##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935375.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 626582 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.75864611495383 31.0 31.0 34.0 30.0 34.0 2 31.816494888139143 33.0 31.0 34.0 30.0 34.0 3 31.898445853854724 33.0 31.0 34.0 30.0 34.0 4 35.64256234618932 37.0 35.0 37.0 33.0 37.0 5 35.652257805043874 37.0 35.0 37.0 33.0 37.0 6 35.585872240185644 37.0 35.0 37.0 33.0 37.0 7 35.87914430992272 37.0 35.0 37.0 35.0 37.0 8 35.6566530797246 37.0 35.0 37.0 33.0 37.0 9 37.502593435496074 39.0 37.0 39.0 35.0 39.0 10 36.7259943630682 39.0 35.0 39.0 32.0 39.0 11 36.829051903821046 39.0 37.0 39.0 32.0 39.0 12 36.922903945533065 39.0 37.0 39.0 33.0 39.0 13 36.85600448145654 39.0 37.0 39.0 33.0 39.0 14 37.88958189031922 40.0 37.0 41.0 33.0 41.0 15 37.95002729092122 40.0 37.0 41.0 33.0 41.0 16 37.97331075581488 40.0 37.0 41.0 33.0 41.0 17 37.92822008930994 40.0 37.0 41.0 33.0 41.0 18 37.77864668949954 39.0 37.0 41.0 33.0 41.0 19 37.56027942073025 39.0 37.0 41.0 33.0 41.0 20 37.40881799987871 39.0 35.0 41.0 32.0 41.0 21 37.47531049407739 39.0 35.0 41.0 33.0 41.0 22 37.60938233144265 39.0 35.0 41.0 33.0 41.0 23 37.6001401253148 39.0 35.0 41.0 33.0 41.0 24 37.56107740088289 39.0 35.0 41.0 33.0 41.0 25 37.358904341331225 39.0 35.0 41.0 33.0 41.0 26 37.410066040837435 39.0 35.0 41.0 33.0 41.0 27 37.408669575570315 39.0 35.0 41.0 33.0 41.0 28 37.27863232585679 39.0 35.0 41.0 33.0 41.0 29 37.22449894826216 39.0 35.0 41.0 33.0 41.0 30 37.050791436715386 39.0 35.0 41.0 32.0 41.0 31 36.97849922276733 39.0 35.0 41.0 32.0 41.0 32 36.74067081403551 39.0 35.0 41.0 31.0 41.0 33 36.33342004717659 39.0 35.0 41.0 30.0 41.0 34 36.12617662173506 39.0 35.0 41.0 29.0 41.0 35 35.887345949931536 39.0 35.0 41.0 27.0 41.0 36 35.7845341870657 39.0 35.0 41.0 26.0 41.0 37 35.710221487371165 39.0 35.0 41.0 25.0 41.0 38 35.63006597699902 39.0 35.0 41.0 25.0 41.0 39 35.51455834990472 39.0 35.0 41.0 24.0 41.0 40 35.35542195594511 39.0 35.0 41.0 23.0 41.0 41 35.23449125573349 39.0 35.0 41.0 23.0 41.0 42 35.32464066953727 39.0 35.0 41.0 23.0 41.0 43 35.294751524940075 39.0 35.0 41.0 23.0 41.0 44 35.202548110223404 39.0 35.0 41.0 23.0 41.0 45 35.184579193146305 39.0 35.0 40.0 23.0 41.0 46 34.99612979625971 39.0 35.0 40.0 23.0 41.0 47 34.857239754732824 38.0 34.0 40.0 23.0 41.0 48 34.77766996179271 38.0 34.0 40.0 23.0 41.0 49 34.697678835332006 38.0 34.0 40.0 23.0 41.0 50 34.51602663338557 38.0 34.0 40.0 22.0 41.0 51 33.345914820406584 36.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 5.0 11 7.0 12 10.0 13 7.0 14 20.0 15 22.0 16 45.0 17 92.0 18 211.0 19 466.0 20 985.0 21 1633.0 22 2246.0 23 3175.0 24 4712.0 25 7653.0 26 11476.0 27 12491.0 28 12092.0 29 10999.0 30 11889.0 31 13982.0 32 17889.0 33 23813.0 34 37126.0 35 42721.0 36 47431.0 37 69922.0 38 128234.0 39 165173.