##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935376.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 603825 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.925862625760775 33.0 31.0 34.0 30.0 34.0 2 31.990286920879395 33.0 31.0 34.0 30.0 34.0 3 32.041367946010844 33.0 31.0 34.0 30.0 34.0 4 35.751244151865194 37.0 35.0 37.0 35.0 37.0 5 35.76732165776508 37.0 35.0 37.0 35.0 37.0 6 35.70226472901917 37.0 35.0 37.0 33.0 37.0 7 35.970961785285475 37.0 35.0 37.0 35.0 37.0 8 35.79271974495922 37.0 35.0 37.0 35.0 37.0 9 37.62006044797748 39.0 37.0 39.0 35.0 39.0 10 37.088764128679664 39.0 37.0 39.0 33.0 39.0 11 37.03582826149961 39.0 37.0 39.0 33.0 39.0 12 37.08186312259347 39.0 37.0 39.0 33.0 39.0 13 37.046026580549 39.0 37.0 39.0 33.0 39.0 14 38.086828137291434 40.0 37.0 41.0 33.0 41.0 15 38.17798037510868 40.0 38.0 41.0 33.0 41.0 16 38.14502877489339 40.0 37.0 41.0 33.0 41.0 17 38.13323231068604 40.0 37.0 41.0 33.0 41.0 18 37.92110131246636 39.0 37.0 41.0 33.0 41.0 19 37.678415103713824 39.0 37.0 41.0 33.0 41.0 20 37.528234173808634 39.0 35.0 41.0 33.0 41.0 21 37.50025586883617 39.0 35.0 41.0 33.0 41.0 22 37.627254585351714 39.0 35.0 41.0 33.0 41.0 23 37.62491781559227 39.0 35.0 41.0 33.0 41.0 24 37.59712996315157 39.0 35.0 41.0 33.0 41.0 25 37.365566182254796 39.0 35.0 41.0 33.0 41.0 26 37.40873928704509 39.0 35.0 41.0 33.0 41.0 27 37.43391379952801 39.0 35.0 41.0 33.0 41.0 28 37.29147352295781 39.0 35.0 41.0 33.0 41.0 29 37.22301163416553 39.0 35.0 41.0 33.0 41.0 30 37.003524199892354 39.0 35.0 41.0 32.0 41.0 31 36.81466981327371 39.0 35.0 41.0 31.0 41.0 32 36.52470666169834 39.0 35.0 41.0 31.0 41.0 33 36.14409638554217 39.0 35.0 41.0 30.0 41.0 34 35.80619053533722 39.0 35.0 41.0 26.0 41.0 35 35.597853682772325 39.0 35.0 41.0 24.0 41.0 36 35.42188879228253 39.0 35.0 41.0 23.0 41.0 37 35.34438454850329 39.0 35.0 41.0 23.0 41.0 38 35.21506231110007 39.0 35.0 41.0 23.0 41.0 39 35.12688444499648 39.0 35.0 41.0 22.0 41.0 40 34.988327743965556 39.0 35.0 41.0 21.0 41.0 41 34.82958638678425 39.0 35.0 41.0 20.0 41.0 42 34.85642197656606 39.0 35.0 41.0 21.0 41.0 43 34.813391297147355 39.0 35.0 41.0 20.0 41.0 44 34.693368111621744 38.0 34.0 41.0 20.0 41.0 45 34.653921252018385 38.0 34.0 40.0 20.0 41.0 46 34.55851281414317 38.0 34.0 40.0 20.0 41.0 47 34.47270980830539 38.0 34.0 40.0 20.0 41.0 48 34.37465656440194 38.0 34.0 40.0 20.0 41.0 49 34.31846147476504 38.0 34.0 40.0 20.0 41.0 50 34.21396927917857 38.0 34.0 40.0 20.0 41.0 51 33.094898356311845 36.0 32.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 8.0 11 4.0 12 13.0 13 11.0 14 18.0 15 26.0 16 57.0 17 126.0 18 267.0 19 443.0 20 850.0 21 1298.0 22 2043.0 23 2852.0 24 4542.0 25 7764.0 26 12162.0 27 14278.0 28 13756.0 29 12629.0 30 12306.0 31 13822.0 32 16675.0 33 21805.0 34 34953.0 35 38933.0 36 45577.0 37 63916.0 38 115272.0 39 167352.0 40 59.