388954E-4 0.0 0.0 0.1639177342352872 0.0 2 2.86820182388954E-4 0.0 0.0 0.8141390877110459 0.0 3 4.3023027358343095E-4 0.0 0.0 1.3479114471368892 0.0 4 4.3023027358343095E-4 0.0 0.0 2.226441665794255 0.0 5 4.3023027358343095E-4 0.0 0.0 4.4791273782770995 0.0 6 5.73640364777908E-4 0.0 0.0 5.978479881715357 0.0 7 5.73640364777908E-4 0.0 0.0 7.095501082029138 0.0 8 5.73640364777908E-4 0.0 0.0 8.353350991895896 0.0 9 5.73640364777908E-4 0.0 0.0 8.984929033516373 0.0 10 5.73640364777908E-4 0.0 0.0 10.642749687724526 0.0 11 5.73640364777908E-4 0.0 0.0 11.648341247180198 0.0 12 5.73640364777908E-4 0.0 0.0 13.29038679135696 0.0 13 5.73640364777908E-4 0.0 0.0 13.79519031236152 0.0 14 5.73640364777908E-4 0.0 0.0 14.060929211344886 0.0 15 5.73640364777908E-4 0.0 0.0 14.427341994346774 0.0 16 5.73640364777908E-4 0.0 0.0 14.90575805857155 0.0 17 5.73640364777908E-4 0.0 0.0 15.506789750767602 0.0 18 7.17050455972385E-4 0.0 0.0 16.208782147164566 0.0 19 7.17050455972385E-4 0.0 0.0 16.779124079845 0.0 20 7.17050455972385E-4 0.0 0.0 17.24319913495033 0.0 21 8.604605471668619E-4 0.0 0.0 17.72018109826316 0.0 22 0.0010038706383613389 0.0 0.0 18.27876340346565 0.0 23 0.0010038706383613389 0.0 0.0 18.82142718854555 0.0 24 0.0010038706383613389 0.0 0.0 19.259401607053483 0.0 25 0.0010038706383613389 0.0 0.0 19.647469313825738 0.0 26 0.0010038706383613389 0.0 0.0 20.038548632513077 0.0 27 0.0010038706383613389 0.0 0.0 20.446550341961363 0.0 28 0.0010038706383613389 0.0 0.0 20.871617852261792 0.0 29 0.0010038706383613389 0.0 0.0 21.298979924021335 0.0 30 0.001147280729555816 0.0 0.0 21.853116516396792 0.0 31 0.001290690820750293 0.0 0.0 22.296540518370115 0.0 32 0.001290690820750293 0.0 0.0 22.72332894976488 0.0 33 0.001290690820750293 0.0 0.0 23.13979185459364 0.0 34 0.00143410091194477 0.0 0.0 23.565289595167652 0.0 35 0.00143410091194477 0.0 0.0 24.015023641153533 0.0 36 0.00143410091194477 0.0 0.0 24.45443216057341 0.0 37 0.00143410091194477 0.0 0.0 24.862290459930502 0.0 38 0.0015775110031392469 0.0 0.0 25.305140821539048 0.0 39 0.0017209210943337238 0.0 0.0 25.75659578861926 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGGTA 20 7.0313766E-4 45.0 5 GTCGATG 20 7.0313766E-4 45.0 1 GTACGAG 20 7.0313766E-4 45.0 1 AGTTGCG 30 2.1642682E-6 44.999996 1 TTGCGCG 30 2.1642682E-6 44.999996 1 CGTTTTT 7895 0.0 44.145027 1 GCGTAAG 60 3.6379788E-12 41.249996 1 CGTAAGG 110 0.0 40.909092 2 CGAACGG 50 1.0804797E-9 40.499996 2 TAGTGCG 50 1.0804797E-9 40.499996 1 TATAGCG 45 1.9264917E-8 40.0 1 TCGACGG 40 3.455607E-7 39.375 2 GTTTTTT 8910 0.0 39.141415 2 CTAGCGG 75 0.0 39.000004 2 GCGATCG 35 6.2447543E-6 38.57143 9 TTACCGG 35 6.2447543E-6 38.57143 2 TGCGTAG 35 6.2447543E-6 38.57143 1 CGTTCTG 380 0.0 38.486843 1 CGTTTTC 195 0.0 38.076923 1 GGCGATC 125 0.0 37.8 8 >>END_MODULE