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11021063484109 18.731147718893936 23.021886999626545 16.13675464663843 2 34.401722360361454 28.73446731632891 22.408399858278724 14.455410465030912 3 26.751965425115948 28.020275079718214 31.24188055194691 13.985878943218925 4 23.743739845702557 22.331314975533928 37.76281476327121 16.162130415492307 5 26.402609714291188 26.36765818360566 30.400649875036308 16.82908222706685 6 21.891468315400058 34.3480980941042 30.633819675637024 13.126613914858709 7 71.51673683572142 4.82155567826717 19.597754164658415 4.063953321352991 8 73.04231529153407 7.686623618297365 14.87147731661618 4.399583773552384 9 68.33423239097198 5.426424633966504 15.833202996575068 10.406139978486454 10 35.252688395134236 23.45997810342461 25.20372433296839 16.083609168472762 11 27.55265871027256 24.94278482305588 29.83169002620567 17.672866440465892 12 23.23590527656396 21.07960330810652 34.41895873165843 21.265532683671093 13 22.510700913846872 22.480377668046643 37.48958635900808 17.51933505909841 14 19.413739941460175 27.78040224583534 33.79414027214315 19.01171754056133 15 18.028446396481225 25.060087905493617 38.900255672840906 18.011210025184255 16 20.7061485966721 25.08227175373694 32.88236814973938 21.329211499851574 17 21.445397410075618 25.64803968195703 33.086012684692506 19.820550223274847 18 21.36113070595708 25.26149809601936 33.00461870912347 20.372752488900094 19 20.666249589040223 27.154785806167432 31.118991608440716 21.059972996351632 20 21.329051903821046 26.989923106632492 33.97560095885295 17.70542403069351 21 20.474574756376658 28.477198515118534 33.61443514176916 17.433791586735655 22 19.38628942420944 23.102642591073476 34.96302159972677 22.54804638499031 23 19.620576397023854 26.71158762939248 34.57520324554488 19.09263272803879 24 20.539530340801363 25.376886026090762 33.04387933263324 21.03970430047464 25 19.602063257482662 30.086724482988657 30.72143789639664 19.58977436313204 26 19.35006112527969 25.52993861936666 32.42257198578957 22.697428269564078 27 21.324742810996806 26.51257137932465 31.261351267671273 20.901334542007273 28 18.426319300586353 25.973136796141606 33.63566141382932 21.964882489442722 29 22.589700948957997 24.752546354667064 31.33891493850765 21.318837757867286 30 20.62363744888937 28.54917632488645 31.532345327507016 19.294840898717165 31 21.792518776472992 25.548611354938377 29.67720106865502 22.98166879993361 32 24.546827071317082 27.503183940809024 28.57870159053404 19.371287397339852 33 20.729928405220704 27.403276825698793 29.04823311234603 22.818561656734474 34 21.79922180975515 25.8357246138574 31.63017769422039 20.73487588216706 35 20.572247527059506 29.269433210657187 28.623388479081747 21.53493078320156 36 21.400231733436325 28.25408326444105 27.504460709053248 22.84122429306938 37 20.7768496381958 28.260467105662144 30.34686601274853 20.615817243393522 38 19.81464517014533 28.64844505587457 27.26889696799461 24.26801280598549 39 22.53272516605967 25.606544714019876 29.762584944987246 22.098145174933208 40 21.180627595430444 27.958671011934594 30.720001532121895 20.14069986051307 41 19.27329543459595 27.094139314566966 29.782853640864243 23.849711609972836 42 20.339396918519842 27.26985454417778 30.709627790137606 21.681120747164776 43 21.633401534037045 25.69591849111529 28.49746721099553 24.173212763852135 44 21.856676380745057 25.198457663960983 29.233683699819018 23.71118225547494 45 20.814993089491878 24.376059318652626 28.87570980334577 25.93323778850972 46 23.857691411499214 26.303181387272534 28.085390260173448 21.753736941054804 47 19.443424803138296 25.4142314972342 33.43185728284566 