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.032666749472114 19.02123959756552 21.62861756303565 20.317476089926718 2 38.85364136960212 24.150705916449304 22.16983397507556 14.825818738873018 3 27.792655156709312 24.173560220262495 33.35320664099698 14.680577982031217 4 24.64406077919927 22.45021322403014 36.06243530824329 16.843290688527304 5 24.418829959011305 25.706785906512646 32.586925019666296 17.287459114809756 6 23.1676396306877 31.6426116838488 31.763838860597026 13.425909824866475 7 71.46954829627789 4.989690721649485 19.377799859230738 4.162961122841883 8 72.87011965387322 5.938641162588498 17.245890779613298 3.945348403924978 9 66.59992547509627 6.79832732993831 18.856787976648864 7.7449592183165645 10 33.68856870782098 29.679625719372332 24.50958473067528 12.122220842131412 11 25.39494058709063 22.63751914875999 35.01378710719165 16.953753156957728 12 22.743675733863288 20.764459901461514 37.953049310644644 18.538815054030554 13 22.66931644102182 20.815633668695398 39.76731668943817 16.747733200844618 14 18.653417794890903 25.609903531652385 37.71225106612015 18.024427607336563 15 17.507721608081813 24.273920423963897 40.26067155218813 17.957686415766158 16 21.638719827764668 25.319090796174386 35.34103424005299 17.701155136007948 17 21.827019417877697 24.552643563946507 34.890903821471454 18.729433196704342 18 21.748354241709105 24.087773775514428 35.34269034902496 18.8211816337515 19 21.304351426323855 25.551111663147434 33.77352709808306 19.371009812445656 20 21.59152072206351 26.143170620626837 34.66915083012462 17.59615782718503 21 21.765246553223204 26.006872852233677 35.98476379745787 16.243116797085246 22 21.082929656771416 22.11451993541175 36.67917028940504 20.12338011841179 23 19.51774106736223 24.618059868339337 36.76677845402227 19.097420610276156 24 20.314660704674367 24.318304144412703 35.431292179025384 19.93574297188755 25 20.987537779985924 26.558357139899808 33.37192067238025 19.08218440773403 26 20.32724713286134 24.943154059537118 33.62298679253095 21.106612015070592 27 21.225355028360866 24.22224982403842 34.37353537862791 20.1788597689728 28 19.832898604728193 24.51223450503043 35.11828758332298 20.536579306918394 29 22.285264770421893 24.253881505403054 33.963814018962445 19.497039705212604 30 23.113319256407074 24.300086945721027 34.323686498571604 18.262907299300295 31 23.040450461640376 23.621082267213183 33.84258684221422 19.495880428932225 32 23.33805324390345 26.589657599470044 32.49997929863785 17.572309857988657 33 22.56630646296526 26.241543493561874 31.60120895954954 19.590941083923322 34 22.546101933507227 26.483004181675152 32.60828882540471 18.36260505941291 35 22.09431540595371 27.950647952635283 30.479526352834018 19.475510288576988 36 22.45700327081522 27.907092286672462 29.894919885728484 19.740984556783836 37 21.800852896120563 28.279882416262993 30.475386080404093 19.443878607212355 38 21.024303399163667 28.549000124208174 30.211236699374822 20.215459777253344 39 22.091168798906967 26.732248581956693 29.65743385914793 21.519148759988408 40 22.399039456796256 26.838239556162797 31.060158158406825 19.702562828634125 41 21.25350888088436 26.72164948453608 30.304475634496754 21.720366000082805 42 21.0614002401358 26.96857533225686 31.680702190204112 20.28932223740322 43 21.798037510868216 25.731461930195003 30.635034985302035 21.835465573634746 44 21.90717509212106 25.501925226679916 30.850825984349772 21.74007369684925 45 21.166231938061525 24.874922369891937 