21.71048641678184 48 20.304285791803785 26.235512670328866 29.624534378580936 23.835667159286412 49 20.276196890430942 24.136505676830804 32.791398412338694 22.795899020399567 50 20.456380808896522 23.905410624626946 31.62459183315193 24.013616733324607 51 19.97073008800125 23.98121873912752 29.499570686677878 26.54848048619335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 230.0 1 380.5 2 531.0 3 6852.0 4 13173.0 5 8972.5 6 4772.0 7 4755.0 8 4738.0 9 4699.5 10 4661.0 11 4577.5 12 4494.0 13 4344.0 14 4194.0 15 4028.0 16 3862.0 17 3626.5 18 3391.0 19 3253.0 20 3115.0 21 3052.0 22 2989.0 23 3096.0 24 3203.0 25 3449.5 26 4188.5 27 4681.0 28 5488.5 29 6296.0 30 7635.5 31 8975.0 32 10547.5 33 12120.0 34 14157.5 35 16195.0 36 18005.5 37 19816.0 38 21616.5 39 23417.0 40 26267.5 41 29118.0 42 31185.0 43 33252.0 44 37124.0 45 40996.0 46 63862.5 47 86729.0 48 75294.0 49 63859.0 50 60875.5 51 57892.0 52 50532.5 53 43173.0 54 38363.0 55 33553.0 56 30076.0 57 26599.0 58 23592.5 59 20586.0 60 18176.0 61 15766.0 62 13229.5 63 10693.0 64 8775.5 65 6858.0 66 5408.0 67 3958.0 68 2912.0 69 1866.0 70 1667.5 71 1469.0 72 1076.0 73 683.0 74 579.0 75 385.0 76 295.0 77 201.5 78 108.0 79 80.5 80 53.0 81 39.0 82 25.0 83 21.0 84 17.0 85 10.5 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 626582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.307033941525624 #Duplication Level Percentage of deduplicated Percentage of total 1 75.52584403818821 29.686969150714347 2 8.716541404293283 6.852427776625392 3 3.6345808776314525 4.285937817608385 4 2.220273232754769 3.490894212774102 5 1.5344163487423939 3.0156677750224548 6 1.192668792010991 2.812816361314464 7 0.9680888369340767 2.663689054024587 8 0.7977832500369453 2.508679462974627 9 0.6693157214166158 2.3677934201387663 >10 4.667291682678769 31.37363397653874 >50 0.047170636555563625 1.2899044947871652 >100 0.018705597231520675 1.3044498849992492 >500 0.0024398605084592186 0.6737233507256262 >1k 0.0032531473446122915 2.2906593924671292 >5k 0.0012199302542296093 3.6566474720166426 >10k+ 4.0664341807653643E-4 1.7261063972683361 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTC 10799 1.7234775336667827 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7967 1.2715015752128214 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGC 7607 1.214047004222911 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCG 7303 1.1655298109425423 No Hit GAACTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCT 3305 0.5274648808934824 No Hit GCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 2745 0.4380911037980663 TruSeq Adapter, Index 20 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTT 1907 0.30434963021599726 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCT 1620 0.25854556945459656 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTC 1387 0.22135969434168234 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACGATACT 1228 0.19598392548780527 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACGATACTCGTA 1119 0.17858795816030462 No Hit CGCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTG 1020 0.1627879511380793 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTT 896 0.14299804335266572 No Hit CTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGCT 705 0.11251520152190775 TruSeq Adapter, Index 23 (95% over 22bp) CGTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCT 693 0.11060004915557739 No Hit CGTTCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTC 682 0.1088444928197746 No Hit CCTGTCTCTTATACACATCTGACGCGACGATACTCGTATGCCGTCTTCTGC 670 0.10692934045344424 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1919206105505743E-4 0.0 0.0 0.122250559384087 0.0 2 3.1919206105505743E-4 0.0 0.0 0.7885639868365194 0.0 3 3.1919206105505743E-4 0.0 0.0 1.1559540491108906 0.0 4 3.1919206105505743E-4 0.0 0.0 2.091825172124319 0.0 5 3.1919206105505743E-4 0.0 0.0 4.721967755217992 0.0 6 3.1919206105505743E-4 0.0 0.0 5.900584440663792 0.0 7 3.1919206105505743E-4 0.0 0.0 6.889601041842887 0.0 8 3.1919206105505743E-4 0.0 0.0 8.077793489120339 0.0 9 3.1919206105505743E-4 0.0 0.0 8.54014318955859 0.0 10 3.1919206105505743E-4 0.0 0.0 10.550893578174923 0.0 11 3.1919206105505743E-4 0.0 0.0 11.512459662103284 0.0 12 3.1919206105505743E-4 0.0 0.0 13.526721163391224 0.0 13 3.1919206105505743E-4 0.0 0.0 13.967684995738786 0.0 14 3.1919206105505743E-4 0.0 0.0 14.224315412827051 0.0 15 3.1919206105505743E-4 0.0 0.0 14.667992377693581 0.0 16 3.1919206105505743E-4 0.0 0.0 15.188754225304908 0.0 17 3.1919206105505743E-4 0.0 0.0 15.75436255749447 0.0 18 3.1919206105505743E-4 0.0 0.0 16.389714355024562 0.0 19 4.7878809158258614E-4 0.0 0.0 17.00336109240291 0.0 20 4.7878809158258614E-4 0.0 0.0 17.445282500933637 0.0 21 4.7878809158258614E-4 0.0 0.0 17.935082718622624 0.0 22 4.7878809158258614E-4 0.0 0.0 18.521438534780764 0.0 23 4.7878809158258614E-4 0.0 0.0 19.06087311796381 0.0 24 4.7878809158258614E-4 0.0 0.0 19.51348746053988 0.0 25 4.7878809158258614E-4 0.0 0.0 19.92428764311774 0.0 26 4.7878809158258614E-4 0.0 0.0 20.327746408291333 0.0 27 4.7878809158258614E-4 0.0 0.0 20.77174256521892 0.0 28 4.7878809158258614E-4 0.0 0.0 21.185734668407328 0.0 29 4.7878809158258614E-4 0.0 0.0 21.61297324212952 0.0 30 4.7878809158258614E-4 0.0 0.0 22.128628016763965 0.0 31 6.383841221101149E-4 0.0 0.0 22.567995888806255 0.0 32 6.383841221101149E-4 0.0 0.0 23.0094385092454 0.0 33 6.383841221101149E-4 0.0 0.0 23.456945778844588 0.0 34 6.383841221101149E-4 0.0 0.0 23.90030355165006 0.0 35 6.383841221101149E-4 0.0 0.0 24.33568152292916 0.0 36 6.383841221101149E-4 0.0 0.0 24.749514030087045 0.0 37 6.383841221101149E-4 0.0 0.0 25.178348564114515 0.0 38 6.383841221101149E-4 0.0 0.0 25.670383126230885 0.0 39 7.979801526376436E-4 0.0 0.0 26.285625823914508 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTGCG 30 2.1639153E-6 45.000004 1 TCTAGCG 40 6.8066583E-9 45.0 1 AGTGCGC 20 7.0308277E-4 45.0 13 TGTAACG 20 7.0308277E-4 45.0 1 AATCGCG 20 7.0308277E-4 45.0 1 GCGTAGT 25 3.8887683E-5 44.999996 18 CGTTTTT 4945 0.0 44.180992 1 CGATGAA 535 0.0 42.056072 19 CTAGCGG 65 0.0 41.53846 2 ACGACAC 55 6.002665E-11 40.909092 37 CGACACT 50 1.0804797E-9 40.499996 38 TACGAAT 50 1.0804797E-9 40.499996 12 CCGATGA 540 0.0 40.416664 18 CGCGGGT 45 1.925946E-8 40.0 4 CAACGAC 45 1.925946E-8 40.0 12 GCGCAAT 45 1.925946E-8 40.0 19 TACGGCT 950 0.0 39.55263 7 GGCTACG 40 3.4548611E-7 39.375 1 ACGGCTG 955 0.0 39.34555 8 TTTAGCG 35 6.243741E-6 38.571426 1 >>END_MODULE