30.49111911563781 23.46772657640873 46 22.268538069804993 25.82387281083095 29.942118991429634 21.96547012793442 47 20.501469796712623 25.673663727073244 33.08872603817331 20.736140438040824 48 20.659793814432987 26.09431540595371 31.454146482838567 21.79174429677473 49 21.31329441477249 24.892311514097628 32.310851654038835 21.483542417091044 50 20.026497743551523 25.26079576036103 33.00972964021033 21.702976855877118 51 20.558936778039996 24.748726866227795 31.25856001324887 23.433776342483338 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 306.0 1 500.0 2 694.0 3 10068.5 4 19443.0 5 12977.0 6 6511.0 7 6473.0 8 6435.0 9 6336.5 10 6238.0 11 6074.5 12 5911.0 13 5591.5 14 5272.0 15 5103.5 16 4935.0 17 4605.5 18 4276.0 19 4102.0 20 3928.0 21 3913.5 22 3899.0 23 4089.0 24 4279.0 25 4497.5 26 5518.0 27 6320.0 28 7191.5 29 8063.0 30 9476.5 31 10890.0 32 12322.5 33 13755.0 34 15361.5 35 16968.0 36 18355.0 37 19742.0 38 21368.5 39 22995.0 40 24644.5 41 26294.0 42 28536.5 43 30779.0 44 32912.0 45 35045.0 46 47291.5 47 59538.0 48 55174.5 49 50811.0 50 49365.0 51 47919.0 52 42415.5 53 36912.0 54 33844.5 55 30777.0 56 28482.0 57 26187.0 58 24065.0 59 21943.0 60 20227.5 61 18512.0 62 16339.5 63 14167.0 64 12078.5 65 9990.0 66 8492.5 67 6995.0 68 5878.0 69 4761.0 70 4024.5 71 3288.0 72 2667.5 73 2047.0 74 1560.0 75 843.5 76 614.0 77 479.0 78 344.0 79 234.0 80 124.0 81 101.0 82 78.0 83 56.5 84 35.0 85 20.0 86 5.0 87 4.5 88 4.0 89 4.0 90 4.0 91 3.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 603825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.510565459630506 #Duplication Level Percentage of deduplicated Percentage of total 1 72.2994383423422 28.565916913196315 2 8.61768633222486 6.809793198798671 3 4.146735313330225 4.915195711232859 4 2.8003476059789176 4.425732695829984 5 2.077338332467832 4.103840608338498 6 1.6679081855599969 3.953999732773308 7 1.3550546573629818 3.7477283018782095 8 1.151433089591591 3.6395017966954524 9 0.9662949079034993 3.4360972390825952 >10 4.864817357319177 28.490247865879187 >50 0.031515402359796364 0.8628346047774228 >100 0.014707187736495929 1.2003644761145595 >500 0.002941437547299186 0.8297955258119735 >1k 0.002941437547299186 2.1038753307501654 >5k 4.2020536389988363E-4 0.9805466937666099 >10k+ 4.2020536389988363E-4 1.9345293050742527 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11652 1.9296981741398582 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 5906 0.9780979588456921 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCG 2958 0.48987703390883125 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGC 2745 0.45460191280586265 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 1789 0.2962778950854966 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTT 1408 0.23318014325342606 No Hit GCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTGC 1324 0.2192688278888751 TruSeq Adapter, Index 14 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTT 1235 0.20452945803833894 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCTG 1213 0.20088601830000413 TruSeq Adapter, Index 15 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTC 991 0.16412039912226223 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 832 0.13778826646793357 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCT 775 0.12834844532770256 No Hit CGTCTGTCTCTTATACACATCTGACGCGGTAAGACTCGTATGCCGTCTTCT 735 0.12172400943982113 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.280544859851778E-4 0.0 0.0 0.08976110628079327 0.0 2 8.280544859851778E-4 0.0 0.0 0.46586345381526106 0.0 3 8.280544859851778E-4 0.0 0.0 0.8321947584151037 0.0 4 8.280544859851778E-4 0.0 0.0 1.462675444044218 0.0 5 8.280544859851778E-4 0.0 0.0 3.1972839812859686 0.0 6 8.280544859851778E-4 0.0 0.0 4.433734939759036 0.0 7 8.280544859851778E-4 0.0 0.0 5.314122469258478 0.0 8 8.280544859851778E-4 0.0 0.0 6.322527222291226 0.0 9 8.280544859851778E-4 0.0 0.0 6.9124332381070674 0.0 10 8.280544859851778E-4 0.0 0.0 8.110462468430423 0.0 11 8.280544859851778E-4 0.0 0.0 8.789798368732663 0.0 12 8.280544859851778E-4 0.0 0.0 9.812942491615948 0.0 13 8.280544859851778E-4 0.0 0.0 10.175299134683062 0.0 14 8.280544859851778E-4 0.0 0.0 10.429180640086118 0.0 15 8.280544859851778E-4 0.0 0.0 10.67759698588167 0.0 16 8.280544859851778E-4 0.0 0.0 10.958638678425041 0.0 17 8.280544859851778E-4 0.0 0.0 11.2681654452863 0.0 18 8.280544859851778E-4 0.0 0.0 11.630687699250611 0.0 19 9.936653831822133E-4 0.0 0.0 11.936571026373535 0.0 20 9.936653831822133E-4 0.0 0.0 12.192108640748561 0.0 21 9.936653831822133E-4 0.0 0.0 12.458410963441395 0.0 22 9.936653831822133E-4 0.0 0.0 12.778868049517659 0.0 23 9.936653831822133E-4 0.0 0.0 13.083426489463006 0.0 24 9.936653831822133E-4 0.0 0.0 13.337307994866062 0.0 25 9.936653831822133E-4 0.0 0.0 13.574959632343809 0.0 26 0.001159276280379249 0.0 0.0 13.821057425578603 0.0 27 0.001159276280379249 0.0 0.0 14.112035771953794 0.0 28 0.001159276280379249 0.0 0.0 14.369560717095185 0.0 29 0.001159276280379249 0.0 0.0 14.656564401937647 0.0 30 0.001159276280379249 0.0 0.0 15.04690928663106 0.0 31 0.001159276280379249 0.0 0.0 15.344015236202543 0.0 32 0.001159276280379249 0.0 0.0 15.650395396017059 0.0 33 0.001159276280379249 0.0 0.0 15.94187057508384 0.0 34 0.001159276280379249 0.0 0.0 16.25090050925351 0.0 35 0.001159276280379249 0.0 0.0 16.554962116507266 0.0 36 0.0014904980747733202 0.0 0.0 16.832691591106695 0.0 37 0.0014904980747733202 0.0 0.0 17.12963192978098 0.0 38 0.0014904980747733202 0.0 0.0 17.483873638885438 0.0 39 0.0016561089719703556 0.0 0.0 18.0166438951683 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTGCG 20 7.030623E-4 45.000004 1 ATGCGAG 20 7.030623E-4 45.000004 1 ATAACGC 20 7.030623E-4 45.000004 11 CGAATAT 35 1.2106466E-7 45.0 14 CGTTTTT 6880 0.0 43.78997 1 CACGGGC 45 1.925764E-8 40.000004 4 CGGTCTA 45 1.925764E-8 40.000004 31 ACGGTCT 45 1.925764E-8 40.000004 30 GCTACGA 40 3.4545883E-7 39.375004 10 CTAAACG 35 6.243363E-6 38.571426 1 GTTTTTT 8045 0.0 37.756367 2 TCGACGG 30 1.1392803E-4 37.499996 2 CGTTTCT 245 0.0 36.734695 1 CGGGCGA 205 0.0 36.219513 6 CGGGTAC 25 0.0021063178 36.000004 6 ACGCCGA 25 0.0021063178 36.000004 12 GAGTACG 25 0.0021063178 36.000004 1 CCATACG 25 0.0021063178 36.000004 2 GTACTAG 25 0.0021063178 36.000004 1 CGTAAGG 75 1.8189894E-12 36.0 2 >>END_MODULE